Featured Publications
Architecture of the Flaviviral Replication Complex PROTEASE, NUCLEASE, AND DETERGENTS REVEAL ENCASEMENT WITHIN DOUBLE-LAYERED MEMBRANE COMPARTMENTS*
Uchil P, Satchidanandam V. Architecture of the Flaviviral Replication Complex PROTEASE, NUCLEASE, AND DETERGENTS REVEAL ENCASEMENT WITHIN DOUBLE-LAYERED MEMBRANE COMPARTMENTS*. Journal Of Biological Chemistry 2003, 278: 24388-24398. PMID: 12700232, DOI: 10.1074/jbc.m301717200.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsCell LineDetergentsEndopeptidasesFlavivirusRibonucleasesRNA, ViralVirus ReplicationConceptsViral genomic RNAVesicle packetsMembrane compartmentsGenomic RNADouble-membrane compartmentsInner membrane vesiclesViral RNA speciesHost cell membraneHeavy membrane fractionNonionic detergent extractsRNA speciesReplicative intermediate RNAViral NS3Replication complexPrior trypsin treatmentMicrococcal nucleaseComplex proteaseMembranous sitesReplicative form RNASpecialized structuresActive proteinIntermediate RNAMembrane vesiclesMembrane fractionForm RNAPhylogenetic analysis of Japanese encephalitis virus: envelope gene based analysis reveals a fifth genotype, geographic clustering, and multiple introductions of the virus into the Indian subcontinent.
Uchil P, Satchidanandam V. Phylogenetic analysis of Japanese encephalitis virus: envelope gene based analysis reveals a fifth genotype, geographic clustering, and multiple introductions of the virus into the Indian subcontinent. American Journal Of Tropical Medicine And Hygiene 2001, 65: 242-51. PMID: 11561712, DOI: 10.4269/ajtmh.2001.65.242.Peer-Reviewed Original ResearchMeSH KeywordsAedesAmino Acid SequenceAnimalsBase SequenceCell LineCluster AnalysisDNA, ComplementaryEncephalitis Virus, JapaneseEncephalitis, JapaneseEvolution, MolecularGenes, envGenetic VariationGenotypeHumansIndiaMolecular Sequence DataPhylogenyReverse Transcriptase Polymerase Chain ReactionRNA, ViralSequence Homology, Amino AcidSequence Homology, Nucleic AcidSwine
2006
Organization of Flaviviral Replicase Proteins in Virus‐Induced Membranes: a Role for NS1′ in Japanese Encephalitis Virus RNA Synthesis
Satchidanandam V, Uchil PD, Kumar P. Organization of Flaviviral Replicase Proteins in Virus‐Induced Membranes: a Role for NS1′ in Japanese Encephalitis Virus RNA Synthesis. Novartis Foundation Symposia 2006, 277: 136-148. PMID: 17319159, DOI: 10.1002/0470058005.ch10.Peer-Reviewed Original ResearchNuclear Localization of Flavivirus RNA Synthesis in Infected Cells
Uchil P, Kumar A, Satchidanandam V. Nuclear Localization of Flavivirus RNA Synthesis in Infected Cells. Journal Of Virology 2006, 80: 5451-5464. PMID: 16699025, PMCID: PMC1472159, DOI: 10.1128/jvi.01982-05.Peer-Reviewed Original ResearchConceptsReplicase proteinsReplication complexMembrane-bound replication complexesRNA synthesisViral replicase proteinsRNA-dependent RNA polymerase activityViral replication complexFlavivirus RNA synthesisCell nucleus functionsRNA polymerase activityReplicase complexHost cytoplasmNuclear matrixNuclear localizationNuclear locationPeripheral laminaIsolated nucleiImmunoelectron microscopyPolymerase activityJapanese encephalitis virusFlavivirus RNAInfected cellsProteinAbsolute requirementViral RNA
2003
Characterization of RNA synthesis, replication mechanism, and in vitro RNA-dependent RNA polymerase activity of japanese encephalitis virus
Uchil P, Satchidanandam V. Characterization of RNA synthesis, replication mechanism, and in vitro RNA-dependent RNA polymerase activity of japanese encephalitis virus. Virology 2003, 307: 358-371. PMID: 12667804, DOI: 10.1016/s0042-6822(02)00130-7.Peer-Reviewed Original Research