A molecular phylogeny for the Drosophila melanogaster subgroup and the problem of polymorphism data.
Caccone A, Moriyama E, Gleason J, Nigro L, Powell J. A molecular phylogeny for the Drosophila melanogaster subgroup and the problem of polymorphism data. Molecular Biology And Evolution 1996, 13: 1224-1232. PMID: 8896375, DOI: 10.1093/oxfordjournals.molbev.a025688.Peer-Reviewed Original ResearchConceptsDNA-DNA hybridization dataDNA sequence dataSequence dataD. sechelliaMelanogaster subgroupD. mauritianaHybridization dataNuclear DNA sequence dataPrevious DNA-DNA hybridization dataNew DNA sequence dataSerendipity alpha geneDrosophila melanogaster subgroupITS of rDNAD. simulansIsland speciesMolecular phylogenyDrosophila melanogasterPhylogenetic relationshipsSister statusIntraspecific polymorphismPhylogenetic standpointRelated speciesPhylogenetic inferenceMost speciesParallel evolutionIntraspecific nuclear DNA variation in Drosophila.
Moriyama E, Powell J. Intraspecific nuclear DNA variation in Drosophila. Molecular Biology And Evolution 1996, 13: 261-277. PMID: 8583899, DOI: 10.1093/oxfordjournals.molbev.a025563.Peer-Reviewed Original ResearchConceptsD. melanogasterDNA polymorphismsD. simulansD. pseudoobscuraNeutral theorySpecies of DrosophilaNuclear DNA variationMcDonald-Kreitman testNon-coding DNALevel of polymorphismFourfold degenerate sitesCodon usage biasLevel of variationReplacement polymorphismsNucleotide heterozygosityNoncoding DNAHKA testTajima's testReplacement substitutionsDNA variationSilent sitesGenetic codeAutosomal genesPopulation historyUsage bias