1998
Tools for Immunization Guideline Knowledge Maintenance II. Automated Web-Based Generation of User-Customized Test Cases
Miller P, Frawley S, Brandt C, Sayward F. Tools for Immunization Guideline Knowledge Maintenance II. Automated Web-Based Generation of User-Customized Test Cases. Journal Of Biomedical Informatics 1998, 31: 190-208. PMID: 9628750, DOI: 10.1006/cbmr.1998.1471.Peer-Reviewed Original ResearchMeSH KeywordsAdolescentChildChild, PreschoolComputer Communication NetworksForecastingHepatitis B VaccinesHumansImmunizationImmunization ScheduleInfantLogicPractice Guidelines as TopicSoftwareSoftware Design
1997
Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web
Panzer S, Cooley L, Miller P. Using explicitly represented biological relationships for database navigation and searching via the World-Wide Web. Bioinformatics 1997, 13: 281-290. PMID: 9183533, DOI: 10.1093/bioinformatics/13.3.281.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsBiologyComputer Communication NetworksCytoskeletal ProteinsCytoskeletonDatabases, FactualGenesUser-Computer InterfaceConceptsWorld Wide WebCGI scriptsDatabase navigationDatabase schemaBiological databasesRetrieval capabilitiesHypertext linksPrototype databaseRelated entitiesDatabase entriesDifferent entitiesPublic useWebWealth of informationDatabaseHyperlinksInformationNavigationBiological relationshipsEntitiesSchemaRequestsScriptsCapabilityNew typeEvaluating IAIMS at Yale
Grajek S, Calarco P, Frawley S, McKay J, Miller P, Paton J, Roderer N, Sullivan J. Evaluating IAIMS at Yale. Journal Of The American Medical Informatics Association 1997, 4: 138-149. PMID: 9067879, PMCID: PMC61503, DOI: 10.1136/jamia.1997.0040138.Peer-Reviewed Original ResearchConceptsNetworked information resourcesInformation resourcesUsage dataMedical Center communityTraditional library resourcesMultiple sourcesInformation accessInformation systemsWorkstation usersUser commentsMultiple resourcesEvaluation resultsLibrary resourcesCenter communityTrue integrationMedical librariesRemote locationsSame informationUse of resourcesResourcesIndividual resourcesInformationIAIMSUsersLibraryA prototype Web site for immunization knowledge maintenance.
Miller P, Frawley S, Brandt C, Sayward F. A prototype Web site for immunization knowledge maintenance. AMIA Annual Symposium Proceedings 1997, 293-7. PMID: 9357635, PMCID: PMC2233449.Peer-Reviewed Original ResearchMeSH KeywordsChildComputer Communication NetworksHumansImmunization ScheduleInformation ServicesPractice Guidelines as TopicTherapy, Computer-AssistedConceptsPrototype Web siteDomain knowledgeWeb sitesComputer-based clinical guidelineWorld Wide WebIMM/ServeRule-based formTest casesIMM/Web projectsKnowledge maintenanceNew versionChild's immunization historyWebForecasting programForecasting parametersCustomizingOrganized fashionLogicVersionForecastingKnowledgeProject
1996
ModelDB: An Environment for Running and Storing Computational Models and Their Results Applied to Neuroscience
Peterson B, Healy M, Nadkarni P, Miller P, Shepherd G. ModelDB: An Environment for Running and Storing Computational Models and Their Results Applied to Neuroscience. Journal Of The American Medical Informatics Association 1996, 3: 389-398. PMID: 8930855, PMCID: PMC116323, DOI: 10.1136/jamia.1996.97084512.Peer-Reviewed Original ResearchMeSH KeywordsBrainComputer Communication NetworksComputer SimulationDatabases, FactualHumansInterinstitutional RelationsModels, BiologicalNeurosciencesPilot ProjectsResearchSystems IntegrationUser-Computer InterfaceConceptsWorld Wide Web interfaceCluster of databasesHuman Brain ProjectWeb interfaceComputational modelIndividual databasesSmall databaseDatabase developmentBrain ProjectComplex informationRelated databasesFormal mannerVast quantitiesSystem functionDiverse sourcesDatabaseInformationWebProjectResearch groupsInitial approachPilot projectIssuesGeneral issuesTechnologyPhenoDB: An Integrated Client/Server Database for Linkage and Population Genetics
Cheung K, Nadkarni P, Silverstein S, Kidd J, Pakstis A, Miller P, Kidd K. PhenoDB: An Integrated Client/Server Database for Linkage and Population Genetics. Journal Of Biomedical Informatics 1996, 29: 327-337. PMID: 8812078, DOI: 10.1006/cbmr.1996.0024.Peer-Reviewed Original ResearchMeSH KeywordsAllelesComputer Communication NetworksComputer GraphicsComputer SystemsData Interpretation, StatisticalDatabase Management SystemsGene FrequencyGenetic LinkageGenetic MarkersGenetics, PopulationHumansInformation Storage and RetrievalInformation SystemsPedigreePhenotypeUser-Computer InterfaceConceptsClient/server databaseClient/server architectureData management tasksData analysis tasksUse graphical interfaceServer architectureDatabase applicationsComplex adServer databaseInteractive validationAnalysis tasksGraphical interfaceFile formatManagement tasksLarge datasetsPhenoDBMultipoint linkageGeneric formatHardy-Weinberg ratiosData entryEfficient managementProject managementGenetic marker dataPopulation geneticsTask
1995
Internet-based Support for Bioscience Research: A Collaborative Genome center for Human Chromosome 12
Miller P, Nadkarni P, Kidd K, Cheung K, Ward D, Banks A, Bray-Ward P, Cupelli L, Herdman V, Marondel I, Montcomery K, Renault B, Yoon S, Krauter K, Kucherlapati R. Internet-based Support for Bioscience Research: A Collaborative Genome center for Human Chromosome 12. Journal Of The American Medical Informatics Association 1995, 2: 351-364. PMID: 8581551, PMCID: PMC116278, DOI: 10.1136/jamia.1995.96157828.Peer-Reviewed Original ResearchMeSH KeywordsChromosome MappingChromosomes, Artificial, YeastChromosomes, Human, Pair 12Computer Communication NetworksConnecticutData DisplayDatabases, FactualGenetic MarkersGenome, HumanHumansInterinstitutional RelationsLocal Area NetworksModels, GeneticNew York CityOrganizational ObjectivesSoftware DesignSystems IntegrationUser-Computer InterfaceConceptsUser-friendly front endInternet-based supportExternal databasesMedical informaticsGenome CenterGenome informaticsDatabase programMapping communityCandidate mapsInformaticsAssembly toolsAreas of bioscienceFront endDatabaseServerSybaseSuch supportCase studySetToolBioscience researchCertain issuesClientsTechnologySupportLessons Learned from a Pilot Implementation of the UMLS Information Sources Map
Miller P, Frawley S, Wright L, Roderer N, Powsner S. Lessons Learned from a Pilot Implementation of the UMLS Information Sources Map. Journal Of The American Medical Informatics Association 1995, 2: 102-115. PMID: 7743314, PMCID: PMC116244, DOI: 10.1136/jamia.1995.95261904.Peer-Reviewed Original ResearchMeSH KeywordsAbstracting and IndexingArtificial IntelligenceComputer Communication NetworksMEDLINEOnline SystemsPilot ProjectsSoftware DesignUnified Medical Language SystemConceptsWide Area Information ServersKnowledge baseUnified Medical Language System (UMLS) projectClient-server softwareInformation Sources MapNavigational toolsBiomedical questionsCross-platform accessClient-server modeSoftware design issuesInformation sourcesElectronic information resourcesInformation serverHeterogeneous sourcesInformation resourcesAutomatic connectionComplexity of developmentMedical usersSystem projectUsersDesign issuesPilot implementationPilot systemSignificant complexityDifferent versionsNetwork-based informatics support of research collaborations in the Human Genome Project and the Human Brain Project.
Miller P, Nadkarni P, Kucherlapati R, Krauter K, Kidd K, Ward D, Shepherd G, Berkowicz D. Network-based informatics support of research collaborations in the Human Genome Project and the Human Brain Project. Medinfo. 1995, 8 Pt 2: 1541-4. PMID: 8591495.Peer-Reviewed Original ResearchMeSH KeywordsBrain MappingChromosome MappingComputer Communication NetworksComputer SimulationCooperative BehaviorHuman Genome ProjectHumansInformation SystemsNeurosciencesSystems IntegrationConceptsInformatics support
1993
Using a network menu and the UMLS Information Sources Map to facilitate access to online reference materials.
Clyman J, Powsner S, Paton J, Miller P. Using a network menu and the UMLS Information Sources Map to facilitate access to online reference materials. Journal Of The Medical Library Association 1993, 81: 207-16. PMID: 8472006, PMCID: PMC225763.Peer-Reviewed Original ResearchMeSH KeywordsComputer Communication NetworksHumansMEDLINEOnline SystemsSoftwareUnified Medical Language SystemUser-Computer InterfaceConceptsInformation Sources MapUnified Medical Language System (UMLS) projectMedicine's Unified Medical Language System (UMLS) projectInformation systemsHigh-speed computer networksBibliographic retrieval systemOnline information systemOnline information sourcesOnline reference materialRetrieval systemNetwork workstationsComputer networksLocal prototypeComputer technologyInformation servicesSystem projectSource mapsUsersInformation sourcesComputer workstationWorkstationsBiomedical researchersOrder entryNetworkNational LibraryAn information sources map for Occupational and Environmental Medicine: guidance to network-based information through domain-specific indexing.
Silverstein S, Miller P, Cullen M. An information sources map for Occupational and Environmental Medicine: guidance to network-based information through domain-specific indexing. AMIA Annual Symposium Proceedings 1993, 616-20. PMID: 8130548, PMCID: PMC2850650.Peer-Reviewed Original Research
1992
Prototyping an institutional IAIMS/UMLS information environment for an academic medical center.
Miller P, Paton J, Clyman J, Powsner S. Prototyping an institutional IAIMS/UMLS information environment for an academic medical center. Journal Of The Medical Library Association 1992, 80: 281-7. PMID: 1326371, PMCID: PMC225668.Peer-Reviewed Original ResearchConceptsIntegrated Academic Information Management SystemUnified Medical Language SystemInformation resourcesAcademic Information Management SystemInformation management systemInformation environmentNetwork-based implementationComputer networksInformation architectureMacintosh computerManagement systemInformation capabilitiesInformation sourcesLanguage systemIntegrated fashionPrototypeDiverse setNational LibraryResourcesCapabilityUsersComputerArchitectureEnvironmentNetworkMolecular dynamics simulation on a network of workstations using a machine-independent parallel programming language
Shifman M, Windemuth A, Schulten K, Miller P. Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language. Journal Of Biomedical Informatics 1992, 25: 168-180. PMID: 1582193, DOI: 10.1016/0010-4809(92)90019-7.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsChemical PhenomenaChemistry, PhysicalComputer Communication NetworksComputer SimulationModels, MolecularSoftwareConceptsMachine-independent parallel programming languageParallel programming languageProgramming languageShared memory parallel computerHigh performance Unix workstationsNetwork of workstationsParallel computing approachMemory parallel computersComputing approachNetworked workstationsUNIX workstationsParallel computersExpensive phaseEffective algorithmResearch communityPerformance benchmarksWorkstationsAlgorithmNetworkGlobal motionLanguageComputerLindaSimulationsBenchmarksHarnessing networked workstations as a powerful parallel computer: a general paradigm illustrated using three programs for genetic linkage analysis
Miller P, Nadkarni P, Bercovitz P. Harnessing networked workstations as a powerful parallel computer: a general paradigm illustrated using three programs for genetic linkage analysis. Bioinformatics 1992, 8: 141-147. PMID: 1591609, DOI: 10.1093/bioinformatics/8.2.141.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsComputer Communication NetworksEvaluation Studies as TopicGenetic LinkageProgramming LanguagesSoftwareConceptsParallel computersMachine-independent parallel programming languageParallel programming languagePowerful parallel computersParallel programsProgramming languageNetworked workstationsComputational resourcesParallel machinesGeneral paradigmBiological computationWorkstationsComputerLindaNetworkInstitutions networkMathematical techniquesParadigmHardwareMachineComputationLanguageCapabilityResources
1991
Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language.
Shifman M, Windemuth A, Schulten K, Miller P. Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language. AMIA Annual Symposium Proceedings 1991, 414-8. PMID: 1807634, PMCID: PMC2247565.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsComputer Communication NetworksComputer SimulationMicrocomputersMolecular ConformationProgramming LanguagesProtein ConformationSoftwareThermodynamicsConceptsMachine-independent parallel programming languageParallel programming languageProgramming languageShared memory parallel computerHigh performance Unix workstationsNetwork of workstationsParallel computing approachMemory parallel computersComputing approachNetworked workstationsUNIX workstationsParallel computersExpensive phaseEffective algorithmResearch communityPerformance benchmarksWorkstationsAlgorithmNetworkGlobal motionLanguageComputerLindaSimulationsBenchmarks