Jonathan Warrell
Visiting Fellow
Research & Publications
Biography
News
Coauthors
Selected Publications
- Spatially informed gene signatures for response to immunotherapy in melanoma.Aung T, Warrell J, Martinez-Morilla S, Gavrielatou N, Vathiotis I, Yaghoobi V, Kluger H, Gerstein M, Rimm D. Spatially informed gene signatures for response to immunotherapy in melanoma. Clinical Cancer Research 2024 PMID: 38837895, DOI: 10.1158/1078-0432.ccr-23-3932.
- Abstract 1141: Spatial-specific gene signatures to predict immunotherapy outcomes in lung cancerAung T, Moutafi M, Trontzas I, Kulasinghe A, Monkman J, Gavrielatou N, Vathiotis I, Warrell J, Rimm D. Abstract 1141: Spatial-specific gene signatures to predict immunotherapy outcomes in lung cancer. Cancer Research 2024, 84: 1141-1141. DOI: 10.1158/1538-7445.am2024-1141.
- Latent evolutionary signatures: a general framework for analysing music and cultural evolutionWarrell J, Salichos L, Gancz M, Gerstein M. Latent evolutionary signatures: a general framework for analysing music and cultural evolution. Journal Of The Royal Society Interface 2024, 21: 20230647. PMID: 38503341, PMCID: PMC10950459, DOI: 10.1098/rsif.2023.0647.
- Insights from incorporating quantum computing into drug design workflowsLau B, Emani P, Chapman J, Yao L, Lam T, Merrill P, Warrell J, Gerstein M, Lam H. Insights from incorporating quantum computing into drug design workflows. Bioinformatics 2022, 39: btac789. PMID: 36477833, PMCID: PMC9825754, DOI: 10.1093/bioinformatics/btac789.
- 127 Spatial-specific gene signatures outperform bulk-mRNA signatures to define resistance to immunotherapy in melanoma patientsAung T, Warrell J, Martinez-Morilla S, Gavrielatou N, Vathiotis L, Chan N, Kluger H, Rimm D. 127 Spatial-specific gene signatures outperform bulk-mRNA signatures to define resistance to immunotherapy in melanoma patients. 2022, a140-a140. DOI: 10.1136/jitc-2022-sitc2022.0127.
- 133 Spatially defined gene signatures uncover the association of extracellular matrix genes with immunotherapy resistance in head and neck squamous cell carcinomaGavrielatou N, Warrell J, Aung T, Vathiotis L, Economopoulou P, Burtness B, Psyrri A, Rimm D. 133 Spatially defined gene signatures uncover the association of extracellular matrix genes with immunotherapy resistance in head and neck squamous cell carcinoma. 2022, a146-a146. DOI: 10.1136/jitc-2022-sitc2022.0133.
- Interrogating RNA and protein spatial subcellular distribution in smFISH data with DypFISHSavulescu A, Brackin R, Bouilhol E, Dartigues B, Warrell J, Pimentel M, Beaume N, Fortunato I, Dallongeville S, Boulle M, Soueidan H, Agou F, Schmoranzer J, Olivo-Marin J, Franco C, Gomes E, Nikolski M, Mhlanga M. Interrogating RNA and protein spatial subcellular distribution in smFISH data with DypFISH. Cell Reports Methods 2021, 1: 100068. PMID: 35474672, PMCID: PMC9017151, DOI: 10.1016/j.crmeth.2021.100068.
- Cyclic and multilevel causation in evolutionary processesWarrell J, Gerstein M. Cyclic and multilevel causation in evolutionary processes. Biology & Philosophy 2020, 35: 50. DOI: 10.1007/s10539-020-09753-3.