Data-Dependent Acquisition Ladder for Capillary Electrophoresis Mass Spectrometry-Based Ultrasensitive (Neuro)Proteomics
Choi S, Muñoz-LLancao P, Manzini M, Nemes P. Data-Dependent Acquisition Ladder for Capillary Electrophoresis Mass Spectrometry-Based Ultrasensitive (Neuro)Proteomics. Analytical Chemistry 2021, 93: 15964-15972. PMID: 34812615, DOI: 10.1021/acs.analchem.1c03327.Peer-Reviewed Original ResearchConceptsData-dependent acquisitionHigh-resolution mass spectrometryTraditional data-dependent acquisitionAnalytical toolbox of neuroscienceCE-ESIElectrospray ionizationUltrasensitive proteomicsDynamic exclusionMass spectrometryPeptide signalsReplicate measurementsTrace amountsNeuronal marker genesIdentification success rateAnalytical toolboxIdentified proteinsNonredundant proteinsData acquisition strategyMarker genesProtein digestibilityProteinNeurobiological importanceMolecular pathwaysCultured hippocampalIonization