2024
Dose-aware Diffusion Model for 3D Low-count Cardiac SPECT Image Denoising with Projection-domain Consistency
Xie H, Gan W, Chen X, Zhou B, Liu Q, Xia M, Guo X, Liu Y, An H, Kamilov U, Wang G, Sinusas A, Liu C. Dose-aware Diffusion Model for 3D Low-count Cardiac SPECT Image Denoising with Projection-domain Consistency. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10655170.Peer-Reviewed Original ResearchImage denoisingImage denoising performanceDeep learning techniquesNoise-levelDenoising performanceDenoising resultsNeural networkLearning techniquesSPECT imagesLow count levelsSPECT scansDenoisingSampling stepIterative reconstructionNoise amplitudeImagesInjected dosePatient studiesDiffusion modelRadiation exposureCardiology studiesSPECTNetworkStochastic natureMLEMDuDoCFNet: Dual-Domain Coarse-to-Fine Progressive Network for Simultaneous Denoising, Limited-View Reconstruction, and Attenuation Correction of Cardiac SPECT
Chen X, Zhou B, Guo X, Xie H, Liu Q, Duncan J, Sinusas A, Liu C. DuDoCFNet: Dual-Domain Coarse-to-Fine Progressive Network for Simultaneous Denoising, Limited-View Reconstruction, and Attenuation Correction of Cardiac SPECT. IEEE Transactions On Medical Imaging 2024, 43: 3110-3125. PMID: 38578853, PMCID: PMC11539864, DOI: 10.1109/tmi.2024.3385650.Peer-Reviewed Original ResearchMulti-task learning methodCross-domainLimited-viewLearning methodsCoarse-to-fine estimationProgressive networkDual domainCross-modal feature fusionDual-domain networkProgressive learning strategyCross-modal informationSimultaneous denoisingFeature fusionSingle-photon emission computed tomographyImage domainCardiac single-photon emission computed tomographyReconstruction accuracyDenoisingHardware expenseFusion mechanismAccelerated scansImage noiseM-mapSuperior accuracyNetworkTAI-GAN: A Temporally and Anatomically Informed Generative Adversarial Network for early-to-late frame conversion in dynamic cardiac PET inter-frame motion correction
Guo X, Shi L, Chen X, Liu Q, Zhou B, Xie H, Liu Y, Palyo R, Miller E, Sinusas A, Staib L, Spottiswoode B, Liu C, Dvornek N. TAI-GAN: A Temporally and Anatomically Informed Generative Adversarial Network for early-to-late frame conversion in dynamic cardiac PET inter-frame motion correction. Medical Image Analysis 2024, 96: 103190. PMID: 38820677, PMCID: PMC11180595, DOI: 10.1016/j.media.2024.103190.Peer-Reviewed Original ResearchGenerative adversarial networkAdversarial networkMotion estimation accuracyInter-frame motionIntensity-based image registration techniqueAll-to-oneSegmentation masksImage registration techniquesOriginal frameTemporal informationDiagnosis accuracyMyocardial blood flowEstimation accuracyFrame conversionPositron emission tomographyNovel methodImage qualityPET datasetsRegistration techniqueNetworkCardiac positron emission tomographyBlood flowDynamic cardiac positron emission tomographyMotion correctionCoronary artery diseaseMulti-Task Learning for Motion Analysis and Segmentation in 3D Echocardiography
Ta K, Ahn S, Thorn S, Stendahl J, Zhang X, Langdon J, Staib L, Sinusas A, Duncan J. Multi-Task Learning for Motion Analysis and Segmentation in 3D Echocardiography. IEEE Transactions On Medical Imaging 2024, 43: 2010-2020. PMID: 38231820, PMCID: PMC11514714, DOI: 10.1109/tmi.2024.3355383.Peer-Reviewed Original ResearchMulti-task learning networkCross-stitch unitsComposite loss functionAccurate motion estimationTask-specific networksMotion estimationSegmentation masksLearning networkLoss functionSegmentation stepEchocardiography datasetNetworkMotion displacementMotion analysisMultiple time framesTaskAnalysis pipelineSegmentsStrain measurementsDatasetRepresentation
2023
Dual-Domain Iterative Network with Adaptive Data Consistency for Joint Denoising and Few-Angle Reconstruction of Low-Dose Cardiac SPECT
Chen X, Zhou B, Xie H, Guo X, Liu Q, Sinusas A, Liu C. Dual-Domain Iterative Network with Adaptive Data Consistency for Joint Denoising and Few-Angle Reconstruction of Low-Dose Cardiac SPECT. Lecture Notes In Computer Science 2023, 14307: 49-59. DOI: 10.1007/978-3-031-44917-8_5.Peer-Reviewed Original ResearchIterative networkAuxiliary modulesJoint denoisingLow reconstruction accuracySource codeData consistencyNetwork performanceAblation studiesReconstruction accuracyCardiac SPECTConsistency moduleHardware expensePrediction accuracyAngle reconstructionNetworkDenoisingImage noiseAngle projectionsModuleADC moduleAccuracyReconstructionImagesMPI dataCodeTransformer-Based Dual-Domain Network for Few-View Dedicated Cardiac SPECT Image Reconstructions
Xie H, Zhou B, Chen X, Guo X, Thorn S, Liu Y, Wang G, Sinusas A, Liu C. Transformer-Based Dual-Domain Network for Few-View Dedicated Cardiac SPECT Image Reconstructions. Lecture Notes In Computer Science 2023, 14229: 163-172. DOI: 10.1007/978-3-031-43999-5_16.Peer-Reviewed Original ResearchDual-domain networkSPECT image reconstructionImage reconstructionDeep learning methodsPrevious baseline methodsCardiac SPECT imagesHigh-quality imagesReconstruction networkIterative reconstruction processView reconstructionBaseline methodsReconstruction outputLearning methodsClinical softwareReconstruction processImaging problemsProjection dataImage qualityNetworkImagesStationary dataSPECT scannerDiagnosis of CVDLimited amountSoftwareSegmentation-Free PVC for Cardiac SPECT Using a Densely-Connected Multi-Dimensional Dynamic Network
Xie H, Liu Z, Shi L, Greco K, Chen X, Zhou B, Feher A, Stendahl J, Boutagy N, Kyriakides T, Wang G, Sinusas A, Liu C. Segmentation-Free PVC for Cardiac SPECT Using a Densely-Connected Multi-Dimensional Dynamic Network. IEEE Transactions On Medical Imaging 2023, 42: 1325-1336. PMID: 36459599, PMCID: PMC10204821, DOI: 10.1109/tmi.2022.3226604.Peer-Reviewed Original Research
2022
Co-attention spatial transformer network for unsupervised motion tracking and cardiac strain analysis in 3D echocardiography
Ahn S, Ta K, Thorn S, Onofrey J, Melvinsdottir I, Lee S, Langdon J, Sinusas A, Duncan J. Co-attention spatial transformer network for unsupervised motion tracking and cardiac strain analysis in 3D echocardiography. Medical Image Analysis 2022, 84: 102711. PMID: 36525845, PMCID: PMC9812938, DOI: 10.1016/j.media.2022.102711.Peer-Reviewed Original ResearchConceptsSpatial transformer networkMotion trackingNoisy displacement fieldReliable motion estimationMotion tracking methodCardiac strain analysisTransformer networkDisplacement fieldDisplacement pathsMotion fieldTracking methodMotion estimationExperimental resultsStrain analysisSuperior performanceTemporal constraintsCardiac motionTrackingRegularization functionDependent featuresEchocardiography imagesNetworkPrior assumptionsFieldDual-Branch Squeeze-Fusion-Excitation Module for Cross-Modality Registration of Cardiac SPECT and CT
Chen X, Zhou B, Xie H, Guo X, Zhang J, Sinusas A, Onofrey J, Liu C. Dual-Branch Squeeze-Fusion-Excitation Module for Cross-Modality Registration of Cardiac SPECT and CT. Lecture Notes In Computer Science 2022, 13436: 46-55. DOI: 10.1007/978-3-031-16446-0_5.Peer-Reviewed Original ResearchConvolutional neural networkCross-modality registrationFeature fusionPrevious convolutional neural networkEarly feature fusionCross-modality informationMultiple convolutional layersMedical image registrationLow registration errorCardiac SPECTConvolutional layersCNN moduleImage featuresLate fusionSource codeNeural networkExcitation moduleInput modalitiesImage registrationSpatial featuresMultiple modalitiesRegistration errorPrevious methodsRigid registrationNetworkDeep-Learning-Based Few-Angle Cardiac SPECT Reconstruction Using Transformer
Xie H, Thorn S, Liu Y, Lee S, Liu Z, Wang G, Sinusas A, Liu C. Deep-Learning-Based Few-Angle Cardiac SPECT Reconstruction Using Transformer. IEEE Transactions On Radiation And Plasma Medical Sciences 2022, 7: 33-40. PMID: 37397179, PMCID: PMC10312390, DOI: 10.1109/trpms.2022.3187595.Peer-Reviewed Original ResearchConvolutional neural networkLimitations of CNNMedical imaging tasksDeep U-NetImage reconstruction taskCardiac SPECT imagesComputer visionVision TransformerConvolutional kernelsTransformer networkAttention blockInput imageU-NetNeural networkMemory burdenImage sizeInductive biasInformative featuresImage volumesImaging tasksTesting dataNetworkWhole 3D volumeNetwork structureCardiac single photon emission
2017
Flow Network Based Cardiac Motion Tracking Leveraging Learned Feature Matching
Parajuli N, Lu A, Stendahl J, Zontak M, Boutagy N, Alkhalil I, Eberle M, Lin B, O’Donnell M, Sinusas A, Duncan J. Flow Network Based Cardiac Motion Tracking Leveraging Learned Feature Matching. Lecture Notes In Computer Science 2017, 10434: 279-286. DOI: 10.1007/978-3-319-66185-8_32.Peer-Reviewed Original ResearchCardiac motion trackingNeural networkMotion trackingTedious feature engineeringSiamese neural networkMotion tracking methodFeature engineeringSiamese networkFeature matchingGraph nodesImage patchesSpatiotemporal problemsTracking algorithmTracking methodEdge weightsNetworkLinear programmingConsistent constraintsAdditional important contributionTrackingAlgorithmDatasetProgrammingNodesMatching