2024
Prior knowledge-guided vision-transformer-based unsupervised domain adaptation for intubation prediction in lung disease at one week
Yang J, Henao J, Dvornek N, He J, Bower D, Depotter A, Bajercius H, de Mortanges A, You C, Gange C, Ledda R, Silva M, Dela Cruz C, Hautz W, Bonel H, Reyes M, Staib L, Poellinger A, Duncan J. Prior knowledge-guided vision-transformer-based unsupervised domain adaptation for intubation prediction in lung disease at one week. Computerized Medical Imaging And Graphics 2024, 118: 102442. DOI: 10.1016/j.compmedimag.2024.102442.Peer-Reviewed Original ResearchUnsupervised domain adaptationSpatial prior informationDomain adaptationLabeled dataData-driven approachUnsupervised domain adaptation modelMedical image analysis tasksImage analysis tasksTransformer-based modelsMedical image analysisPrior informationOutcome prediction tasksAdversarial trainingDistribution alignmentDomain shiftAttention headsClass tokenPoor generalizationAnalysis tasksTarget domainPrediction taskData distributionKnowledge-guidedLocal weightsMedical images
2004
Neighbor-Constrained Segmentation With Level Set Based 3-D Deformable Models
Yang J, Staib LH, Duncan JS. Neighbor-Constrained Segmentation With Level Set Based 3-D Deformable Models. IEEE Transactions On Medical Imaging 2004, 23: 940-948. PMID: 15338728, PMCID: PMC2838450, DOI: 10.1109/tmi.2004.830802.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsBrainComputer SimulationElasticityHumansImage EnhancementImage Interpretation, Computer-AssistedImaging, Three-DimensionalInformation Storage and RetrievalMagnetic Resonance ImagingModels, BiologicalModels, StatisticalNumerical Analysis, Computer-AssistedPattern Recognition, AutomatedReproducibility of ResultsSensitivity and SpecificitySignal Processing, Computer-AssistedConceptsThree-dimensional medical imagesImage gray level informationGray level informationPoint distribution modelMedical imagesNeighbor objectsTraining imagesMedical imageryMultiple objectsDeformable modelObject shapeSynthetic dataLevel informationSegmentationMap shapeEstimation frameworkPosition relationshipPrior informationLevel set functionObjectsJoint probability distributionSet functionNeighboring shapesInformationImagesSegmentation of 3D Deformable Objects with Level Set Based Prior Models
Yang J, Tagare HD, Staib LH, Duncan JS. Segmentation of 3D Deformable Objects with Level Set Based Prior Models. 2011 IEEE International Symposium On Biomedical Imaging: From Nano To Macro 2004, 1: 85-88. PMID: 20300448, PMCID: PMC2840654, DOI: 10.1109/isbi.2004.1398480.Peer-Reviewed Original ResearchMultiple objectsMedical imagesObject shapeExplicit point correspondencesShape prior constraintVariation of objectsTraining imagesMultidimensional dataTraining phaseDeformable modelDeformable objectsPoint correspondencesSegmentationPrior constraintsPrior informationLevel set functionPrior modelEstimation modelImagesObjectsLevel setsSet functionMaximum ARepresentationPoint distribution
2003
Neighbor-Constrained Segmentation with 3D Deformable Models
Yang J, Staib LH, Duncan JS. Neighbor-Constrained Segmentation with 3D Deformable Models. Lecture Notes In Computer Science 2003, 18: 198-209. PMID: 15344458, DOI: 10.1007/978-3-540-45087-0_17.Peer-Reviewed Original ResearchConceptsImage gray level informationGray level informationNeighbor objectsMedical imagesTraining imagesMedical imageryMultiple objectsDeformable modelSynthetic dataLevel informationSegmentationMap shapeEstimation frameworkPrior informationLevel set functionObjectsJoint probability distributionSet functionInformationImagesNovel methodMaximum AJoint density functionProbability distributionFramework
2002
Prior Shape Models for Boundary Finding
Staib L. Prior Shape Models for Boundary Finding. 2002, 30-33. DOI: 10.1109/isbi.2002.1029185.Peer-Reviewed Original ResearchBoundary findingTraining setAvailable training setPrior shape informationPrior informationPrior shape modelImage informationPrior shapeShape informationTarget objectBayesian formulationShape modelStatistical variationSmoothness constraintShape parametersNatural approachPosterior probabilityGeneric informationInformationObjectsAdditional flexibilitySetKey componentImagesSimilar shape
1992
Boundary finding with parametrically deformable models
Staib L, Duncan J. Boundary finding with parametrically deformable models. IEEE Transactions On Pattern Analysis And Machine Intelligence 1992, 14: 1061-1075. DOI: 10.1109/34.166621.Peer-Reviewed Original ResearchBoundary findingDeformable modelElliptic Fourier decompositionProbabilistic deformable modelGlobal shape informationShape informationSynthetic imagesOptimization problemFlexible constraintsPrior informationImage qualityIrregularity of shapeObjective functionPosteriori objective functionInformationSegmentationParametric modelProbability distributionImagesObjectsModelRepresentationConstraints