2019
Comparative transcriptome analysis of hESC- and iPSC-derived lentoid bodies
Ali M, Kabir F, Thomson JJ, Ma Y, Qiu C, Delannoy M, Khan SY, Riazuddin SA. Comparative transcriptome analysis of hESC- and iPSC-derived lentoid bodies. Scientific Reports 2019, 9: 18552. PMID: 31811247, PMCID: PMC6898283, DOI: 10.1038/s41598-019-54258-z.Peer-Reviewed Original ResearchConceptsHuman embryonic stem cellsComparative transcriptome analysisTranscriptome analysisLentoid bodiesPluripotent stem cellsBody transcriptomeRNA sequencingStem cellsNext-generation RNA sequencingEmbryonic stem cellsFiber-like cellsSimilar expression profilesTranscriptome datasetsTranscriptome profilingCell transcriptomeLens morphogenesisExcellent systemMouse lensExpression profilesTranscriptomeMechanism of cataractogenesisLens-like structuresUltrastructure analysisGenesOcular lens
2018
Generation and Proteome Profiling of PBMC-Originated, iPSC-Derived Corneal Endothelial Cells
Ali M, Khan SY, Vasanth S, Ahmed MR, Chen R, Na CH, Thomson JJ, Qiu C, Gottsch JD, Riazuddin SA. Generation and Proteome Profiling of PBMC-Originated, iPSC-Derived Corneal Endothelial Cells. Investigative Ophthalmology & Visual Science 2018, 59: 2437-2444. PMID: 29847650, PMCID: PMC5957521, DOI: 10.1167/iovs.17-22927.Peer-Reviewed Original ResearchMeSH KeywordsAgedCell DifferentiationCells, CulturedCryopreservationEmbryonic Stem CellsEndothelium, CornealFlow CytometryGene Expression ProfilingGenetic MarkersHumansImmunohistochemistryInduced Pluripotent Stem CellsLeukocytes, MononuclearMaleMass SpectrometryMicroscopy, Phase-ContrastMiddle AgedNeural CrestProteomeReal-Time Polymerase Chain ReactionConceptsNeural crest cellsProteome sequencingProteome profilingCorneal endothelial cellsExpression of pluripotentQuantitative real-time PCRPluripotent stem cellsMolecular architectureCrest cellsEndothelial cellsProteomeReal-time PCRPluripotency markersHuman corneal endotheliumStem cellsPhase contrast microscopyExpression levelsProteinIPSCsSequencingCellsProfilingFirst reportContrast microscopyHigh levels
2017
Effects of the Janus Kinase Inhibitor, Tofacitinib, on Testicular Leydig Cell Hyperplasia and Adenoma in Rats, and on Prolactin Signaling in Cultured Primary Rat Leydig Cells
Chapin RE, Ball DJ, Radi ZA, Kumpf SW, Koza-Taylor PH, Potter DM, Mark Vogel W. Toxicol Sci. 2017 Jan;155(1):148-156. (Acknowledged for contribution)Peer-Reviewed Original Research
2015
Dimethadione embryotoxicity in the rat is neither correlated with maternal systemic drug concentrations nor embryonic tissue levels
Ozolinš TR, Weston AD, Perretta A, Thomson JJ, Brown NA. Dimethadione embryotoxicity in the rat is neither correlated with maternal systemic drug concentrations nor embryonic tissue levels. Toxicology And Applied Pharmacology 2015, 289: 89-97. PMID: 26375719, DOI: 10.1016/j.taap.2015.09.005.Peer-Reviewed Original ResearchConceptsGD 11Tissue concentrationsSystemic concentrationsWhole embryo cultureTissue levelsMaternal serum levelsIncidence of CHDSystemic drug concentrationsGestational day 8Embryonic concentrationsCHD incidenceMaternal serumSerum levelsPregnant ratsSeparate cohortAnticonvulsant trimethadioneDay 8Embryonic outcomeCongenital heartDrug concentrationsDimethadioneDMO concentrationIncidenceDevelopmental outcomesRats
2014
Tissue‐Engineered Vascular Grafts Created From Human Induced Pluripotent Stem Cells
Sundaram S, One J, Siewert J, Teodosescu S, Zhao L, Dimitrievska S, Qian H, Huang AH, Niklason L. Tissue‐Engineered Vascular Grafts Created From Human Induced Pluripotent Stem Cells. Stem Cells Translational Medicine 2014, 3: 1535-1543. PMID: 25378654, PMCID: PMC4250208, DOI: 10.5966/sctm.2014-0065.Peer-Reviewed Original ResearchConceptsPluripotent stem cellsMesenchymal lineagesSmooth muscle cell differentiationMuscle cell differentiationStem cellsInduced pluripotent stem cellsNeural crest intermediateHuman induced pluripotent stem cellsMesenchymal progenitor cellsStem cell clonesCollagen-rich matrixCell differentiationVascular developmentHiPSC linesProgenitor cellsSmooth muscle cellsCell apoptosisHiPS cellsLineagesMesenchymal markersGeneration of graftMuscle cellsClonesTissue-engineered vascular graftsCells
2011
Noninvasive High‐Resolution Ultrasound Reveals Structural and Functional Deficits in Dimethadione‐Exposed Fetal Rat Hearts In Utero
Purssell E, Weston AD, Thomson JJ, Swanson TA, Brown NA, Ozolinš TR. Noninvasive High‐Resolution Ultrasound Reveals Structural and Functional Deficits in Dimethadione‐Exposed Fetal Rat Hearts In Utero. Birth Defects Research Part B Developmental And Reproductive Toxicology 2011, 95: 35-46. PMID: 22127902, DOI: 10.1002/bdrb.20339.Peer-Reviewed Original ResearchNot a walk in the park: the ECVAM whole embryo culture model challenged with pharmaceuticals and attempted improvements with random forest design
Thomson J, Johnson K, Chapin R, Stedman D, Kumpf S, Ozolinš TR. Not a walk in the park: the ECVAM whole embryo culture model challenged with pharmaceuticals and attempted improvements with random forest design. Birth Defects Research Part B Developmental And Reproductive Toxicology 2011, 92: 111-121. PMID: 21370399, DOI: 10.1002/bdrb.20289.Peer-Reviewed Original Research
2008
Assessment of the Embryonic Stem Cell Test and application and use in the pharmaceutical industry
Paquette JA, Kumpf SW, Streck RD, Thomson JJ, Chapin RE, Stedman DB. Assessment of the Embryonic Stem Cell Test and application and use in the pharmaceutical industry. Birth Defects Research Part B Developmental And Reproductive Toxicology 2008, 83: 104-111. PMID: 18361453, DOI: 10.1002/bdrb.20148.Peer-Reviewed Original Research