Skip to Main Content

Jose Gomez Villalobos, MD, MS

Associate Professor of Medicine (Pulmonary); Affiliated Faculty, Yale Institute for Global Health

Contact Information

Jose Gomez Villalobos, MD, MS

Patient Care Locations

Mailing Address

  • Pulmonary, Critical Care & Sleep Medicine

    300 Cedar Street, TAC–441 South, P.O. Box 208057

    New Haven, CT 06520-8057

    United States


Education & Training

  • MS
    Yale University Graduate School of Arts and Sciences, Computational Biology and Bioinformatics (2012)
  • Fellow
    Yale University School of Medicine (2012)
  • Residency
    Hospital of Saint Raphael, New Haven, CT (2007)
  • Graduate Teaching Assistant
    Pontificia Universidad Javeriana (1999)
  • MD
    Pontificia Universidad Javeriana (1999)


  • Grand Rounds: Precision Medicine in Asthma 2020
    Louisville, United States 2020
  • COVID-19 Preclinical Models, COVID-19 Coagulopathy and NHLBI update
    Philadelphia, United States 2020
  • Genomics of SARS-CoV-2
    Philadelphia, United States 2020
  • Current Understanding of COVID-19 Pathophysiology
    Philadelphia, United States 2020
  • Data Science Applications to Emerging Infections (COVID-19)
    Bethesda, United States 2020
  • Blood RNA Profiling with a Portable Sequencer to Identify Asthma Endotypes
    Dallas, United States 2019
  • MicroRNA miR-223 is Associated with Lung Function Impairment and TH17 Inflammation in Asthma
    Dallas, United States 2019
  • IgA-Seq of The Airway Microbiota in Severe Asthma
    San Diego, United States 2018
  • Microbial Profiles of Severe Asthma Exacerbations Requiring Admission to Intensive Care
    San Diego, United States 2018
  • Webinar: Asthma Transcriptomics for Precision Medicine
    Bogota, Colombia 2018
  • Precision Medicine in Asthma
    Mexico City, Mexico 2018
  • Severe Ssthma: From Phenotypes to Endotypes
    Mexico City, Mexico 2018
  • What Got You Here Won't Get You There: Strategies for Innovation Using Computational Biology
    Toronto, Canada 2017
  • DNA Repair Genes are Differentially Expressed in COPD
    San Francisco, United States 2016
  • Clinical and Molecular Characterization of the YKL-40 Severe Asthma Endotypes
    San Francisco, United States 2016
  • Omics in Asthma
    Santiago, Chile 2016
  • Transcriptomics in Lung Disease
    Santiago, Chile 2016
  • The rs12141494 Polymorphism in CHI3L1 is Associated with Asthma Severity and Airway Expression of YKL-40
    Denver, United States 2015
  • Airway Epithelial Histone Deacetylase 9 is Activated in Respiratory Viral Infection
    Denver, United States 2015
  • Th2 and YKL-40 Profiles in the Blood and Sputum of Severe Asthmatics in the Yale Center for Asthma and Airway Disease
    Aspen, United States 2015
  • Introduction to pulmonary genomic data-mining using open data and free online resources
    Denver, United States 2015
  • Phenotyping Asthma at the Dawn of Precision Medicine
    New York, United States 2015
  • Meta-analysis of the Published Asthma Transcriptome Identifies a Protocadherin-Gamma Cluster
    Philadelphia, United States 2013
  • Characterization of The Poor Emotional Function Phenotype In Asthma
    San Francisco, United States 2012
  • Characterization of Chitinase Activity In Patients With Stable Asthma
    Denver, United States 2011
  • The Role Of Neurite Outgrowth Inhibitory Protein-B In Poorly Controlled Asthma
    Denver, United States 2011
  • Airway Macrophage Expression Signatures Associated With Severe Airflow Obstruction In Asthma
    Denver, United States 2011
  • Characterization of Macrophage Signatures in Induced Sputum of Severe Asthmatics
    Bethesda, United States 2011
  • Characterization of Chitinase Activity and YKL-40 Expression in Induced Sputum from Asthmatics
    New Orleans, United States 2010
  • Late Fluid Management and Risk of Respiratory Failure in Septic Patients
    San Diego, United States 2009
  • Effects of Hypercapnia on Blood Pressure in Nagase Analbuminemic Rats
    Orlando, United States 2004

Honors & Recognition

AwardAwarding OrganizationDate
FellowAmerican Thoracic Society2019
Outstanding PGY-1 ResidentHospital of Saint Raphael2005

Professional Service

American Thoracic SocietyResearch Committee Member2019 - Present
American Thoracic Society, Allergy, Immunology and Inflammation AssemblyExecutive Committee Member2019 - Present
American Thoracic Society, Genetics and Genomics SectionExecutive Committee Member2016 - 2018
Spanish National Agency for Scientific Evaluation (ANEP)Reviewer2015
American Thoracic Society, Web Committee, Allergy, Immunology and Inflammation AssemblyCommittee Member2015 - Present
Pulmonary and Critical Care Fellowship Journal ClubCoordinator2014 - Present
Pulmonary and Critical Care Fellowship CurriculumCommittee Member2009 - 2012
Chest, American Journal of Respiratory and Critical Care Medicine, BMC Pulmonary Medicine, Journal of Preventive Medicine, Thorax, AJP Lung, Nature Communications, European Respiratory Journal, Respiratory ResearchReviewer2009 - Present

Departments & Organizations