2024
A circadian clock output functions independently of phyB to sustain daytime PIF3 degradation
Liu W, Lowrey H, Xu A, Leung C, Adamchek C, He J, Du J, Chen M, Gendron J. A circadian clock output functions independently of phyB to sustain daytime PIF3 degradation. Proceedings Of The National Academy Of Sciences Of The United States Of America 2024, 121: e2408322121. PMID: 39163340, PMCID: PMC11363348, DOI: 10.1073/pnas.2408322121.Peer-Reviewed Original ResearchConceptsPhytochrome-interacting factorsF-boxRed-light photoreceptor phytochrome BPhotoreceptor phytochrome BCircadian clock outputE3 ubiquitin ligaseDownstream biological processesPhyB signalingGrowth-regulating mechanismsTranscriptional connectionsPhytochrome BClock's roleRhythmic transcriptionUbiquitin ligaseClock regulationGenetic evidenceMonochromatic red lightProtein stabilityCircadian clockPhyBBiological processesPlant growthClock outputCircadian expressionRegulation mechanism
2009
Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays
Hazen SP, Naef F, Quisel T, Gendron JM, Chen H, Ecker JR, Borevitz JO, Kay SA. Exploring the transcriptional landscape of plant circadian rhythms using genome tiling arrays. Genome Biology 2009, 10: r17. PMID: 19210792, PMCID: PMC2688271, DOI: 10.1186/gb-2009-10-2-r17.Peer-Reviewed Original ResearchConceptsArabidopsis genomeCircadian clockCircadian clock regulationPlant circadian rhythmsSmall nucleolar RNAsGenome tiling arraysRhythmic expression patternCircadian rhythmClock regulationTranscriptional landscapeTiling arraysIntergenic regionNucleolar RNAsAntisense transcriptsUnbiased interrogationWhole genomeNoncoding regionsExpression patternsGenomeSense strandTranscriptsGenesProteinUnbiased analysisIntrons