2017
Genomic analyses of African Trypanozoon strains to assess evolutionary relationships and identify markers for strain identification
Richardson JB, Lee KY, Mireji P, Enyaru J, Sistrom M, Aksoy S, Zhao H, Caccone A. Genomic analyses of African Trypanozoon strains to assess evolutionary relationships and identify markers for strain identification. PLOS Neglected Tropical Diseases 2017, 11: e0005949. PMID: 28961238, PMCID: PMC5636163, DOI: 10.1371/journal.pntd.0005949.Peer-Reviewed Original ResearchConceptsAfrican trypanosomesHigh genetic similarityMaximum likelihood phylogenyStrain identificationGenomic resourcesGenetic structureEvolutionary relationshipsGenetic clustersPhylogenetic analysisGenomic analysisSingle nucleotide polymorphismsTaxonomic classificationGenetic similarityLarge comparative analysisGenetic markersHigh similarityGeographic originEvansi strainsSNPsNucleotide polymorphismsT. brucei bruceiPhylogenyTrypanosomesTrypanosomaTrypanozoon
2015
Description of a New Galapagos Giant Tortoise Species (Chelonoidis; Testudines: Testudinidae) from Cerro Fatal on Santa Cruz Island
Poulakakis N, Edwards D, Chiari Y, Garrick R, Russello M, Benavides E, Watkins-Colwell G, Glaberman S, Tapia W, Gibbs J, Cayot L, Caccone A. Description of a New Galapagos Giant Tortoise Species (Chelonoidis; Testudines: Testudinidae) from Cerro Fatal on Santa Cruz Island. PLOS ONE 2015, 10: e0138779. PMID: 26488886, PMCID: PMC4619298, DOI: 10.1371/journal.pone.0138779.Peer-Reviewed Original ResearchConceptsMultiple independent evolutionary lineagesGiant tortoise speciesIndependent evolutionary lineagesCompelling genetic evidenceGalapagos tortoisesRank of speciesSanta Cruz IslandGenetic distinctivenessAnalysis of DNAEvolutionary lineagesEvolutionary relationshipsNatural populationsDNA charactersDistinct lineagesIsland of originTaxonomic revisionMorphological charactersMuseum specimensNew speciesGenetic evidenceTortoise speciesLineagesSpeciesTortoisesType specimen
1999
Origin and evolutionary relationships of giant Galápagos tortoises
Caccone A, Gibbs J, Ketmaier V, Suatoni E, Powell J. Origin and evolutionary relationships of giant Galápagos tortoises. Proceedings Of The National Academy Of Sciences Of The United States Of America 1999, 96: 13223-13228. PMID: 10557302, PMCID: PMC23929, DOI: 10.1073/pnas.96.23.13223.Peer-Reviewed Original ResearchGiant Galápagos tortoisesLonesome GeorgeGalápagos tortoisesDistinct genetic unitsMitochondrial DNA sequencesMainland South AmericaSouth AmericaEvolutionary relationshipsPhylogenetic reconstructionSeparate colonizationsSouthern subspeciesPinta IslandChaco tortoisesDNA sequencesGalápagos IslandsClosest livingG. chilensisGenetic unitsSubspeciesCharles DarwinTortoisesLarge islandsSan CristobalChilensisLast survivorCytochrome b sequence divergence in the European sea bass (Dicentrarchus labrax) and phylogenetic relationships among some Perciformes species
Allegrucci G, Caccone A, Sbordoni V. Cytochrome b sequence divergence in the European sea bass (Dicentrarchus labrax) and phylogenetic relationships among some Perciformes species. Journal Of Zoological Systematics & Evolutionary Research 1999, 37: 149-156. DOI: 10.1111/j.1439-0469.1999.00115.x.Peer-Reviewed Original ResearchEuropean sea bassEvolutionary relationshipsB geneCytochrome b sequence divergenceMitochondrial DNA D-loop variationEntire cytochrome b geneCyt b sequencesSpecies of PerciformesCyt b geneCytochrome b geneSea bassD-loop variationsPerciformes fishNorthwestern populationsSequence divergencePhylogenetic relationshipsD. punctatusPerciformes speciesB sequencesD. labraxPolymorphic DNADicentrarchus labraxLack of resolutionMediterranean populationsFamily level
1994
Molecular phylogeny of the Anopheles gambiae complex suggests genetic introgression between principal malaria vectors.
Besansky N, Powell J, Caccone A, Hamm D, Scott J, Collins F. Molecular phylogeny of the Anopheles gambiae complex suggests genetic introgression between principal malaria vectors. Proceedings Of The National Academy Of Sciences Of The United States Of America 1994, 91: 6885-6888. PMID: 8041714, PMCID: PMC44302, DOI: 10.1073/pnas.91.15.6885.Peer-Reviewed Original ResearchConceptsAnopheles gambiae complexGambiae complexDNA sequence dataGenetic introgressionGene flowMolecular phylogenyEvolutionary relationshipsSister taxaChromosomal inversionsPhylogenetic treePrincipal malaria vectorAfrotropical speciesSequence dataA. gambiaeNonvector speciesDistant branchesSpeciesMalaria vectorsAnopheles arabiensisEfficient vectorPrincipal vectorIntrogressionPhylogenyMalaria control strategiesTaxa