2023
Is Attention Interpretation? A Quantitative Assessment on Sets
Haab J, Deutschmann N, Martínez M. Is Attention Interpretation? A Quantitative Assessment on Sets. Communications In Computer And Information Science 2023, 1752: 303-321. DOI: 10.1007/978-3-031-23618-1_21.Peer-Reviewed Original ResearchBinary classification problemInterpretation of attentionClassification problemAttention mechanismSynthetic datasetsUnordered collectionClassification performanceSilent failuresMachine learningGlobal labelsData modalitiesIndividual instancesAttention distributionAttention scoresAttention patternsData pointsSub-componentsInstancesDataset
2019
Network-based Biased Tree Ensembles (NetBiTE) for Drug Sensitivity Prediction and Drug Sensitivity Biomarker Identification in Cancer
Oskooei A, Manica M, Mathis R, Martínez M. Network-based Biased Tree Ensembles (NetBiTE) for Drug Sensitivity Prediction and Drug Sensitivity Biomarker Identification in Cancer. Scientific Reports 2019, 9: 15918. PMID: 31685861, PMCID: PMC6828742, DOI: 10.1038/s41598-019-52093-w.Peer-Reviewed Original ResearchConceptsMembrane receptor pathwayDrug sensitivity predictionProtein-protein interaction networkDrug sensitivityGenomics of Drug SensitivityDrug targetsGene expression dataIGFR signaling pathwaysAssignment of high weightsBiomarker identificationExpression dataInteraction networkSensitivity predictionSignaling pathwaySignaling pathway inhibitorsReceptor pathwayTree ensemblesPathway inhibitorPathwayGenomeGenesGDSCNeighborhoods of influenceIdentificationSynthetic datasets