2024
A process to reanalyze clinical DNA sequencing data for biomarker matching in the Lung-MAP Master Protocol
Neal J, Minichiello K, Brennick R, Huang R, Hiemenz M, Amler C, Patel J, Herbst R, Reckamp K, Borghaei H, Highleyman L, Redman M, Pasquina L, Kozono D. A process to reanalyze clinical DNA sequencing data for biomarker matching in the Lung-MAP Master Protocol. The Oncologist 2024, 29: e843-e847. PMID: 38597608, PMCID: PMC11144964, DOI: 10.1093/oncolo/oyae062.Peer-Reviewed Original ResearchLung mappingClinical trialsStandard-of-care testingTumor genomic profilingClinical trial assayMaster protocolDNA sequence dataRaw genomic dataMedian timeBioinformatics pipelineSequence dataGenomic dataBiomarker testingGenomic profilingCancer clinical trialsMolecular resultsTissue samplesPatientsSubstudy
2021
Practical Considerations Relating to Routine Clinical Biomarker Testing for Non–small Cell Lung Cancer: Focus on Testing for RET Fusions
Herbst RS, Aisner DL, Sonett JR, Turk AT, Weintraub JL, Lindeman NI. Practical Considerations Relating to Routine Clinical Biomarker Testing for Non–small Cell Lung Cancer: Focus on Testing for RET Fusions. Frontiers In Medicine 2021, 7: 562480. PMID: 33553195, PMCID: PMC7859651, DOI: 10.3389/fmed.2020.562480.Peer-Reviewed Original ResearchNon-small cell lung cancerCell lung cancerLung cancerAdvanced non-small cell lung cancerGenomic profilingExpert consensus guidanceMultidisciplinary advisory boardAccurate histopathological diagnosisGenomic screening programDrug Administration approvalProto-oncogene tyrosine-protein kinase receptor RetNumber of biomarkersStandard careInvestigational agentsTargetable alterationsHistopathological diagnosisRET fusionsActionable biomarkersAdministration approvalBiomarker testingScreening programSurgical pathologistsSpecific small molecule inhibitorsTreatment selectionBiopsy tissue
2017
Disparities in next generation sequencing in a population-based community cohort of patients with advanced non-small cell lung cancer.
Presley C, Soulos P, Chiang A, Longtine J, Adelson K, Herbst R, Nussbaum N, Sorg R, Abernethy A, Agarwala V, Gross C. Disparities in next generation sequencing in a population-based community cohort of patients with advanced non-small cell lung cancer. Journal Of Clinical Oncology 2017, 35: 6563-6563. DOI: 10.1200/jco.2017.35.15_suppl.6563.Peer-Reviewed Original ResearchNon-small cell lung cancerAdvanced non-small cell lung cancerCell lung cancerNGS testingLung cancerBiomarker testingOncology practiceNext-generation sequencingNon-squamous non-small cell lung cancerPopulation-based community cohortReal-world clinical practiceMulti-gene panel testingInsurance-related disparitiesAdvanced lung cancerFirst-line treatmentHistory of smokingRetrospective observational studyElectronic health record dataWorld clinical practiceClustering of patientsHealth record dataYounger patientsMedian agePatient characteristicsWhite patients