Taylor Adams

2025

• Keratinocytes as active regulators of cutaneous and mucosal immunity: a systematic review across inflammatory epithelial disorders

  Klimitz F, Shen Y, Repetto F, Brown S, Knoedler L, Ko C, Abu Hussein N, Crisler W, Adams T, Kaminski N, Lian C, Murphy G, Hsia H, Pomahac B, Kauke-Navarro M. Keratinocytes as active regulators of cutaneous and mucosal immunity: a systematic review across inflammatory epithelial disorders. Frontiers In Immunology 2025, 16: 1694066. DOI: 10.3389/fimmu.2025.1694066.

  Peer-Reviewed Original Research

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• Single-cell analysis of cryobiopsy samples from patients with early IPF reveals loss of alveolar epithelial cells, and emergence of aberrant basaloid cells

  Justet A, Adams T, Khoury J, Balayev A, Schupp J, Manning E, Zhao A, Ahangari F, Yan X, Ravaglia C, Poletti V, Tomasseti S, Kaminski N. Single-cell analysis of cryobiopsy samples from patients with early IPF reveals loss of alveolar epithelial cells, and emergence of aberrant basaloid cells. 2025, oa1196. DOI: 10.1183/13993003.congress-2025.oa1196.

  Peer-Reviewed Original Research

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• Spatial Transcriptomics Profiling and Bulk RNA Sequencing to Assess Niches in End-Stage Silicosis

  Abu Hussein N, Adams T, Anderson S, Kramer M, Nikola F, Robert R, Najjar A, Sharma P, Yang L, Zhang Y, Yan X, Pertzov B, Kaminski N. Spatial Transcriptomics Profiling and Bulk RNA Sequencing to Assess Niches in End-Stage Silicosis. 2025, pa6335. DOI: 10.1183/13993003.congress-2025.pa6335.

  Peer-Reviewed Original Research

• A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases

  Zheng Y, Schupp J, Adams T, Clair G, Justet A, Ahangari F, Yan X, Hansen P, Carlon M, Cortesi E, Vermant M, Vos R, De Sadeleer L, Rosas I, Pineda R, Sembrat J, Königshoff M, McDonough J, Vanaudenaerde B, Wuyts W, Kaminski N, Ding J. A deep generative model for deciphering cellular dynamics and in silico drug discovery in complex diseases. Nature Biomedical Engineering 2025, 9: 2155-2180. PMID: 40542107, PMCID: PMC12705450, DOI: 10.1038/s41551-025-01423-7.

  Peer-Reviewed Original Research

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• Understanding and Reducing Cardiopulmonary Sequelae Associated With Chronic Hypoxia

  Manning E, Ramachandra A, Sharma P, Nikola F, De Man R, Doddaballapur P, Raredon M, Szafron J, Baernthaler T, Justet A, Akingbesote N, Perry R, Adams T, Cavinato C, Yan X, Tellides G, Kaminski N, Humphrey J. Understanding and Reducing Cardiopulmonary Sequelae Associated With Chronic Hypoxia. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a3336-a3336. DOI: 10.1164/ajrccm.2025.211.abstracts.a3336.

  Peer-Reviewed Original Research

• The Potential Role of miR205 and miR205HG in Pulmonary Fibrosis

  Anderson S, Johad K, Ahangari F, Justet A, Adams T, Yan X, Kaminski N. The Potential Role of miR205 and miR205HG in Pulmonary Fibrosis. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a4662-a4662. DOI: 10.1164/ajrccm.2025.211.abstracts.a4662.

  Peer-Reviewed Original Research

• Early IPF Is Characterized by a Dramatic Shift of the Epithelial and Endothelial Populations Within the Alveolar Niche

  Justet A, Adams T, Khoury J, Balayev A, Abu Hussein N, Schupp J, Zhao A, Manning E, Ahangari F, Yan X, Ravaglia C, Tomassetti S, Poletti V, Kaminski N. Early IPF Is Characterized by a Dramatic Shift of the Epithelial and Endothelial Populations Within the Alveolar Niche. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a7109-a7109. DOI: 10.1164/ajrccm.2025.211.abstracts.a7109.

  Peer-Reviewed Original Research

• The Potential Role of GPR87 in the Development of Pulmonary Fibrosis

  Khoury J, Ahangari F, Justet A, Adams T, Manning E, Mcdonough J, Anderson S, Nekola F, Beermann M, Bauer Y, Gomez J, Kaminski N. The Potential Role of GPR87 in the Development of Pulmonary Fibrosis. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a7110-a7110. DOI: 10.1164/ajrccm.2025.211.abstracts.a7110.

  Peer-Reviewed Original Research

• Single-cell Analysis Reveals Somatic Mutation Accumulation, Loss of Differentiation, and Increased Transcriptional Entropy in Aged Human Lungs

  De Man R, Cala Garcia J, Adams T, Nekola F, Moss B, Waich A, Rangel R, Anderson S, Mcdonough J, Raredon M, Yan X, Rosas I, Kaminski N. Single-cell Analysis Reveals Somatic Mutation Accumulation, Loss of Differentiation, and Increased Transcriptional Entropy in Aged Human Lungs. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a5278-a5278. DOI: 10.1164/ajrccm.2025.211.abstracts.a5278.

  Peer-Reviewed Original Research

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• The Human Proximal Pulmonary Artery Plays a Critical Role in Regulating Cardiopulmonary Function in Health and Disease

  Manning E, Lee S, Ashadujjaman M, De Man R, Cai Z, Adams T, Raredon M, Ramachandra A, Cavinato C, Heerdt P, Singh I, Choudhary G, Yan X, Bellini C, Tellides G, Humphrey J, Kaminski N. The Human Proximal Pulmonary Artery Plays a Critical Role in Regulating Cardiopulmonary Function in Health and Disease. American Journal Of Respiratory And Critical Care Medicine 2025, 211: a2891-a2891. DOI: 10.1164/ajrccm.2025.211.abstracts.a2891.

  Peer-Reviewed Original Research

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