2024
A variational graph-partitioning approach to modeling protein liquid-liquid phase separation
Wang G, Warrell J, Zheng S, Gerstein M. A variational graph-partitioning approach to modeling protein liquid-liquid phase separation. Cell Reports Physical Science 2024, 5: 102292. DOI: 10.1016/j.xcrp.2024.102292.Peer-Reviewed Original ResearchLatent evolutionary signatures: a general framework for analysing music and cultural evolution
Warrell J, Salichos L, Gancz M, Gerstein M. Latent evolutionary signatures: a general framework for analysing music and cultural evolution. Journal Of The Royal Society Interface 2024, 21: 20230647. PMID: 38503341, PMCID: PMC10950459, DOI: 10.1098/rsif.2023.0647.Peer-Reviewed Original ResearchConceptsDomain of musicModeling musical styleCultural processes of changeChord transitionsMusical corporaMusical piecesMusical stylesGenre predictionPrinciples of organizationSongMusicCultural processesCultural evolutionProcess of changeRepresentationGenreDeep generative architecturePiecesStyleHarmonyGenerator architectureEvolutionary spaceLatent embeddingsLatent spaceVariational autoencoder
2003
MolMovDB: analysis and visualization of conformational change and structural flexibility
Echols N, Milburn D, Gerstein M. MolMovDB: analysis and visualization of conformational change and structural flexibility. Nucleic Acids Research 2003, 31: 478-482. PMID: 12520056, PMCID: PMC165551, DOI: 10.1093/nar/gkg104.Peer-Reviewed Original Research