1992
Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language
Shifman M, Windemuth A, Schulten K, Miller P. Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language. Journal Of Biomedical Informatics 1992, 25: 168-180. PMID: 1582193, DOI: 10.1016/0010-4809(92)90019-7.Peer-Reviewed Original ResearchConceptsMachine-independent parallel programming languageParallel programming languageProgramming languageShared memory parallel computerHigh performance Unix workstationsNetwork of workstationsParallel computing approachMemory parallel computersComputing approachNetworked workstationsUNIX workstationsParallel computersExpensive phaseEffective algorithmResearch communityPerformance benchmarksWorkstationsAlgorithmNetworkGlobal motionLanguageComputerLindaSimulationsBenchmarks
1991
A parallel computing approach to genetic sequence comparison: The master-worker paradigm with interworker communication
Sittig D, Foulser D, Carriero N, McCorkle G, Miller P. A parallel computing approach to genetic sequence comparison: The master-worker paradigm with interworker communication. Journal Of Biomedical Informatics 1991, 24: 152-169. PMID: 2036781, DOI: 10.1016/0010-4809(91)90027-t.Peer-Reviewed Original ResearchConceptsTuple spaceGenetic sequence comparisonC-LindaMachine-independent parallel programming languageComparison algorithmsSimilarity scoresParallel programming languageMaster-worker paradigmTest sequencesParallel computing approachTotal search timeSequence comparison algorithmComputing approachParallel programsProgramming languageParallel computersWorker processesParallel implementationSequent SymmetryMaster processSequential versionIntel HypercubeParallel versionString comparisonSearch timeMolecular dynamics simulation on a network of workstations using a machine-independent parallel programming language.
Shifman M, Windemuth A, Schulten K, Miller P. Molecular dynamics simulation on a network of workstations using a machine-independent parallel programming language. AMIA Annual Symposium Proceedings 1991, 414-8. PMID: 1807634, PMCID: PMC2247565.Peer-Reviewed Original ResearchConceptsMachine-independent parallel programming languageParallel programming languageProgramming languageShared memory parallel computerHigh performance Unix workstationsNetwork of workstationsParallel computing approachMemory parallel computersComputing approachNetworked workstationsUNIX workstationsParallel computersExpensive phaseEffective algorithmResearch communityPerformance benchmarksWorkstationsAlgorithmNetworkGlobal motionLanguageComputerLindaSimulationsBenchmarks