2015
Mitochondrial DNA sequence divergence and diversity of Glossina fuscipes fuscipes in the Lake Victoria basin of Uganda: implications for control
Kato AB, Hyseni C, Okedi LM, Ouma JO, Aksoy S, Caccone A, Masembe C. Mitochondrial DNA sequence divergence and diversity of Glossina fuscipes fuscipes in the Lake Victoria basin of Uganda: implications for control. Parasites & Vectors 2015, 8: 385. PMID: 26197892, PMCID: PMC4511262, DOI: 10.1186/s13071-015-0984-1.Peer-Reviewed Original ResearchConceptsMicrosatellite loci dataDemographic historyGenetic differentiationMicrosatellite dataLoci dataMitochondrial DNA (mtDNA) cytochrome oxidase II geneGenetic variationMitochondrial DNA sequence divergenceCytochrome oxidase II geneWeak genetic differentiationDNA sequence divergenceLake Victoria basinGenetic structuringGene flowDemographic testsGenetic divergenceMtDNA dataSequence divergenceGenetic diversityGeographic distanceVictoria basinGenetic analysisSampling sitesMutation ratePopulation clusters
2006
An analysis of species boundaries and biogeographic patterns in a cryptic species complex: The rotifer—Brachionus plicatilis
Suatoni E, Vicario S, Rice S, Snell T, Caccone A. An analysis of species boundaries and biogeographic patterns in a cryptic species complex: The rotifer—Brachionus plicatilis. Molecular Phylogenetics And Evolution 2006, 41: 86-98. PMID: 16815046, DOI: 10.1016/j.ympev.2006.04.025.Peer-Reviewed Original ResearchConceptsCryptic species complexSpecies conceptSpecies boundariesCryptic complexesSpecies complexRotifer Brachionus plicatilisGenealogical species conceptMolecular sequence divergenceBiological species conceptEvidence of isolationMultiple species conceptsDifferent species conceptsLarge geographic scalesReproductive isolationMolecular phylogeneticsSpecies hypothesesBiogeographic patternsPhylogenetic dataSequence divergencePassive dispersalLarge vertebratesMarine invertebratesPhylogenetic studiesReproductive successCosmopolitan speciesGenetic Divergence of Connecticut Melanoplus femurrubrum Populations
Lee J, Marshall J, Schmitz O, Caccone A. Genetic Divergence of Connecticut Melanoplus femurrubrum Populations. Journal Of Heredity 2006, 97: 290-293. PMID: 16598036, DOI: 10.1093/jhered/esj027.Peer-Reviewed Original ResearchConceptsGenetic diversityHigh mitochondrial diversityNuclear gene regionsAT-rich genesHigh sequence divergenceFixation index analysisMultiple genetic markersPhylogeographic patternsMitochondrial diversityMolecular varianceGenetic divergenceSequence divergenceEqual diversityGenetic variationLittle divergenceGene regionGenetic markersPopulation-level studiesITS1 geneGenesDiversityDivergenceSmall geographic areasND2Species
2005
Development of primers to characterize the mitochondrial control region of Galápagos land and marine iguanas (Conolophus and Amblyrhynchus)
HANLEY T, CACCONE A. Development of primers to characterize the mitochondrial control region of Galápagos land and marine iguanas (Conolophus and Amblyrhynchus). Molecular Ecology Resources 2005, 5: 599-601. DOI: 10.1111/j.1471-8286.2005.01004.x.Peer-Reviewed Original Research
1999
Cytochrome b sequence divergence in the European sea bass (Dicentrarchus labrax) and phylogenetic relationships among some Perciformes species
Allegrucci G, Caccone A, Sbordoni V. Cytochrome b sequence divergence in the European sea bass (Dicentrarchus labrax) and phylogenetic relationships among some Perciformes species. Journal Of Zoological Systematics & Evolutionary Research 1999, 37: 149-156. DOI: 10.1111/j.1439-0469.1999.00115.x.Peer-Reviewed Original ResearchEuropean sea bassEvolutionary relationshipsB geneCytochrome b sequence divergenceMitochondrial DNA D-loop variationEntire cytochrome b geneCyt b sequencesSpecies of PerciformesCyt b geneCytochrome b geneSea bassD-loop variationsPerciformes fishNorthwestern populationsSequence divergencePhylogenetic relationshipsD. punctatusPerciformes speciesB sequencesD. labraxPolymorphic DNADicentrarchus labraxLack of resolutionMediterranean populationsFamily level
1997
Mitochondrial DNA Rates and Biogeography in European Newts (Genus Euproctus)
Caccone A, Milinkovitch M, Sbordoni V, Powell J. Mitochondrial DNA Rates and Biogeography in European Newts (Genus Euproctus). Systematic Biology 1997, 46: 126-144. PMID: 11975350, DOI: 10.1093/sysbio/46.1.126.Peer-Reviewed Original ResearchConceptsCytochrome b geneB geneDivergence timesMitochondrial DNA genesTime of divergenceMolecular clock hypothesisSardinia-Corsica microplateRate of evolutionMtDNA rateGene flowCladogenic eventsVicariant eventsMolecular divergenceTajima's testSequence divergenceRibosomal genesDNA genesPhylogenetic perspectiveVicariant distributionPhylogenetic studiesEuropean newtsRibosomal RNAClock hypothesisSequence dataRate heterogeneity