Joseph Brancale, MD, PhD
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Hospital Resident
Biography
Joseph Brancale is an internal medicine resident in the physician scientist pathway whose research focuses on uncovering the genetic mechanisms that drive rare and complex liver diseases. He received his PhD in the lab of Dr. Silvia Vilarinho. His prior work integrates in silico genomic discovery and single-cell approaches, in vitro systems such as iPSCs and organoids, and in vivo mouse modeling to connect genetic findings with functional biology. By combining computational analysis with experimental validation, he seeks to define how cellular pathways become disrupted in disease and to establish frameworks that can guide both diagnosis and therapeutic development in hepatology.
Last Updated on June 13, 2026.
Departments & Organizations
Education & Training
- MD
- Yale School Medicine (2026)
- PhD
- Yale Graduate School of Arts & Sciences, Genetics (2025)
- AB
- Harvard University, Organismic and Evolutionary Biology (2013)
Research
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Overview
Medical Research Interests
Cholestasis, Intrahepatic; Genetics; Hypertension, Portal; Liver Diseases; Non-alcoholic Fatty Liver Disease; Obesity; Single-Cell Analysis
ORCID
0000-0002-1948-5103
Research at a Glance
Yale Co-Authors
Frequent collaborators of Joseph Brancale's published research.
Publications Timeline
A big-picture view of Joseph Brancale's research output by year.
Research Interests
Research topics Joseph Brancale is interested in exploring.
Silvia Vilarinho, MD, PhD
Dhanpat Jain, MD, MBBS
Yasuko Iwakiri, PhD
12Publications
1,395Citations
Single-Cell Analysis
Non-alcoholic Fatty Liver Disease
Hypertension, Portal
Obesity
Publications
2026
Dynamic remodeling of portal vessels by Clec4g+ endothelial cells in liver growth and homeostasis
Platt S, Mohammed N, Brancale J, Tippett C, Seo K, Vilarinho S. Dynamic remodeling of portal vessels by Clec4g+ endothelial cells in liver growth and homeostasis. JCI Insight 2026, 11: e201391. PMID: 42154527, PMCID: PMC13313477, DOI: 10.1172/jci.insight.201391.Peer-Reviewed Original ResearchAltmetric
2025
Genome-wide meta-analysis identifies nine loci associated with higher risk of hepatocellular carcinoma development
Ghouse J, Gellert-Kristensen H, O’Rourke C, Seidelin A, Thorleifsson G, Sveinbjörnsson G, Tragante V, Konkwo C, Brancale J, Vilarinho S, Eyrich T, Ahlberg G, Bundgaard J, Rand S, Lundegaard P, Sørensen E, Mikkelsen C, Træholt J, Erikstrup C, Dinh K, Bruun M, Jensen B, Bay J, Brunak S, Banasik K, Ullum H, Consortium E, Laisk T, Mägi R, Nadauld L, Knowlton K, Knight S, Gluud L, Vistisen K, Björnsson E, Ulfarsson M, Sulem P, Holm H, Pedersen O, Ostrowski S, Gudbjartsson D, Rafnar T, Stefansson K, Lassen U, Pommergaard H, Hillingsø J, Andersen J, Bundgaard H, Stender S. Genome-wide meta-analysis identifies nine loci associated with higher risk of hepatocellular carcinoma development. JHEP Reports 2025, 7: 101485. PMID: 40823170, PMCID: PMC12355075, DOI: 10.1016/j.jhepr.2025.101485.Peer-Reviewed Original ResearchCitationsAltmetric
2024
Integrative common and rare variant analyses provide insights into the genetic architecture of liver cirrhosis
Ghouse J, Sveinbjörnsson G, Vujkovic M, Seidelin A, Gellert-Kristensen H, Ahlberg G, Tragante V, Rand S, Brancale J, Vilarinho S, Lundegaard P, Sørensen E, Erikstrup C, Bruun M, Jensen B, Brunak S, Banasik K, Ullum H, Verweij N, Lotta L, Baras A, Mirshahi T, Carey D, Kaplan D, Lynch J, Morgan T, Schwantes-An T, Dochtermann D, Pyarajan S, Tsao P, Laisk T, Mägi R, Kozlitina J, Tybjærg-Hansen A, Jones D, Knowlton K, Nadauld L, Ferkingstad E, Björnsson E, Ulfarsson M, Sturluson Á, Sulem P, Pedersen O, Ostrowski S, Gudbjartsson D, Stefansson K, Olesen M, Chang K, Holm H, Bundgaard H, Stender S. Integrative common and rare variant analyses provide insights into the genetic architecture of liver cirrhosis. Nature Genetics 2024, 56: 827-837. PMID: 38632349, PMCID: PMC11096111, DOI: 10.1038/s41588-024-01720-y.Peer-Reviewed Original ResearchCitationsAltmetricMeSH KeywordsAlanine TransaminaseCarcinoma, HepatocellularCase-Control StudiesCohort StudiesFemalegamma-GlutamyltransferaseGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyHumansLipaseLiver CirrhosisLiver NeoplasmsMaleMembrane ProteinsMultifactorial InheritancePolymorphism, Single NucleotideRisk Factors
2023
Protocol for enrichment, purification, and cytocentrifugation of mouse liver endothelial cells
Chowdhury S, Fried K, Iwakiri Y, Brancale J, Vilarinho S. Protocol for enrichment, purification, and cytocentrifugation of mouse liver endothelial cells. STAR Protocols 2023, 4: 102480. PMID: 37515764, PMCID: PMC10400957, DOI: 10.1016/j.xpro.2023.102480.Peer-Reviewed Original ResearchCitations
2022
Fulminant Viral Hepatitis in Two Siblings with Inherited IL-10RB Deficiency
Korol C, Belkaya S, Alsohime F, Lorenzo L, Boisson-Dupuis S, Brancale J, Neehus A, Vilarinho S, Zobaida A, Halwani R, Al-Muhsen S, Casanova J, Jouanguy E. Fulminant Viral Hepatitis in Two Siblings with Inherited IL-10RB Deficiency. Journal Of Clinical Immunology 2022, 43: 406-420. PMID: 36308662, PMCID: PMC9892130, DOI: 10.1007/s10875-022-01376-5.Peer-Reviewed Original ResearchCitationsAltmetricA multiancestry genome-wide association study of unexplained chronic ALT elevation as a proxy for nonalcoholic fatty liver disease with histological and radiological validation
Vujkovic M, Ramdas S, Lorenz KM, Guo X, Darlay R, Cordell HJ, He J, Gindin Y, Chung C, Myers RP, Schneider CV, Park J, Lee KM, Serper M, Carr RM, Kaplan DE, Haas ME, MacLean MT, Witschey WR, Zhu X, Tcheandjieu C, Kember RL, Kranzler HR, Verma A, Giri A, Klarin DM, Sun YV, Huang J, Huffman JE, Creasy KT, Hand NJ, Liu CT, Long MT, Yao J, Budoff M, Tan J, Li X, Lin HJ, Chen YI, Taylor KD, Chang RK, Krauss RM, Vilarinho S, Brancale J, Nielsen JB, Locke AE, Jones MB, Verweij N, Baras A, Reddy KR, Neuschwander-Tetri BA, Schwimmer JB, Sanyal AJ, Chalasani N, Ryan KA, Mitchell BD, Gill D, Wells AD, Manduchi E, Saiman Y, Mahmud N, Miller DR, Reaven PD, Phillips LS, Muralidhar S, DuVall SL, Lee JS, Assimes TL, Pyarajan S, Cho K, Edwards TL, Damrauer SM, Wilson PW, Gaziano JM, O’Donnell C, Khera AV, Grant SFA, Brown CD, Tsao PS, Saleheen D, Lotta LA, Bastarache L, Anstee QM, Daly AK, Meigs JB, Rotter JI, Lynch JA, Rader D, Voight B, Chang K. A multiancestry genome-wide association study of unexplained chronic ALT elevation as a proxy for nonalcoholic fatty liver disease with histological and radiological validation. Nature Genetics 2022, 54: 761-771. PMID: 35654975, PMCID: PMC10024253, DOI: 10.1038/s41588-022-01078-z.Peer-Reviewed Original ResearchCitationsAltmetric
2021
Genetic Variation in the Mitochondrial Glycerol‐3‐Phosphate Acyltransferase Is Associated With Liver Injury
Hakim A, Moll M, Brancale J, Liu J, Lasky‐Su J, Silverman EK, Vilarinho S, Jiang ZG, Pita‐Juárez Y, Vlachos IS, Zhang X, Åberg F, Afdhal NH, Hobbs BD, Cho MH. Genetic Variation in the Mitochondrial Glycerol‐3‐Phosphate Acyltransferase Is Associated With Liver Injury. Hepatology 2021, 74: 3394-3408. PMID: 34216018, PMCID: PMC8639615, DOI: 10.1002/hep.32038.Peer-Reviewed Original ResearchCitationsAltmetricA single cell gene expression atlas of 28 human livers
Brancale J, Vilarinho S. A single cell gene expression atlas of 28 human livers. Journal Of Hepatology 2021, 75: 219-220. PMID: 34016468, PMCID: PMC8345231, DOI: 10.1016/j.jhep.2021.03.005.Peer-Reviewed Original ResearchCitationsAltmetricGIMAP5 maintains liver endothelial cell homeostasis and prevents portal hypertension
Drzewiecki K, Choi J, Brancale J, Leney-Greene MA, Sari S, Dalgiç B, Aksu A, Şahin G, Ozen A, Baris S, Karakoc-Aydiner E, Jain D, Kleiner D, Schmalz M, Radhakrishnan K, Zhang J, Hoebe K, Su HC, Pereira JP, Lenardo MJ, Lifton RP, Vilarinho S. GIMAP5 maintains liver endothelial cell homeostasis and prevents portal hypertension. Journal Of Experimental Medicine 2021, 218: e20201745. PMID: 33956074, PMCID: PMC8105721, DOI: 10.1084/jem.20201745.Peer-Reviewed Original ResearchCitationsAltmetric
2019
Polygenic Prediction of Weight and Obesity Trajectories from Birth to Adulthood
Khera AV, Chaffin M, Wade KH, Zahid S, Brancale J, Xia R, Distefano M, Senol-Cosar O, Haas ME, Bick A, Aragam KG, Lander ES, Smith GD, Mason-Suares H, Fornage M, Lebo M, Timpson NJ, Kaplan LM, Kathiresan S. Polygenic Prediction of Weight and Obesity Trajectories from Birth to Adulthood. Cell 2019, 177: 587-596.e9. PMID: 31002795, PMCID: PMC6661115, DOI: 10.1016/j.cell.2019.03.028.Peer-Reviewed Original ResearchCitationsAltmetric
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