Featured Publications
A clonal expression biomarker associates with lung cancer mortality
Biswas D, Birkbak N, Rosenthal R, Hiley C, Lim E, Papp K, Boeing S, Krzystanek M, Djureinovic D, La Fleur L, Greco M, Döme B, Fillinger J, Brunnström H, Wu Y, Moore D, Skrzypski M, Abbosh C, Litchfield K, Al Bakir M, Watkins T, Veeriah S, Wilson G, Jamal-Hanjani M, Moldvay J, Botling J, Chinnaiyan A, Micke P, Hackshaw A, Bartek J, Csabai I, Szallasi Z, Herrero J, McGranahan N, Swanton C. A clonal expression biomarker associates with lung cancer mortality. Nature Medicine 2019, 25: 1540-1548. PMID: 31591602, PMCID: PMC6984959, DOI: 10.1038/s41591-019-0595-z.Peer-Reviewed Original ResearchConceptsNon-small cell lung cancerClinicopathological risk factorsCell lung cancerLung cancer mortalityPrognostic gene expression signaturesCancer cell proliferationGene expression signaturesCancer mortalityLung cancerRisk factorsExpression-based biomarkersCopy number gainsDisease subtypesClinical descriptorsTranscriptomic biomarkersIndividual tumorsCancer typesDiagnostic precisionMolecular biomarkersExpression signaturesCell proliferationDNA copy number gainsBiomarkersPatientsIntratumor heterogeneity
2024
Artificial intelligence methods for improved detection of undiagnosed heart failure with preserved ejection fraction
Wu J, Biswas D, Ryan M, Bernstein B, Rizvi M, Fairhurst N, Kaye G, Baral R, Searle T, Melikian N, Sado D, Lüscher T, Grocott‐Mason R, Carr‐White G, Teo J, Dobson R, Bromage D, McDonagh T, Shah A, O'Gallagher K. Artificial intelligence methods for improved detection of undiagnosed heart failure with preserved ejection fraction. European Journal Of Heart Failure 2024, 26: 302-310. PMID: 38152863, DOI: 10.1002/ejhf.3115.Peer-Reviewed Original ResearchConceptsLeft ventricular ejection fractionDiagnosis of HFpEFEuropean Society of CardiologyHeart failureNatural language processingElectronic health recordsEuropean Society of Cardiology criteriaClinical diagnosis of HFEuropean Society of Cardiology diagnostic criteriaDiagnostic criteriaVentricular ejection fractionRetrospective cohort studyDiagnosis of HFSociety of CardiologyClinician-assigned diagnosisConsecutive patientsHFpEF patientsEjection fractionElectronic health record dataAcute cardiovascular eventsExpert clinical reviewNatural language processing methodsNatural language processing pipelineHFpEFCardiovascular events