2014
Analysis of Multiple Tsetse Fly Populations in Uganda Reveals Limited Diversity and Species-Specific Gut Microbiota
Aksoy E, Telleria EL, Echodu R, Wu Y, Okedi LM, Weiss BL, Aksoy S, Caccone A. Analysis of Multiple Tsetse Fly Populations in Uganda Reveals Limited Diversity and Species-Specific Gut Microbiota. Applied And Environmental Microbiology 2014, 80: 4301-4312. PMID: 24814785, PMCID: PMC4068677, DOI: 10.1128/aem.00079-14.Peer-Reviewed Original ResearchConceptsDifferent tsetse speciesRRNA gene clone librariesDifferent sympatric speciesGene clone librariesTsetse speciesLimited diversityQuantitative PCRV4 hypervariable regionGut microbiotaGut microbial abundanceSympatric speciesGut microbial diversityClone librariesMicrobial diversityMicrobial abundanceField fliesRRNA geneHost physiologyTsetse fly populationsDeep sequencingReduced diversityDifferent speciesFly populationsSpeciesWigglesworthia
2006
Molecular phylogeny and historical biogeography of the land snail genus Solatopupa (Pulmonata) in the peri-Tyrrhenian area
Ketmaier V, Giusti F, Caccone A. Molecular phylogeny and historical biogeography of the land snail genus Solatopupa (Pulmonata) in the peri-Tyrrhenian area. Molecular Phylogenetics And Evolution 2006, 39: 439-451. PMID: 16442313, DOI: 10.1016/j.ympev.2005.12.008.Peer-Reviewed Original ResearchConceptsMolecular clock estimatesClock estimatesPeri-Tyrrhenian areaSardinia-Corsica microplateMain cladogenetic eventsNuclear genesVicariant processesCladogenetic eventsHistorical biogeographyMolecular phylogenyPhylogenetic resultsPhylogenetic relationshipsEvolutionary historyPhylogenetic hypothesisSister taxaInsular rangeGenetic relationshipsCalcareous substratesCorsica-Sardinia microplateMiddle–late PlioceneGenusSpeciesItalian peninsulaMiddle MioceneElba Island
2003
Xantusiid “night” lizards: a puzzling phylogenetic problem revisited using likelihood-based Bayesian methods on mtDNA sequences
Vicario S, Caccone A, Gauthier J. Xantusiid “night” lizards: a puzzling phylogenetic problem revisited using likelihood-based Bayesian methods on mtDNA sequences. Molecular Phylogenetics And Evolution 2003, 26: 243-261. PMID: 12565035, DOI: 10.1016/s1055-7903(02)00313-5.Peer-Reviewed Original ResearchConceptsDivergence time estimatesXantusia riversianaCytochrome b geneMaximum parsimony analysisCalifornia Channel IslandsLikelihood-based Bayesian methodsIsland endemicsMitochondrial genesLizard evolutionAncestral stateScleroglossan lizardsRibosomal genesMtDNA sequencesPhylogenetic problemsCrown cladeAdditional cladesPhylogenetic analysisNeighbor-JoiningParsimony analysisB geneBoundary bolide impactRock crevicesCladeMaximum likelihoodXantusia
2002
The evolutionary origin of Indian Ocean tortoises (Dipsochelys)
Palkovacs E, Gerlach J, Caccone A. The evolutionary origin of Indian Ocean tortoises (Dipsochelys). Molecular Phylogenetics And Evolution 2002, 24: 216-227. PMID: 12144758, DOI: 10.1016/s1055-7903(02)00211-7.Peer-Reviewed Original ResearchConceptsWestern Indian Ocean islandsGiant tortoisesIndian Ocean islandsIndian Ocean giant tortoisesIndian OceanCyt b geneDNA substitution ratesOcean islandsShort generation timeSmall body sizeSource of colonizationMalagasy lineagesEvolutionary originWestern Indian OceanWild populationsMitochondrial DNAPhylogenetic analysisSequence evolutionB geneSubstitution ratesBody sizeOcean currentsEast coastGeneration timeTortoises
1997
Mitochondrial DNA Rates and Biogeography in European Newts (Genus Euproctus)
Caccone A, Milinkovitch M, Sbordoni V, Powell J. Mitochondrial DNA Rates and Biogeography in European Newts (Genus Euproctus). Systematic Biology 1997, 46: 126-144. PMID: 11975350, DOI: 10.1093/sysbio/46.1.126.Peer-Reviewed Original ResearchConceptsCytochrome b geneB geneDivergence timesMitochondrial DNA genesTime of divergenceMolecular clock hypothesisSardinia-Corsica microplateRate of evolutionMtDNA rateGene flowCladogenic eventsVicariant eventsMolecular divergenceTajima's testSequence divergenceRibosomal genesDNA genesPhylogenetic perspectiveVicariant distributionPhylogenetic studiesEuropean newtsRibosomal RNAClock hypothesisSequence dataRate heterogeneity