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Junjie Guo, PhD

Associate Professor of Neuroscience
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Additional Titles

co-Director of Graduate Studies, Interdepartmental Neuroscience Program

Education

PhD
Johns Hopkins University School of Medicine, Neuroscience (2011)


BA
Peking University, Biology (2006)


About

Titles

Associate Professor of Neuroscience

co-Director of Graduate Studies, Interdepartmental Neuroscience Program

Biography

Junjie Guo received his B.A. in Biology from Peking University and completed his Ph.D. thesis in the Solomon H. Snyder Department of Neuroscience at Johns Hopkins University School of Medicine, working on neuronal DNA methylation. During his postdoctoral training at the Whitehead Institute/MIT, he developed a series of high-throughput computational and experimental methods to investigate circular RNAs and intracellular RNA folding. He joined the Department of Neuroscience at Yale School of Medicine in Fall 2017.

The Guo lab is broadly interested in the molecular mechanisms underlying post-transcriptional gene regulation in neuronal homeostasis, brain aging, and neurological disorder. Current work in the lab employs biochemistry, cell biology, genetics, and functional genomics approaches to investigate the roles of RNA and RNA-binding protein dysregulation in amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD).

Last Updated on December 14, 2025.

Appointments

Education & Training

Postdoctoral Fellow
Whitehead Institute/MIT/HHMI (2017)
PhD
Johns Hopkins University School of Medicine, Neuroscience (2011)
BA
Peking University, Biology (2006)

Research

Overview

1. RNA dysregulation in neurodegenerative diseases

An increasing number of neurodegenerative diseases, including amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), have been linked to the instability and expansion of nucleotide repeat sequences in the genome. These mutations can interfere with gene expression and cause neurotoxicity through a variety of mechanisms. We apply molecular and genomic approaches in patient-derived stem cells and neuronal models to investigate these mechanisms and how they impact diseases, with the goal of developing novel therapeutics.

Read more:

Yang S et al, Aberrant splicing exonizes C9orf72 repeat expansion in ALS/FTD. Nat Neurosci. 2025 Oct;28(10):2034-2043. doi: 10.1038/s41593-025-02039-5. PMID: 40790269

Yang S, Lei Z, Guo JU. TDP-43 loss brings RNA to a twist ending. Nat Neurosci. 2025 Nov;28(11):2176-2177. doi: 10.1038/s41593-025-02065-3.PMID: 41120749

Sun Y, et al, C9orf72 arginine-rich dipeptide repeats inhibit UPF1-mediated RNA decay via translational repression. Nat Commun. 2020 Jul 3;11(1):3354. doi: 10.1038/s41467-020-17129-0.PMID: 32620797

2. Noncanonical mRNA translation in neuronal development and functions

In contrast to the "one mRNA, one protein" dogma, some cellular and viral mRNAs can encode more than one protein isoform. We have recently discovered that mRNAs encoding synaptic organizers, including neuronal pentraxin receptor (NPR) and C1q-like protein family, can produce two distinctly localized protein isoforms by having two alternative translation initiation sites. Using primary neurons and genetically engineered mouse models, we are identifying novel roles of alternative mRNA translation in generating diverse synaptic protein isoforms to support neural circuit functions.

Read more:

Lee PJ et al, Alternative translation initiation produces synaptic organizer proteoforms with distinct localization and functions. Mol Cell. 2024 Oct 17;84(20):3967-3978.e8. doi: 10.1016/j.molcel.2024.08.032. Epub 2024 Sep 23.PMID: 39317199

Sun Y et al, Restriction of SARS-CoV-2 replication by targeting programmed -1 ribosomal frameshifting. PNAS. 2021 Jun 29;118(26):e2023051118. doi: 10.1073/pnas.2023051118.PMID: 34185680

Wei LH, Guo JU. Coding functions of "noncoding" RNAs. Science. 2020 Mar 6;367(6482):1074-1075. doi: 10.1126/science.aba6117.PMID: 32139529

Medical Research Interests

Aging; Amyotrophic Lateral Sclerosis; Animal Experimentation; Computational Biology; Frontotemporal Dementia; Genomics; Induced Pluripotent Stem Cells; Motor Neuron Disease; Neurodegenerative Diseases; Neurons; RNA; RNA-Binding Proteins; TDP-43 Proteinopathies

Publications

2025

2024

2023

2022

2021

2020

Academic Achievements & Community Involvement

Honors

  • honor

    NARSAD Young Investigator

  • honor

    Yale Scholar in Neurodegenerative Research

  • honor

    Damon Runyon Postdoctoral Fellowship

  • honor

    Harold M. Weintraub Graduate Student Award

Teaching & Mentoring

Teaching

  • Didactic

    INP 701: Principles of Neuroscience

    Co-InstructorLecture Setting
  • Didactic

    INP 702: Foundations of Cellular and Molecular Neurobiology

    LecturerLecture Setting

Mentoring

  • Longyue Wang

    Postgrad associate
    2024 - Present
  • Denethi Wijegunawardana

    Graduate student
    2023 - Present
  • Zhen Lei

    Postdoc
    2023 - Present
  • Ata Isiktas

    Graduate student
    2022 - Present

Get In Touch

Contacts

Academic Office Number

Locations

Events

Jun 20261Monday