Sheila Nagamatsu, PhD
Postdoctoral Associate
Research & Publications
Biography
News
Coauthors
Selected Publications
- 21. ADVANCING THE UNDERSTANDING OF DEPRESSION GENETICS: AN INTRODUCTION TO THE MAJOR DEPRESSION WORKING GROUP OF THE LATIN AMERICAN GENOMICS CONSORTIUM.Corral-Frias N, Nunez D, Ota V, Cárcamo J, Machado C, Amaya L, Toledo M, Nagamatsu S, Group L, Dunn E, Torres-Hernández B, Lattig C, Giusti-Rodriguez P, Montalvo-Ortiz J, Peterson R. 21. ADVANCING THE UNDERSTANDING OF DEPRESSION GENETICS: AN INTRODUCTION TO THE MAJOR DEPRESSION WORKING GROUP OF THE LATIN AMERICAN GENOMICS CONSORTIUM. European Neuropsychopharmacology 2023, 75: s68. DOI: 10.1016/j.euroneuro.2023.08.132.
- Profiling neuronal methylome and hydroxymethylome of opioid use disorder in the human orbitofrontal cortexRompala G, Nagamatsu S, Martínez-Magaña J, Nuñez-Ríos D, Wang J, Girgenti M, Krystal J, Gelernter J, Hurd Y, Montalvo-Ortiz J. Profiling neuronal methylome and hydroxymethylome of opioid use disorder in the human orbitofrontal cortex. Nature Communications 2023, 14: 4544. PMID: 37507366, PMCID: PMC10382503, DOI: 10.1038/s41467-023-40285-y.
- CpH methylome analysis in human cortical neurons identifies novel gene pathways and drug targets for opioid use disorderNagamatsu S, Rompala G, Hurd Y, Núñez-Rios D, Montalvo-Ortiz J, Group T, Alvarez V, Benedek D, Che A, Cruz D, Davis D, Girgenti M, Hoffman E, Holtzheimer P, Huber B, Kaye A, Krystal J, Labadorf A, Keane T, Logue M, McKee A, Marx B, Mash D, Miller M, Noller C, JM-O, Scott W, Schnurr P, Stein T, Ursano R, Williamson D, Wolf E, Young K. CpH methylome analysis in human cortical neurons identifies novel gene pathways and drug targets for opioid use disorder. Frontiers In Psychiatry 2023, 13: 1078894. PMID: 36745154, PMCID: PMC9892724, DOI: 10.3389/fpsyt.2022.1078894.
- Dissecting the epigenomic differences between smoking and nicotine dependence in a veteran cohortNagamatsu S, Pietrzak R, Xu K, Krystal J, Gelernter J, Montalvo‐Ortiz J. Dissecting the epigenomic differences between smoking and nicotine dependence in a veteran cohort. Addiction Biology 2022, 28: e13259. PMID: 36577721, DOI: 10.1111/adb.13259.
- Psychosocial Factors Associated With Accelerated GrimAge in Male U.S. Military VeteransTamman AJF, Nagamatsu S, Krystal JH, Gelernter J, Montalvo-Ortiz JL, Pietrzak RH. Psychosocial Factors Associated With Accelerated GrimAge in Male U.S. Military Veterans. American Journal Of Geriatric Psychiatry 2022, 31: 97-109. PMID: 36210262, DOI: 10.1016/j.jagp.2022.09.002.
- Association of Symptoms of Posttraumatic Stress Disorder and GrimAge, an Epigenetic Marker of Mortality Risk, in US Military Veterans.Na PJ, Montalvo-Ortiz JL, Nagamatsu ST, Southwick SM, Krystal JH, Gelernter J, Pietrzak RH. Association of Symptoms of Posttraumatic Stress Disorder and GrimAge, an Epigenetic Marker of Mortality Risk, in US Military Veterans. The Journal Of Clinical Psychiatry 2022, 83 PMID: 35802930, PMCID: PMC10859885, DOI: 10.4088/jcp.21br14309.
- Rational engineering of industrial S. cerevisiae: towards xylitol production from sugarcane strawde Mello FDSB, Maneira C, Suarez FUL, Nagamatsu S, Vargas B, Vieira C, Secches T, Coradini ALV, de Carvalho Silvello M, Goldbeck R, Pereira GAG, Teixeira GS. Rational engineering of industrial S. cerevisiae: towards xylitol production from sugarcane straw. Journal Of Genetic Engineering And Biotechnology 2022, 20: 80. PMID: 35612634, PMCID: PMC9133290, DOI: 10.1186/s43141-022-00359-8.
- Genetic variation in symbiotic islands of natural variant strains of soybean Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens differing in competitiveness and in the efficiency of nitrogen fixationBender FR, Nagamatsu ST, Delamuta JRM, Ribeiro RA, Nogueira MA, Hungria M. Genetic variation in symbiotic islands of natural variant strains of soybean Bradyrhizobium japonicum and Bradyrhizobium diazoefficiens differing in competitiveness and in the efficiency of nitrogen fixation. Microbial Genomics 2022, 8: 000795. PMID: 35438622, PMCID: PMC9453064, DOI: 10.1099/mgen.0.000795.
- Internode elongation in energy cane shows remarkable clues on lignocellulosic biomass biosynthesis in Saccharum hybridsYanagui K, Camargo ELO, Abreu LGF, Nagamatsu ST, Fiamenghi MB, Silva NV, Carazzolle MF, Nascimento LC, Franco SF, Bressiani JA, Mieczkowski PA, Grassi MCB, Pereira GAG. Internode elongation in energy cane shows remarkable clues on lignocellulosic biomass biosynthesis in Saccharum hybrids. Gene 2022, 828: 146476. PMID: 35413393, DOI: 10.1016/j.gene.2022.146476.
- DNA methylation changes in African American women with a history of preterm birth from the InterGEN studyBarcelona V, Montalvo-Ortiz JL, Wright ML, Nagamatsu ST, Dreisbach C, Crusto CA, Sun YV, Taylor JY. DNA methylation changes in African American women with a history of preterm birth from the InterGEN study. BMC Genomic Data 2021, 22: 30. PMID: 34482817, PMCID: PMC8418749, DOI: 10.1186/s12863-021-00988-x.
- Liga Brasileira de Bioinformática: Desafios para estimular a formação de estudantes de Bioinformática e Biologia ComputacionalNagamatsu S, Costa M, dos Santos R, de Carvalho L, Fonseca Júnior N, da Silva V, de Jesus D, Aburjaile F, García G, Pereira G, Câmara A, Neves M, Coelho M, Horácio E. Liga Brasileira de Bioinformática: Desafios para estimular a formação de estudantes de Bioinformática e Biologia Computacional. 2021 DOI: 10.51780/978-6-599-275326-18.
- Ethanol production process driving changes on industrial strainsNagamatsu ST, Coutouné N, José J, Fiamenghi MB, Pereira GAG, de Castro Oliveira J, Carazzolle MF. Ethanol production process driving changes on industrial strains. FEMS Yeast Research 2021, 21: foaa071. PMID: 33417685, DOI: 10.1093/femsyr/foaa071.
- PIPELINE DE EXPRESSÃO DIFERENCIAL EM R APLICADO À Arabidopsis thalianaNagamatsu S, Carvalho L, Mofatto L, Silva N, Carazzolle M, Pereira G. PIPELINE DE EXPRESSÃO DIFERENCIAL EM R APLICADO À Arabidopsis thaliana. 2020, 122-137. DOI: 10.22533/at.ed.35520090311.
- INFLUÊNCIA DA SUPLEMENTAÇÃO POR FLAVONOIDE NO CRESCIMENTO DE CLONES COMERCIAIS DE E. urophylla E E. urograndisSilva N, Mofatto L, Rebouças M, Carvalho L, Nagamatsu S, Carazzolle M, Lepikson Neto J, Pereira G. INFLUÊNCIA DA SUPLEMENTAÇÃO POR FLAVONOIDE NO CRESCIMENTO DE CLONES COMERCIAIS DE E. urophylla E E. urograndis. 2020, 150-165. DOI: 10.22533/at.ed.35520090313.
- Expected Genotype Quality and Diploidized Marker Data from Genotyping‐by‐Sequencing of Urochloa spp. TetraploidsMatias FI, Meireles K, Nagamatsu ST, Barrios S, do Valle C, Carazzolle MF, Fritsche‐Neto R, Endelman JB. Expected Genotype Quality and Diploidized Marker Data from Genotyping‐by‐Sequencing of Urochloa spp. Tetraploids. The Plant Genome 2019, 12: 1-9. PMID: 33016594, DOI: 10.3835/plantgenome2019.01.0002.
- Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylationMaldonado MBC, de Rezende Neto NB, Nagamatsu ST, Carazzolle MF, Hoff JL, Whitacre LK, Schnabel RD, Behura SK, McKay SD, Taylor JF, Lopes FL. Identification of bovine CpG SNPs as potential targets for epigenetic regulation via DNA methylation. PLOS ONE 2019, 14: e0222329. PMID: 31513639, PMCID: PMC6742455, DOI: 10.1371/journal.pone.0222329.
- Fungal L-asparaginase: Strategies for production and food applicationsda Cunha MC, Dos Santos Aguilar JG, de Melo RR, Nagamatsu ST, Ali F, de Castro RJS, Sato HH. Fungal L-asparaginase: Strategies for production and food applications. Food Research International 2019, 126: 108658. PMID: 31732030, DOI: 10.1016/j.foodres.2019.108658.
- Bioinformatics applied to biotechnology: A review towards bioenergy researchde Carvalho L, Borelli G, Camargo A, de Assis M, de Ferraz S, Fiamenghi M, José J, Mofatto L, Nagamatsu S, Persinoti G, Silva N, Vasconcelos A, Pereira G, Carazzolle M. Bioinformatics applied to biotechnology: A review towards bioenergy research. Biomass And Bioenergy 2019, 123: 195-224. DOI: 10.1016/j.biombioe.2019.02.016.
- Genome Assembly of a Highly Aldehyde-Resistant Saccharomyces cerevisiae SA1-Derived Industrial StrainNagamatsu ST, Teixeira GS, de Mello FDSB, Tizei PAG, Nakagawa BTG, de Carvalho LM, Pereira GAG, Carazzolle MF. Genome Assembly of a Highly Aldehyde-Resistant Saccharomyces cerevisiae SA1-Derived Industrial Strain. Microbiology Resource Announcements 2019, 8: e00071-19. PMID: 30923240, PMCID: PMC6439243, DOI: 10.1128/mra.00071-19.
- Global analysis of erythroid cells redox status reveals the involvement of Prdx1 and Prdx2 in the severity of beta thalassemiaRomanello KS, Teixeira KKL, Silva JPMO, Nagamatsu ST, Bezerra MAC, Domingos IF, Martins DAP, Araujo AS, Lanaro C, Breyer CA, Ferreira RA, Franco-Penteado C, Costa FF, Malavazi I, Netto LES, de Oliveira MA, Cunha AF. Global analysis of erythroid cells redox status reveals the involvement of Prdx1 and Prdx2 in the severity of beta thalassemia. PLOS ONE 2018, 13: e0208316. PMID: 30521599, PMCID: PMC6283586, DOI: 10.1371/journal.pone.0208316.
- New contributions for industrial n-butanol fermentation: An optimized Clostridium strain and the use of xylooligosaccharides as a fermentation additiveGrassi M, Carazzolle M, Nakagawa B, Ferrari A, Nagamatsu S, Santos C, Murakami M, Pirolla R, Pereira G. New contributions for industrial n-butanol fermentation: An optimized Clostridium strain and the use of xylooligosaccharides as a fermentation additive. Biomass And Bioenergy 2018, 119: 304-313. DOI: 10.1016/j.biombioe.2018.09.012.
- Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strainsdos Santos LV, Carazzolle MF, Nagamatsu ST, Sampaio NM, Almeida LD, Pirolla RA, Borelli G, Corrêa TL, Argueso JL, Pereira GA. Unraveling the genetic basis of xylose consumption in engineered Saccharomyces cerevisiae strains. Scientific Reports 2016, 6: 38676. PMID: 28000736, PMCID: PMC5175268, DOI: 10.1038/srep38676.