2025
Best Practices in the Development and Use of Experimental Models of Bacterial Pneumonia: An Official American Thoracic Society Workshop Report
Samarasinghe A, Randell S, Kulkarni H, Weiser J, Quinton L, Dickson R, Mizgerd J, Orihuela C, Parker D, Robinson K, Prince A, Evans S, Kolls J, Lee J, Jeyaseelan S, Torres A, Miller L, Hamilton D, Gómez M, Moore B, Walker R, Barkal L, Hook J, Lau G, Sharma J, Witzenrath M, Dela Cruz C. Best Practices in the Development and Use of Experimental Models of Bacterial Pneumonia: An Official American Thoracic Society Workshop Report. American Journal Of Respiratory Cell And Molecular Biology 2025, 73: 178-199. PMID: 40748059, PMCID: PMC12334885, DOI: 10.1165/rcmb.2025-0322st.Peer-Reviewed Original ResearchConceptsAnimal models of bacterial pneumoniaBacterial pneumoniaAnimal modelsAcute lower respiratory tract infectionLower respiratory tract infectionsGlobal incidenceHospital-acquired pneumoniaRespiratory tract infectionsBacterial lung infectionsExperimental modelAmerican Thoracic Society workshopTract infectionsSignificant morbidityPreclinical modelsLung infectionRespiratory infectious diseasesModel infectionPneumoniaIncidence of respiratory infectious diseasesStages of infectionBacterial diseasesInfectionPneumonia typeNon-animal modelsDisease
2023
Global incidence and prevalence of autoimmune hepatitis, 1970–2022: a systematic review and meta-analysis
Hahn J, Yang H, Moon J, Chang J, Lee K, Kim G, Rahmati M, Koyanagi A, Smith L, Kim M, Sánchez G, Elena D, Shin J, Shin J, Kwon R, Kim S, Kim H, Lee H, Ko J, Yon D. Global incidence and prevalence of autoimmune hepatitis, 1970–2022: a systematic review and meta-analysis. EClinicalMedicine 2023, 65: 102280. PMID: 37876996, PMCID: PMC10590724, DOI: 10.1016/j.eclinm.2023.102280.Peer-Reviewed Original ResearchPrevalence of autoimmune hepatitisAIH incidenceEvidence of publication biasAutoimmune hepatitisRandom-effects modelIncidence of autoimmune hepatitisConvenience sampleDatabase inceptionFunnel plotPublication biasSystematic reviewPooled estimatesCochrane DatabaseStudy protocolNational trendsMeta-analysisGoogle ScholarInhabitant-yearsSubgroup analysisPrevalenceHuman Development IndexEffects modelGlobal incidenceOverall incidenceNational Research FoundationGlobal, regional, and national estimates of tuberculosis incidence and case detection among incarcerated individuals from 2000 to 2019: a systematic analysis
Martinez L, Warren J, Harries A, Croda J, Espinal M, Olarte R, Avedillo P, Lienhardt C, Bhatia V, Liu Q, Chakaya J, Denholm J, Lin Y, Kawatsu L, Zhu L, Horsburgh C, Cohen T, Andrews J. Global, regional, and national estimates of tuberculosis incidence and case detection among incarcerated individuals from 2000 to 2019: a systematic analysis. The Lancet Public Health 2023, 8: e511-e519. PMID: 37393090, PMCID: PMC10323309, DOI: 10.1016/s2468-2667(23)00097-x.Peer-Reviewed Original ResearchConceptsTuberculosis incidenceCase detection ratioIncidence rateCase detectionHigh tuberculosis incidence ratesGlobal tuberculosis control effortsIncident tuberculosis casesTuberculosis incidence rateIncarcerated individualsTuberculosis control effortsTuberculosis case detectionTuberculosis casesNotification ratesNational incidenceTuberculosis notificationsGlobal incidenceHigh riskPrevalence estimatesNational estimatesWHO regionsIncidenceStudy periodMeta-regression frameworkTuberculosisNational InstituteGlobal Incidence and Prevalence of Eosinophilic Esophagitis, 1976–2022: A Systematic Review and Meta-analysis
Hahn J, Lee K, Shin J, Cho S, Turner S, Shin J, Yeniova A, Koyanagi A, Jacob L, Smith L, Fond G, Boyer L, Lee S, Kwon R, Kim S, Shin Y, Rhee S, Moon J, Ko J, Yon D, Papadopoulos N. Global Incidence and Prevalence of Eosinophilic Esophagitis, 1976–2022: A Systematic Review and Meta-analysis. Clinical Gastroenterology And Hepatology 2023, 21: 3270-3284.e77. PMID: 37331411, DOI: 10.1016/j.cgh.2023.06.005.Peer-Reviewed Original ResearchConceptsPrevalence of EoEPooled incidenceEosinophilic esophagitisGlobal incidencePrevalence of eosinophilic esophagitisDiagnostic criteriaInhabitant-yearsIncidence of EoEConfidence intervalsSystematic reviewWorld Bank income groupsHigh-income countriesSubgroup analysisEoEPooled prevalenceCochrane DatabasePooled estimatesGlobal prevalenceEligibility criteriaMeta-analysisInception datesPrevalenceGeneral populationEsophagealIncidence
2021
Global estimates of paediatric tuberculosis incidence in 2013–19: a mathematical modelling analysis
Yerramsetti S, Cohen T, Atun R, Menzies NA. Global estimates of paediatric tuberculosis incidence in 2013–19: a mathematical modelling analysis. The Lancet Global Health 2021, 10: e207-e215. PMID: 34895517, PMCID: PMC8800006, DOI: 10.1016/s2214-109x(21)00462-9.Peer-Reviewed Original ResearchConceptsPediatric tuberculosisTuberculosis incidenceStudy periodIncident tuberculosis casesTuberculosis incidence rateReporting systemHigh-burden settingsGlobal tuberculosis burdenTuberculosis natural historyPediatric incidenceInfectious exposurePrompt diagnosisSubstantial morbidityTuberculosis burdenTuberculosis casesIncidence rateRisk factorsCase detectionGlobal incidenceProbability of infectionInfected individualsAge groupsNatural historyTuberculosisIncidenceGlobal, regional, and national sex-specific burden and control of the HIV epidemic, 1990–2019, for 204 countries and territories: the Global Burden of Diseases Study 2019
Collaborators G, Jahagirdar D, Walters M, Novotney A, Brewer E, Frank T, Carter A, Biehl M, Abbastabar H, Abhilash E, Abu-Gharbieh E, Abu-Raddad L, Adekanmbi V, Adeyinka D, Adnani Q, Afzal S, Aghababaei S, Ahinkorah B, Ahmad S, Ahmadi K, Ahmadi S, Ahmadpour E, Ahmed M, Rashid T, Salih Y, Aklilu A, Akram T, Akunna C, Al Hamad H, Alahdab F, Alanezi F, Aleksandrova E, Alene K, Ali L, Alipour V, Almustanyir S, Alvis-Guzman N, Ameyaw E, Amu H, Andrei C, Andrei T, Anvari D, Arabloo J, Aremu O, Arulappan J, Atnafu D, Quintanilla B, Ayza M, Azari S, Darshan B, Banach M, Bärnighausen T, Barra F, Barrow A, Basu S, Bazargan-Hejazi S, Belay H, Berheto T, Bezabhe W, Bezabih Y, Bhagavathula A, Bhardwaj N, Bhardwaj P, Bhattacharyya K, Bibi S, Bijani A, Bisignano C, Bolarinwa O, Boloor A, Boltaev A, Briko N, Buonsenso D, Burkart K, Butt Z, Cao C, Charan J, Chatterjee S, Chattu S, Chattu V, Choudhari S, Chu D, Couto R, Cowden R, Dachew B, Dadras O, Dagnew A, Dahlawi S, Dai X, Dandona L, Dandona R, Neves J, Degenhardt L, Demeke F, Desta A, Deuba K, Dhamnetiya D, Dhungana G, Dianatinasab M, Diaz D, Djalalinia S, Doan L, Dorostkar F, Edinur H, Effiong A, Eftekharzadeh S, Zaki M, Elayedath R, Elhadi M, El-Jaafary S, El-Khatib Z, Elsharkawy A, Endalamaw A, Endries A, Eskandarieh S, Ezeonwumelu I, Ezzikouri S, Farahmand M, Faraon E, Fasanmi A, Ferrero S, Desideri L, Filip I, Fischer F, Folayan M, Foroutan M, Fukumoto T, Gad M, Gadanya M, Gaidhane A, Garg T, Gayesa R, Gebreyohannes E, Gesesew H, Obsa A, Ghadiri K, Ghashghaee A, Gilani S, Ginindza T, Glavan I, Glushkova E, Golechha M, Gugnani H, Gupta B, Gupta S, Gupta V, Gupta V, Hamidi S, Handanagic S, Haque S, Harapan H, Hargono A, Hasaballah A, Hashi A, Hassan S, Hassanipour S, Hayat K, Heredia-Pi I, Hezam K, Holla R, Hoogar P, Hoque M, Hosseini M, Hosseinzadeh M, Hsairi M, Hussain R, Ibitoye S, Idrisov B, Ikuta K, Ilesanmi O, Ilic I, Ilic M, Irvani S, Islam M, Ismail N, Itumalla R, Iyamu I, Jabbarinejad R, Jain V, Jayawardena R, Jha R, Joseph N, Kabir A, Kabir Z, Kalhor R, Kaliyadan F, Kamath A, Kanchan T, Kandel H, Kassahun G, Katoto P, Kayode G, Kebede E, Kebede H, Khajuria H, Khalid N, Khan E, Khan G, Khatab K, Kim M, Kim Y, Kisa A, Kisa S, Kochhar S, Korshunov V, Koul P, Laxminarayana S, Koyanagi A, Krishan K, Defo B, Kumar G, Kumar M, Kumar N, Kwarteng A, Lal D, Landires I, Lasrado S, Lassi Z, Lazarus J, Lee J, Lee Y, LeGrand K, Lin C, Liu X, Maddison E, Razek H, Mahasha P, Majeed A, Makki A, Malik A, Manamo W, Mansournia M, Martins-Melo F, Masoumi S, Memish Z, Menezes R, Mengesha E, Merie H, Mersha A, Mestrovic T, Meylakhs P, Mheidly N, Miller T, Mirica A, Moazen B, Mohammad Y, Mohammadi M, Mohammed A, Mohammed S, Mohammed S, Moitra M, Mokdad A, Molokhia M, Moni M, Moradi G, Moradi Y, Mpundu-Kaambwa C, Mubarik S, Munro S, Mwanri L, Nachega J, Nagarajan A, Narayana A, Naveed M, Nayak B, Nduaguba S, Kandel S, Nguefack-Tsague G, Nguyen T, Nixon M, Nnaji C, Noubiap J, Nuñez-Samudio V, Nyirenda T, Oghenetega O, Olagunju A, Olakunde B, Owopetu O, Mahesh P, Padubidri J, Pakhale S, Parekh T, Kan F, Pawar S, Pepito V, Peprah E, Pinheiro M, Pokhrel K, Polibin R, Pollok R, Postma M, Syed Z, Radfar A, Radhakrishnan R, Rahim F, Rahimi-Movaghar V, Rahimzadeh S, Rahman M, Rahmani A, Ram P, Ranabhat C, Ranasinghe P, Rao C, Rao S, Rathi P, Rawaf D, Rawaf S, Regassa L, Rehman I, Renzaho A, Rezaei N, Rezahosseini O, Rezai M, Rezapour A, Ripon R, Rodrigues V, Roshchin D, Rwegerera G, Saeed U, Moghaddam S, Sagar R, Saif-Ur-Rahman K, Salem M, Samaei M, Samy A, Santric-Milicevic M, Saroshe S, Sathian B, Satpathy M, Sawhney M, Schutte A, Seylani A, Shaikh M, Shaka M, Shamshad H, Shamsizadeh M, Shannawaz M, Shetty A, Shin J, Shivakumar K, Singh J, Skryabin V, Skryabina A, Somayaji R, Soshnikov S, Spurlock E, Stein D, Sufiyan M, Tadbiri H, Tadesse B, Tadesse E, Tamiru A, Tarkang E, Taveira N, Tekalegn Y, Tesfay F, Tessema G, Thapar R, Tovani-Palone M, Traini E, Tran B, Tsai A, Tusa B, Ullah S, Umeokonkwo C, Unnikrishnan B, Tahbaz S, Villafañe J, Vladimirov S, Vo B, Vongpradith A, Vu G, Waheed Y, Wamai R, Wang G, Wang Y, Ward P, Westerman R, Winkler A, Yadav L, Jabbari S, Yazie T, Yi S, Yigit V, Yirdaw B, Yonemoto N, Yu C, Yunusa I, Zastrozhin M, Zastrozhina A, Zhang Z, Zumla A, Salomon J, Eaton J, Naghavi M, Dwyer-Lindgren L, Wang H, Lim S, Hay S, Murray C, Kyu H. Global, regional, and national sex-specific burden and control of the HIV epidemic, 1990–2019, for 204 countries and territories: the Global Burden of Diseases Study 2019. The Lancet HIV 2021, 8: e633-e651. PMID: 34592142, PMCID: PMC8491452, DOI: 10.1016/s2352-3018(21)00152-1.Peer-Reviewed Original ResearchConceptsIncident casesHIV epidemicHIV burdenGlobal incidenceNational InstituteDisease Study 2019High HIV burdenHIV seroprevalence surveysSentinel surveillance dataPublic health threatHIV/AIDSSex-specific trendsMale infectionPrevalence ratiosUS National InstitutesFemale infectionMortality ratioGlobal burdenVital registration systemsHIVPediatric modelDeath dataFemale deathsMale deathsSurveillance data
2019
Selective Recruitment of Lethal Pro-inflammatory Macrophages in Sepsis by MIF but not D-DT (MIF-2)
Tilstam P, Schulte W, Holowka T, Kim B, Piecychna M, Pantouris G, Lolis E, Leng L, Bernhagen J, Bucala R. Selective Recruitment of Lethal Pro-inflammatory Macrophages in Sepsis by MIF but not D-DT (MIF-2). The Journal Of Immunology 2019, 202: 51.9-51.9. DOI: 10.4049/jimmunol.202.supp.51.9.Peer-Reviewed Original ResearchMacrophage migration inhibitory factorSmall peritoneal macrophagesLarge peritoneal macrophagesPolymicrobial sepsisPeritoneal macrophagesMIF receptor CD74MIF promoter polymorphismsMigration inhibitory factorPro-inflammatory macrophagesSelective roleDate interventionsMIF deficiencyAdoptive transferSurvival benefitInfectious insultsMIF antibodyInflammatory cytokinesPeritoneal inflammationReceptor CD74Inflammatory pathwaysLeading causeSepsis lethalityInflammatory responseAbstract SepsisGlobal incidence
2014
Incidence of multidrug-resistant tuberculosis disease in children: systematic review and global estimates
Jenkins HE, Tolman AW, Yuen CM, Parr JB, Keshavjee S, Pérez-Vélez CM, Pagano M, Becerra MC, Cohen T. Incidence of multidrug-resistant tuberculosis disease in children: systematic review and global estimates. The Lancet 2014, 383: 1572-1579. PMID: 24671080, PMCID: PMC4094366, DOI: 10.1016/s0140-6736(14)60195-1.Peer-Reviewed Original ResearchConceptsMultidrug-resistant tuberculosisMultidrug-resistant tuberculosis diseaseTreatment-naive adultsMultidrug-resistant diseaseTuberculosis diseaseTuberculosis incidenceGlobal incidenceSystematic reviewCases of tuberculosisHarvard Medical SchoolGlobal tuberculosis incidenceGlobal annual incidenceTuberculosis riskAnnual incidencePatient groupUS National InstitutesWomen's HospitalInclusion criteriaInternal medicineNew diagnostic instrumentDisease riskTuberculosisIncidenceDiseaseHealth equity
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