2015
Comparing Mycobacterium tuberculosis genomes using genome topology networks
Jiang J, Gu J, Zhang L, Zhang C, Deng X, Dou T, Zhao G, Zhou Y. Comparing Mycobacterium tuberculosis genomes using genome topology networks. BMC Genomics 2015, 16: 85. PMID: 25766780, PMCID: PMC4342819, DOI: 10.1186/s12864-015-1259-0.Peer-Reviewed Original ResearchMeSH KeywordsComputational BiologyEvolution, MolecularGenome, BacterialHumansMycobacterium tuberculosisPhylogenyTuberculosisConceptsGenomic structural variationWhole genome-based phylogenetic analysisGenome-based phylogenetic analysisPhylogenetic analysisM. tuberculosis genomeGene gain/lossTuberculosis genomeComplete gene annotationStructural variationsComparative genomic analysisGene family membersInvestigation of genesRelated bacterial strainsBacterial strainsResistance-related genesGenome topologyGene duplicationGene annotationGenome rearrangementsClosest speciesPhylogenetic studiesPhylogenetic treeGene locationGene homologyGenomic analysis
2014
Multiclass classification of sarcomas using pathway based feature selection method
Gu J, Lu Y, Liu C, Lu H. Multiclass classification of sarcomas using pathway based feature selection method. Journal Of Theoretical Biology 2014, 362: 3-8. PMID: 25014475, DOI: 10.1016/j.jtbi.2014.06.038.Peer-Reviewed Original Research
2009
Improving detection of differentially expressed gene sets by applying cluster enrichment analysis to Gene Ontology
Xu T, Gu J, Zhou Y, Du L. Improving detection of differentially expressed gene sets by applying cluster enrichment analysis to Gene Ontology. BMC Bioinformatics 2009, 10: 240. PMID: 19653916, PMCID: PMC2731756, DOI: 10.1186/1471-2105-10-240.Peer-Reviewed Original Research