2019
Genetic history of the population of Crete
Drineas P, Tsetsos F, Plantinga A, Lazaridis I, Yannaki E, Razou A, Kanaki K, Michalodimitrakis M, Perez‐Jimenez F, De Silvestro G, Renda MC, Stamatoyannopoulos JA, Kidd KK, Browning BL, Paschou P, Stamatoyannopoulos G. Genetic history of the population of Crete. Annals Of Human Genetics 2019, 83: 373-388. PMID: 31192450, PMCID: PMC6851683, DOI: 10.1111/ahg.12328.Peer-Reviewed Original ResearchConceptsHistorical recordsCretan populationMedieval historyMedieval periodArab occupationMultiple warsSmall genetic contributionContemporary recordsMiddle AgesGenetic historyIsland of CreteEastern EuropeansPopulation of CreteHistoriansCreteVenetiansOccupationCretanBiased interpretationLocal populationHistoryGenetic perspectiveRecordsIslandsConquerors
2012
Genome-wide association study of Tourette's syndrome
Scharf JM, Yu D, Mathews CA, Neale BM, Stewart SE, Fagerness JA, Evans P, Gamazon E, Edlund CK, Service SK, Tikhomirov A, Osiecki L, Illmann C, Pluzhnikov A, Konkashbaev A, Davis LK, Han B, Crane J, Moorjani P, Crenshaw AT, Parkin MA, Reus VI, Lowe TL, Rangel-Lugo M, Chouinard S, Dion Y, Girard S, Cath DC, Smit JH, King RA, Fernandez TV, Leckman JF, Kidd KK, Kidd JR, Pakstis AJ, State MW, Herrera LD, Romero R, Fournier E, Sandor P, Barr CL, Phan N, Gross-Tsur V, Benarroch F, Pollak Y, Budman CL, Bruun RD, Erenberg G, Naarden AL, Lee PC, Weiss N, Kremeyer B, Berrío GB, Campbell DD, Cardona Silgado JC, Ochoa WC, Mesa Restrepo SC, Muller H, Valencia Duarte AV, Lyon GJ, Leppert M, Morgan J, Weiss R, Grados MA, Anderson K, Davarya S, Singer H, Walkup J, Jankovic J, Tischfield JA, Heiman GA, Gilbert DL, Hoekstra PJ, Robertson MM, Kurlan R, Liu C, Gibbs JR, Singleton A, Hardy J, Strengman E, Ophoff R, Wagner M, Moessner R, Mirel D, Posthuma D, Sabatti C, Eskin E, Conti D, Knowles J, Ruiz-Linares A, Rouleau G, Purcell S, Heutink P, Oostra B, McMahon W, Freimer N, Cox N, Pauls D. Genome-wide association study of Tourette's syndrome. Molecular Psychiatry 2012, 18: 721-728. PMID: 22889924, PMCID: PMC3605224, DOI: 10.1038/mp.2012.69.Peer-Reviewed Original ResearchMeSH KeywordsAdolescentAdultAttention Deficit Disorder with HyperactivityCase-Control StudiesChromosomes, Human, Pair 9FemaleFibrillar CollagensGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansInternational CooperationMaleMeta-Analysis as TopicObsessive-Compulsive DisorderPolymorphism, Single NucleotideTourette SyndromeWhite PeopleYoung AdultConceptsGenome-wide association studiesFirst genome-wide association studyAssociation studiesTop signalsFull genetic architectureAncestry-matched controlsEuropean ancestry samplesGenetic architectureGWAS dataComplex inheritanceEuropean-derived populationsSusceptibility variantsSusceptibility genesEventual identificationEuropean ancestryCosta RicaChromosome 9q32Familial recurrence rateNorth AmericaComplete understandingAmerican populationCentral ValleyNeuropsychiatric diseasesDevelopmental disordersGenes
2011
Single nucleotide polymorphisms and haplotypes in Native American populations
Kidd JR, Friedlaender F, Pakstis AJ, Furtado M, Fang R, Wang X, Nievergelt CM, Kidd KK. Single nucleotide polymorphisms and haplotypes in Native American populations. American Journal Of Biological Anthropology 2011, 146: 495-502. PMID: 21913176, PMCID: PMC3658315, DOI: 10.1002/ajpa.21560.Peer-Reviewed Original ResearchConceptsSingle nucleotide polymorphismsNative American populationsAutosomal markersModern Native American populationsNucleotide polymorphismsOld World populationsEvolutionary relationshipsAmerican populationDifferent small setsDNA polymorphismsEurasian originAncestry inferenceMultiple populationsPolymorphismLarge comprehensive datasetAscertainment biasesNew WorldSmall independent setsMarkersComprehensive datasetClose relationshipPopulationHaplotypesNew informationSelection on the Human Bitter Taste Gene, TAS2R16, in Eurasian Populations
Li H, Pakstis AJ, Kidd JR, Kidd KK. Selection on the Human Bitter Taste Gene, TAS2R16, in Eurasian Populations. Human Biology 2011, 83: 363-377. PMID: 21740153, DOI: 10.3378/027.083.0303.Peer-Reviewed Original ResearchRare BRCA1 haplotypes including 3’UTR SNPs associated with breast cancer risk
Pelletier C, Speed WC, Paranjape T, Keane K, Blitzblau R, Hollestelle A, Safavi K, van den Ouweland A, Zelterman D, Slack FJ, Kidd KK, Weidhaas JB. Rare BRCA1 haplotypes including 3’UTR SNPs associated with breast cancer risk. Cell Cycle 2011, 10: 90-99. PMID: 21191178, PMCID: PMC3048078, DOI: 10.4161/cc.10.1.14359.Peer-Reviewed Original ResearchConceptsGenetic markersRare haplotypesNew genetic markersBRCA1 3'UTRSequence mutationsMicroRNA bindingFunctional variantsSuch polymorphismsHaplotypesMutationsBRCA1Haplotype analysisPolymorphismSNPsRegion polymorphismsVariantsFunctional polymorphismsBreast cancer subtypesCancer subtypesMarkersBRCA1 haplotypeMiRNALarge populationBRCA1 mutationsBinding
2009
Genetic Landscape of Eurasia and “Admixture” in Uyghurs
Li H, Cho K, Kidd JR, Kidd KK. Genetic Landscape of Eurasia and “Admixture” in Uyghurs. American Journal Of Human Genetics 2009, 85: 934-937. PMID: 20004770, PMCID: PMC2790568, DOI: 10.1016/j.ajhg.2009.10.024.Peer-Reviewed Original Research
2004
Indications of Linkage and Association of Gilles de la Tourette Syndrome in Two Independent Family Samples: 17q25 Is a Putative Susceptibility Region
Paschou P, Feng Y, Pakstis A, Speed W, DeMille M, Kidd J, Jaghori B, Kurlan R, Pauls D, Sandor P, Barr C, Kidd K. Indications of Linkage and Association of Gilles de la Tourette Syndrome in Two Independent Family Samples: 17q25 Is a Putative Susceptibility Region. American Journal Of Human Genetics 2004, 75: 545-560. PMID: 15303240, PMCID: PMC1182043, DOI: 10.1086/424389.Peer-Reviewed Original ResearchMeSH KeywordsC-Reactive ProteinChromosome MappingChromosomes, Human, Pair 17Gene FrequencyGenetic LinkageGenetic Predisposition to DiseaseGenotypeHaplotypesHumansLinkage DisequilibriumLod ScoreMicrosatellite RepeatsMicrotubule-Associated ProteinsNerve Tissue ProteinsPedigreePolymorphism, Single NucleotideTourette SyndromeWhite PeopleConceptsSingle nucleotide polymorphismsLinkage disequilibriumSusceptibility regionsThree-site haplotypesPutative susceptibility regionsBackground linkage disequilibriumSignificant association resultsIndication of linkageNonparametric LOD scoreGenomic regionsThree-marker haplotypeComplex genetic backgroundAdditional microsatellite markersFine mappingGenetic basisHigher LD valuesMicrosatellite markersExpression profilesAssociation resultsTransmission/disequilibrium testChromosome 17Genetic componentGenetic backgroundGenesLOD score
1999
Y‐chromosome specific YCAII, DYS19 and YAP polymorphisms in human populations: a comparative study
QUINTANA‐MURCI L, SEMINO O, POLONI E, LIU A, VAN GIJN M, PASSARINO G, BREGA A, NASIDZE I, MACCIONI L, COSSU G, AL‐ZAHERY N, KIDD J, KIDD K, SANTACHIARA‐BENERECETTI A. Y‐chromosome specific YCAII, DYS19 and YAP polymorphisms in human populations: a comparative study. Annals Of Human Genetics 1999, 63: 153-166. PMID: 10738527, DOI: 10.1046/j.1469-1809.1999.6320153.x.Peer-Reviewed Original ResearchConceptsY Alu PolymorphismGenetic structureGenetic affinityStrong genetic structurePopulation genetic structureAlu polymorphismsY markersHuman populationYCAIIDifferent populationsRelated groupsPolymorphismSpecific markersPopulationMarkersDYS19Geographic locationDifferent statistical analysesFrequency distributionSTRAffinityA more powerful method to evaluate p‐values in GENEHUNTER
Zhao H, Sheffield L, Pakstis A, Knauert M, Kidd K. A more powerful method to evaluate p‐values in GENEHUNTER. Genetic Epidemiology 1999, 17: s415-s420. PMID: 10597472, DOI: 10.1002/gepi.1370170770.Peer-Reviewed Original Research
1995
Evidence for inter-generational instability in the CAG repeat in the MJD1 gene and for conserved haplotypes at flanking markers amongst Japanese and Caucasian subjects with Machado-Joseph disease
Takiyama Y, Igasrashi S, Rogaeva E, Endo K, Rogaev E, Tanaka H, Sherrington R, Sanpei K, Liang Y, Saito M, Tsuda T, Takano H, Ikeda M, Lin C, Chi H, Kennedy J, Lang A, Wherrett J, Segawa M, Nomura Y, Yuasa T, Weissenbach J, Yoshida M, Nishizawa M, Kidd K, Tsuji S, St George-Hyslop P. Evidence for inter-generational instability in the CAG repeat in the MJD1 gene and for conserved haplotypes at flanking markers amongst Japanese and Caucasian subjects with Machado-Joseph disease. Human Molecular Genetics 1995, 4: 1137-1146. PMID: 8528200, DOI: 10.1093/hmg/4.7.1137.Peer-Reviewed Original ResearchAge of OnsetAllelesAsian PeopleAtaxin-3Base SequenceConserved SequenceFemaleGenetics, PopulationHaplotypesHomozygoteHumansJapanMachado-Joseph DiseaseMaleMeiosisMolecular Sequence DataNerve Tissue ProteinsNuclear ProteinsPedigreePhenotypePolymorphism, GeneticProteinsRepetitive Sequences, Nucleic AcidRepressor ProteinsWhite People
1992
Human population genetic studies using hypervariable loci. I. Analysis of Assamese, Australian, Cambodian, Caucasian, Chinese and Melanesian populations.
Balazs I, Neuweiler J, Gunn P, Kidd J, Kidd K, Kuhl J, Mingjun L. Human population genetic studies using hypervariable loci. I. Analysis of Assamese, Australian, Cambodian, Caucasian, Chinese and Melanesian populations. Genetics 1992, 131: 191-198. PMID: 1350557, PMCID: PMC1204953, DOI: 10.1093/genetics/131.1.191.Peer-Reviewed Original ResearchTwo RFLPs near HOX2@INGFR at locus D17S444E
Kennedy J, Honer W, Kaufmann C, Martignetti J, Brosius J, Kidd K. Two RFLPs near HOX2@INGFR at locus D17S444E. Nucleic Acids Research 1992, 20: 1171-1171. PMID: 1372406, PMCID: PMC312148, DOI: 10.1093/nar/20.5.1171.Peer-Reviewed Original ResearchA dinucleotide repeat polymorphism at the HOX2B locus
Deinard A, Ruano G, Kidd K. A dinucleotide repeat polymorphism at the HOX2B locus. Nucleic Acids Research 1992, 20: 1171-1171. PMID: 1347934, PMCID: PMC312149, DOI: 10.1093/nar/20.5.1171-a.Peer-Reviewed Original Research
1991
The Utility of DNA Typing in Forensic Work
Chakraborty R, Kidd K. The Utility of DNA Typing in Forensic Work. Science 1991, 254: 1735-1739. PMID: 1763323, DOI: 10.1126/science.1763323.Peer-Reviewed Original ResearchStudy of an additional 58 DNA markers in five human populations from four continents.
Bowcock A, Hebert J, Mountain J, Kidd J, Rogers J, Kidd K, Cavalli-Sforza L. Study of an additional 58 DNA markers in five human populations from four continents. Gene Geography 1991, 5: 151-73. PMID: 1841601.Peer-Reviewed Original Research
1990
Haplotype of multiple polymorphisms resolved by enzymatic amplification of single DNA molecules.
Ruano G, Kidd K, Stephens J. Haplotype of multiple polymorphisms resolved by enzymatic amplification of single DNA molecules. Proceedings Of The National Academy Of Sciences Of The United States Of America 1990, 87: 6296-6300. PMID: 1974719, PMCID: PMC54520, DOI: 10.1073/pnas.87.16.6296.Peer-Reviewed Original ResearchBase SequenceDeoxyribonucleases, Type II Site-SpecificDNAGenetic Carrier ScreeningGenetic LinkageHaplotypesHumansMolecular Sequence DataNucleic Acid Amplification TechniquesOligonucleotide ProbesPolymerase Chain ReactionPolymorphism, GeneticPolymorphism, Restriction Fragment LengthTourette SyndromeWhite PeopleStrong linkage disequilibrium between the XY274 polymorphism and the pseudoautosomal boundary.
Ellis N, Kidd J, Goodfellow P, Kidd K, Goodfellow P. Strong linkage disequilibrium between the XY274 polymorphism and the pseudoautosomal boundary. American Journal Of Human Genetics 1990, 46: 950-5. PMID: 2339693, PMCID: PMC1683589.Peer-Reviewed Original Research
1987
Study of 47 DNA markers in five populations from four continents.
Bowcock A, Bucci C, Hebert J, Kidd J, Kidd K, Friedlaender J, Cavalli-Sforza L. Study of 47 DNA markers in five populations from four continents. Gene Geography 1987, 1: 47-64. PMID: 2908691.Peer-Reviewed Original Research
1973
SHOCKLEY
Kidd K. SHOCKLEY. The Lancet 1973, 301: 772. PMID: 4120749, DOI: 10.1016/s0140-6736(73)92161-2.Peer-Reviewed Original Research