2020
Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156
Hehnly C, Zhang L, Paulson J, Almeida M, von Bredow B, Wijetunge D, Galperin M, Sheldon K, Schiff S, Broach J. Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156. Microbiology Resource Announcements 2020, 9: 10.1128/mra.00181-20. PMID: 32273361, PMCID: PMC7380522, DOI: 10.1128/mra.00181-20.Peer-Reviewed Original Research
2018
Draft Genome Sequence of an Erwinia tracheiphila Isolate from an Infected Muskmelon (Cucumis melo)
Shapiro L, Andrade A, Scully E, Rocha J, Paulson J, Kolter R. Draft Genome Sequence of an Erwinia tracheiphila Isolate from an Infected Muskmelon (Cucumis melo). Microbiology Resource Announcements 2018, 7: 10.1128/mra.01058-18. PMID: 30533754, PMCID: PMC6256489, DOI: 10.1128/mra.01058-18.Peer-Reviewed Original ResearchInfected muskmelonDraft genome sequenceBacterial plant pathogensCucumis meloChromosome contigPlasmid contigsEastern North AmericaGenome sequencePlant pathogensE. tracheiphilaGenetic variationErwinia tracheiphilaContigsGenomeCucumisNorth AmericaMuskmelonBacteriophageErwiniaPlasmidPathogensSequenceIsolates
2017
Minimal genetic change in Vibrio cholerae in Mozambique over time: Multilocus variable number tandem repeat analysis and whole genome sequencing
Garrine M, Mandomando I, Vubil D, Nhampossa T, Acacio S, Li S, Paulson J, Almeida M, Domman D, Thomson N, Alonso P, Stine O. Minimal genetic change in Vibrio cholerae in Mozambique over time: Multilocus variable number tandem repeat analysis and whole genome sequencing. PLOS Neglected Tropical Diseases 2017, 11: e0005671. PMID: 28622368, PMCID: PMC5489214, DOI: 10.1371/journal.pntd.0005671.Peer-Reviewed Original ResearchConceptsMultilocus variable-number tandem-repeat analysisWhole-genome sequencingTandem repeat analysisGenome sequenceMultilocus variable number tandem repeat analysisVariable number tandem repeat analysisVariable-number tandem repeat analysisCholera toxin geneVibrio cholerae isolatesPresence of recombinationMinimal genetic changeMLVA lociCholerae isolatesSeventh pandemicGenetic relatednessClonal complexesToxin genesMolecular clockVibrio choleraeClinical isolatesIdentical isolatesGenetic changesRepeat analysisEnvironmental reservoirsIsolates