Frederick Sigworth, PhD
Professor Emeritus of Cellular and Molecular PhysiologyCards
Appointments
Contact Info
Cellular & Molecular Physiology
PO Box 208026, 333 Cedar Street
New Haven, CT 06520-8026
United States
About
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Titles
Professor Emeritus of Cellular and Molecular Physiology
Biography
Fred Sigworth studied applied physics at Caltech and was a graduate student at Yale, working in the neuroscience laboratory of Charles F. Stevens. He received the PhD in physiology from Yale in 1979 and was a postdoc in the laboratory of Erwin Neher in Göttingen, Germany where he was a co-developer of patch-clamp techniques for single-channel electrophysiology. He returned to Yale as a faculty member at Yale in 1984. His current research is in the structural biology of ion-channel proteins, making use of novel cryo-EM methods. "How do I see the scientific enterprise? An old book puts it this way: one generation commends God's works to another. It is a great privilege to unravel the workings of ion channels, and to pass on the excitement about these molecular machines to students, colleagues and anyone else who will listen!"
Appointments
Cellular & Molecular Physiology
EmeritusPrimary
Other Departments & Organizations
Education & Training
- PhD
- Yale University (1979)
Research
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Overview
My research work centers on the structure and function of ion channels, which are membrane proteins that selectively control the passage of ions across cell membranes. The activity of ion channels is central to very many physiological processes, including synaptic transmission and impulse propagation in the nervous system, the control of cardiac function and vascular resistance, salt and water transport in epithelia, and the control of hormone secretion.
Central to the understanding of ion channel function is the characterization of the stochastic 'gating' behavior of single channels. We are particularly interested in the 'voltage sensor' of voltage-gated potassium channels, and how it couples the transmembrane potential to channel gating. Towards an understanding of this protein structure, we are pursuing studies using electron cryo-microscopy (cryo-EM) of voltage-gated channel proteins. Electron microscopes have sufficient resolution to provide atomic-detail images, but radiation damage by the electron beam precludes structure determination from a single molecule. Instead, images from many individual protein molecules must be combined to yield even low-resolution structural information. Working with potassium channels reconstituted into lipid vesicles, we use novel specimen substrates and single-particle image processing methods to obtain the three-dimensional structure of these proteins in their various states.
The process of obtaining 3D protein structures from electron micrographs is a very interesting mathematical problem. We are pursuing new approaches to make this process more reliable and able to work on smaller protein particles (like ion channels) than those investigated in the past.
Medical Research Interests
Research at a Glance
Yale Co-Authors
Publications Timeline
Research Interests
Henry J. Binder, MD
Richard Goodman
Ion Channels
Electrophysiology
Patch-Clamp Techniques
Potassium Channels
Sodium Channels
Xenopus
Publications
2016
Statistical modeling and removal of lipid membrane projections for cryo-EM structure determination of reconstituted membrane proteins
Jensen KH, Brandt SS, Shigematsu H, Sigworth FJ. Statistical modeling and removal of lipid membrane projections for cryo-EM structure determination of reconstituted membrane proteins. Journal Of Structural Biology 2016, 194: 49-60. PMID: 26835990, PMCID: PMC4866491, DOI: 10.1016/j.jsb.2016.01.012.Peer-Reviewed Original ResearchCitationsMeSH Keywords and Concepts
2013
Quantifying the local resolution of cryo-EM density maps
Kucukelbir A, Sigworth FJ, Tagare HD. Quantifying the local resolution of cryo-EM density maps. Nature Methods 2013, 11: 63-65. PMID: 24213166, PMCID: PMC3903095, DOI: 10.1038/nmeth.2727.Peer-Reviewed Original ResearchCitationsAltmetric
2010
A rail-to-rail operational amplifier in silicon-on-sapphire with constant transconductance
Weerakoon P, Sigworth F, Kindlmann P, Culurciello E. A rail-to-rail operational amplifier in silicon-on-sapphire with constant transconductance. Analog Integrated Circuits And Signal Processing 2010, 65: 311-319. DOI: 10.1007/s10470-010-9484-6.Peer-Reviewed Original ResearchCitationsConceptsEntire common mode rangeConstant transconductanceRail operational amplifierInput-referred voltage noiseCommon-mode rangeElectrical measurement resultsInput-referred offsetHigh-performance amplifiersMW of powerGain-bandwidth productOpen-loop gainMm2 of areaRail inputSOI technologySapphire (SOS) technologyOutput swingBiomedical instrumentationOperational amplifierVoltage noiseMeasurement resultsAmplifierTransconductanceSiliconRailFabrication
2009
Structure of the BK potassium channel in a lipid membrane from electron cryomicroscopy
Wang L, Sigworth FJ. Structure of the BK potassium channel in a lipid membrane from electron cryomicroscopy. Nature 2009, 461: 292-295. PMID: 19718020, PMCID: PMC2797367, DOI: 10.1038/nature08291.Peer-Reviewed Original ResearchCitationsAltmetricMeSH Keywords and ConceptsConceptsVoltage sensor domainNative membrane environmentMembrane proteinsMembrane environmentChannel voltage-sensor domainElectron cryomicroscopyVoltage-activated potassium channelsSingle-particle electron cryomicroscopyIndividual protein particlesPotassium channelsBK potassium channelsLarge conductance calciumLipid membranesX-ray crystal structureBK channelsStructural studiesProtein particlesProteinCryomicroscopyCrystal structureFormation of crystalsDomainStructureCrystalsChannels
2008
Integrated patch-clamp biosensor for high-density screening of cell conductance
Weerakoon P, Sigworth F, Culurciello E. Integrated patch-clamp biosensor for high-density screening of cell conductance. Electronics Letters 2008, 44: 81-82. DOI: 10.1049/el:20083151.Peer-Reviewed Original ResearchCitations
2007
Ca-aktivierte K-Kanäle mittlerer Leitfähigkeit (IK): Klonierung und funktionelle Charakterisierung unterschiedlicher Isoformen in der apikalen und basolateralen Membran von Kolonepithelzellen
Barmeyer C, Rahner C, Yang Y, Sigworth F, Binder H, Rajendran V. Ca-aktivierte K-Kanäle mittlerer Leitfähigkeit (IK): Klonierung und funktionelle Charakterisierung unterschiedlicher Isoformen in der apikalen und basolateralen Membran von Kolonepithelzellen. Zeitschrift Für Gastroenterologie 2007, 45 DOI: 10.1055/s-2007-988400.Peer-Reviewed Original Research
2006
Using cryo-EM to measure the dipole potential of a lipid membrane
Wang L, Bose PS, Sigworth FJ. Using cryo-EM to measure the dipole potential of a lipid membrane. Proceedings Of The National Academy Of Sciences Of The United States Of America 2006, 103: 18528-18533. PMID: 17116859, PMCID: PMC1693696, DOI: 10.1073/pnas.0608714103.Peer-Reviewed Original ResearchCitationsMeSH Keywords and ConceptsConceptsDipole potentialLipid membranesPhase-contrast imagingMolecular dynamics calculationsLipid bilayer membranesIon translocation ratesAtomic potentialLipid moleculesLipid monolayersBilayer membranesDynamics calculationsProbe methodSurface potentialAnionsDiphytanoylphosphatidylcholineCationsElectronsImage intensityAbsolute valueMembraneMoleculesConformationLarge permeabilityMonolayersBilayers
2002
Applying Hidden Markov Models to the Analysis of Single Ion Channel Activity
Venkataramanan L, Sigworth F. Applying Hidden Markov Models to the Analysis of Single Ion Channel Activity. Biophysical Journal 2002, 82: 1930-1942. PMID: 11916851, PMCID: PMC1301989, DOI: 10.1016/s0006-3495(02)75542-2.Peer-Reviewed Original ResearchCitationsMeSH Keywords and ConceptsConceptsCorrelated background noiseHidden Markov ModelDigital inverse filterMarkov model parametersDiscrete timeBaum-Welch algorithmMarkov modelComputational intensityDeterministic interferenceModel parametersInverse filterMultiple data setsAlgorithmPrevious resultsPractical applicationsNoise ratioState transitionsSharp frequencyData setsChannel dataSingle ion channel currentsNoiseExtensionRandomnessBackground noise
2000
Identification of hidden Markov models for ion channel currents .III. Bandlimited, sampled data
Venkataramanan L, Kuc R, Sigworth F. Identification of hidden Markov models for ion channel currents .III. Bandlimited, sampled data. IEEE Transactions On Signal Processing 2000, 48: 376-385. DOI: 10.1109/78.823965.Peer-Reviewed Original ResearchCitations
1999
Two-Microelectrode Voltage Clamp of Xenopus Oocytes: Voltage Errors and Compensation for Local Current Flow
Baumgartner W, Islas L, Sigworth F. Two-Microelectrode Voltage Clamp of Xenopus Oocytes: Voltage Errors and Compensation for Local Current Flow. Biophysical Journal 1999, 77: 1980-1991. PMID: 10512818, PMCID: PMC1300479, DOI: 10.1016/s0006-3495(99)77039-6.Peer-Reviewed Original ResearchCitationsMeSH Keywords and Concepts
Academic Achievements & Community Involvement
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Honors
honor Fellow
12/29/2023National AwardAmerican Association for the Advancement of Science (AAAS)DetailsUnited Stateshonor Member
05/02/2016National AwardNational Academy of SciencesDetailsUnited Stateshonor Bohmfalk Teaching Prize
01/01/2002Yale School of Medicine AwardYale School of MedicineDetailsUnited Stateshonor K. C. Cole Award
01/01/1997National AwardBiophysical SocietyDetailsUnited Stateshonor Yale Science and Engineering Award
01/01/1996Yale University AwardYale UniversityDetailsUnited States
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Cellular & Molecular Physiology
PO Box 208026, 333 Cedar Street
New Haven, CT 06520-8026
United States
Locations
Sterling Hall of Medicine, B-Wing
Academic Office
333 Cedar Street, Ste BE25A
New Haven, CT 06510
Business Office
203.785.2989