2022
US-align: universal structure alignments of proteins, nucleic acids, and macromolecular complexes
Zhang C, Shine M, Pyle AM, Zhang Y. US-align: universal structure alignments of proteins, nucleic acids, and macromolecular complexes. Nature Methods 2022, 19: 1109-1115. PMID: 36038728, DOI: 10.1038/s41592-022-01585-1.Peer-Reviewed Original ResearchConceptsStructure comparisonStructural biology studiesStructure alignmentDNA dockingMacromolecular complexesBiology studiesMultiple structure alignmentNucleic acidsDifferent moleculesRNAProteinFundamental importanceDNAComplex structureDockingUniversal protocolAlignmentExtensive optimizationFunctionComplexes
2014
The Linker Region of NS3 Plays a Critical Role in the Replication and Infectivity of Hepatitis C Virus
Kohlway A, Pirakitikulr N, Ding SC, Yang F, Luo D, Lindenbach BD, Pyle AM. The Linker Region of NS3 Plays a Critical Role in the Replication and Infectivity of Hepatitis C Virus. Journal Of Virology 2014, 88: 10970-10974. PMID: 24965468, PMCID: PMC4178846, DOI: 10.1128/jvi.00745-14.Peer-Reviewed Original Research