2021
A fast likelihood approach for estimation of large phylogenies from continuous trait data
Peng J, Rajeevan H, Kubatko L, RoyChoudhury A. A fast likelihood approach for estimation of large phylogenies from continuous trait data. Molecular Phylogenetics And Evolution 2021, 161: 107142. PMID: 33713799, DOI: 10.1016/j.ympev.2021.107142.Peer-Reviewed Original ResearchMeSH KeywordsBayes TheoremGene FrequencyHumansLikelihood FunctionsPhenotypePhylogenyReproducibility of ResultsResearch DesignConceptsContinuous trait dataMaximum likelihood estimatorMaximum likelihood estimatesMathematical propertiesHundreds of taxaInternal branch lengthsFast approximationAddition of taxaLarge-scale genomic dataCollection of methodsBayesian frameworkLikelihood estimatorLikelihood estimatesLikelihood approachMaximum likelihoodIntensive calculationsModel-based methodApproximationLarge phylogeniesComparable accuracyPossible phylogenyInferenceBranch lengthsEstimatorSuch data
2020
FrogAncestryCalc: A standalone batch likelihood computation tool for ancestry inference panels catalogued in FROG-kb
Rajeevan H, Soundararajan U, Pakstis AJ, Kidd KK. FrogAncestryCalc: A standalone batch likelihood computation tool for ancestry inference panels catalogued in FROG-kb. Forensic Science International Genetics 2020, 46: 102237. PMID: 31991337, DOI: 10.1016/j.fsigen.2020.102237.Peer-Reviewed Original Research
2017
The redesigned Forensic Research/Reference on Genetics-knowledge base, FROG-kb
Kidd KK, Soundararajan U, Rajeevan H, Pakstis AJ, Moore KN, Ropero-Miller JD. The redesigned Forensic Research/Reference on Genetics-knowledge base, FROG-kb. Forensic Science International Genetics 2017, 33: 33-37. PMID: 29175726, DOI: 10.1016/j.fsigen.2017.11.009.Peer-Reviewed Original ResearchConceptsWeb interfaceFROG-kbAccessible web interfaceDatabase interfaceEasy navigationNew reference panelsWeb sitesGenetic knowledge baseIndividual identification single nucleotide polymorphismsExtensive redesignExtensive documentationOngoing updatesComprehensive toolInterfaceOngoing researchForensicsNavigationIndividual identification SNPsFunctional enhancementReference population dataPrototypeDocumentation
2016
Evaluating a subset of ancestry informative SNPs for discriminating among Southwest Asian and circum-Mediterranean populations
Bulbul O, Cherni L, Khodjet-el-khil H, Rajeevan H, Kidd KK. Evaluating a subset of ancestry informative SNPs for discriminating among Southwest Asian and circum-Mediterranean populations. Forensic Science International Genetics 2016, 23: 153-158. PMID: 27160361, DOI: 10.1016/j.fsigen.2016.04.010.Peer-Reviewed Original Research
2014
Application of six IrisPlex SNPs and comparison of two eye color prediction systems in diverse Eurasia populations
Yun L, Gu Y, Rajeevan H, Kidd KK. Application of six IrisPlex SNPs and comparison of two eye color prediction systems in diverse Eurasia populations. International Journal Of Legal Medicine 2014, 128: 447-453. PMID: 24395150, DOI: 10.1007/s00414-013-0953-1.Peer-Reviewed Original Research