2015
Distributions of Runs Revisited
Kong Y. Distributions of Runs Revisited. Communication In Statistics- Theory And Methods 2015, 44: 4663-4678. DOI: 10.1080/03610926.2013.793350.Peer-Reviewed Original Research
2007
Generalized Correlation Functions and Their Applications in Selection of Optimal Multiple Spaced Seeds for Homology Search
Kong Y. Generalized Correlation Functions and Their Applications in Selection of Optimal Multiple Spaced Seeds for Homology Search. Journal Of Computational Biology 2007, 14: 238-254. PMID: 17456017, DOI: 10.1089/cmb.2006.0008.Peer-Reviewed Original ResearchConceptsGeneralized correlation functionCorrelation functionsHigher order approximationsGoulden–Jackson cluster methodHeuristic search methodsOrder approximationProbability qAverage propertiesSearch methodCluster methodLarge genomic dataProbability of occurrenceTheoretical backgroundMultiple seedsSpaced seedsPowerful methodOptimal seedApproximationEmpirical observationsNumber of wildcardsSet of patternsProbabilityProblemFunctionMatrix
2006
Packing dimers on (2p+1)×(2q+1) lattices
Kong Y. Packing dimers on (2p+1)×(2q+1) lattices. Physical Review E 2006, 73: 016106. PMID: 16486215, DOI: 10.1103/physreve.73.016106.Peer-Reviewed Original ResearchSquare latticeNumber-theoretical propertiesLogarithmic termsMonomer-dimer problemFinite-size correctionsStatistical physics modelsNumber theoryExact solutionLattice stripsN latticePhysics modelsSize correctionsWidth NConfiguration numberLatticeComputational methodsFree energySingle vacancyUnexplored connectionsDistinct behaviorsTheoryTermsProblemSolutionEnergy