2024
Towards Enhanced Topic Discovery on Semantic Maps for Biomedical Literature Exploration
Choi B, Ondov B, He H, Xu H. Towards Enhanced Topic Discovery on Semantic Maps for Biomedical Literature Exploration. 2024, 00: 25-27. DOI: 10.1109/vahc65315.2024.00015.Peer-Reviewed Original ResearchSemantic mapHierarchical topic modelTF-IDF methodCentroid-based methodHierarchical topicsTopic discoveryGrowth of biomedical researchLabel generationTopic treeTopic modelsOverwhelming volumeNovel methodHierarchical clusteringPublic distributionLiterature explorationSemanticsMapsEnhanced visualizationHDBSCANTopicsLabelingMethodRepresentationVisualizationVolume of literature
2006
Natural language processing and visualization in the molecular imaging domain
Tulipano P, Tao Y, Millar W, Zanzonico P, Kolbert K, Xu H, Yu H, Chen L, Lussier Y, Friedman C. Natural language processing and visualization in the molecular imaging domain. Journal Of Biomedical Informatics 2006, 40: 270-281. PMID: 17084109, DOI: 10.1016/j.jbi.2006.08.002.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsCell LineComputational BiologyDatabases, BibliographicDatabases, GeneticDiagnostic ImagingGenomicsHumansInformation Storage and RetrievalNatural Language ProcessingPhenotypeProgramming LanguagesSoftwareSystems IntegrationTerminology as TopicUser-Computer InterfaceVocabulary, ControlledConceptsImaging domainNatural language processing systemsNatural language processingLanguage processing systemJava viewerNLP systemsFormal evaluation studiesLanguage processingInformation resourcesProcessing systemMedical imagingIndex imagesSystem performanceBiological informationInformationImagesVisualizationBioMedLEEPerformanceNLPEvaluation studyDomainGenomics literatureSystemSimultaneous visualization