2024
A supervised Bayesian factor model for the identification of multi-omics signatures
Gygi J, Konstorum A, Pawar S, Aron E, Kleinstein S, Guan L. A supervised Bayesian factor model for the identification of multi-omics signatures. Bioinformatics 2024, 40: btae202. PMID: 38603606, PMCID: PMC11078774, DOI: 10.1093/bioinformatics/btae202.Peer-Reviewed Original ResearchMeSH KeywordsBayes TheoremComputational BiologyCOVID-19FemaleGenomicsHumansMultiomicsSupervised Machine LearningConceptsMulti-omics signaturesBayesian factor modelMulti-omics dataMulti-omics integrationSupplementary dataOmics datasetsMulti-omicsProfiling datasetsR packageDiverse assaysImproved biological understandingProfiling assaysSignature discoveryBioinformaticsProfiling studiesBiological understandingDimensionality reductionBiological responsesBiological signaturesCombination of dimensionality reduction
2017
Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks
Li YH, Li D, Samusik N, Wang X, Guan L, Nolan GP, Wong H. Scalable multi-sample single-cell data analysis by Partition-Assisted Clustering and Multiple Alignments of Networks. PLOS Computational Biology 2017, 13: e1005875. PMID: 29281633, PMCID: PMC5760091, DOI: 10.1371/journal.pcbi.1005875.Peer-Reviewed Original Research