Publications

Featured Publications

Interventions to mitigate EHR and documentation burden in health professions trainees: A scoping reviewLevy D, Rossetti S, Brandt C, Melnick E, Hamilton A, Rinne S, Womack D, Mohan V. Interventions to mitigate EHR and documentation burden in health professions trainees: A scoping review. Applied Clinical Informatics 2024 PMID: 39366661, DOI: 10.1055/a-2434-5177.
Ascle—A Python Natural Language Processing Toolkit for Medical Text Generation: Development and Evaluation StudyYang R, Zeng Q, You K, Qiao Y, Huang L, Hsieh C, Rosand B, Goldwasser J, Dave A, Keenan T, Ke Y, Hong C, Liu N, Chew E, Radev D, Lu Z, Xu H, Chen Q, Li I. Ascle—A Python Natural Language Processing Toolkit for Medical Text Generation: Development and Evaluation Study. Journal Of Medical Internet Research 2024, 26: e60601. PMID: 39361955, PMCID: PMC11487205, DOI: 10.2196/60601.
Augmenting biomedical named entity recognition with general-domain resourcesYin Y, Kim H, Xiao X, Wei C, Kang J, Lu Z, Xu H, Fang M, Chen Q. Augmenting biomedical named entity recognition with general-domain resources. Journal Of Biomedical Informatics 2024, 159: 104731. PMID: 39368529, DOI: 10.1016/j.jbi.2024.104731.
Toward a responsible future: recommendations for AI-enabled clinical decision supportLabkoff S, Oladimeji B, Kannry J, Solomonides A, Leftwich R, Koski E, Joseph A, Lopez-Gonzalez M, Fleisher L, Nolen K, Dutta S, Levy D, Price A, Barr P, Hron J, Lin B, Srivastava G, Pastor N, Luque U, Bui T, Singh R, Williams T, Weiner M, Naumann T, Sittig D, Jackson G, Quintana Y. Toward a responsible future: recommendations for AI-enabled clinical decision support. Journal Of The American Medical Informatics Association 2024, 31: 2730-2739. PMID: 39325508, PMCID: PMC11491642, DOI: 10.1093/jamia/ocae209.
Detection of Gastrointestinal Bleeding with Large Language Models to Aid Quality Improvement and Appropriate ReimbursementZheng N, Keloth V, You K, Kats D, Li D, Deshpande O, Sachar H, Xu H, Laine L, Shung D. Detection of Gastrointestinal Bleeding with Large Language Models to Aid Quality Improvement and Appropriate Reimbursement. Gastroenterology 2024 PMID: 39304088, DOI: 10.1053/j.gastro.2024.09.014.
Relation extraction using large language models: a case study on acupuncture point locationsLi Y, Peng X, Li J, Zuo X, Peng S, Pei D, Tao C, Xu H, Hong N. Relation extraction using large language models: a case study on acupuncture point locations. Journal Of The American Medical Informatics Association 2024, 31: 2622-2631. PMID: 39208311, PMCID: PMC11491641, DOI: 10.1093/jamia/ocae233.
Web-based objective and structured assessment of point-of-care lung ultrasound skills in resource-limited settingsSuttels V, Chichignoud I, Wachinou P, Du Toit J, Mans P, Blanco J, Agodokpessi G, Brahier T, Hartley M, Garcia E, Boillat-Blanco N. Web-based objective and structured assessment of point-of-care lung ultrasound skills in resource-limited settings. BMC Medical Education 2024, 24: 939. PMID: 39198828, PMCID: PMC11360711, DOI: 10.1186/s12909-024-05925-x.
Privacy-Enhancing Technologies in Biomedical Data ScienceCho H, Froelicher D, Dokmai N, Nandi A, Sadhuka S, Hong M, Berger B. Privacy-Enhancing Technologies in Biomedical Data Science. Annual Review Of Biomedical Data Science 2024, 7: 317-343. PMID: 39178425, PMCID: PMC11346580, DOI: 10.1146/annurev-biodatasci-120423-120107.
Automated Interpretation of Lung Sounds by Deep Learning in Children With Asthma: Scoping Review and Strengths, Weaknesses, Opportunities, and Threats AnalysisRuchonnet-Métrailler I, Siebert J, Hartley M, Lacroix L. Automated Interpretation of Lung Sounds by Deep Learning in Children With Asthma: Scoping Review and Strengths, Weaknesses, Opportunities, and Threats Analysis. Journal Of Medical Internet Research 2024, 26: e53662. PMID: 39178033, PMCID: PMC11380063, DOI: 10.2196/53662.
Defining Documentation Burden (DocBurden) and Excessive DocBurden for All Health Professionals: A Scoping ReviewLevy D, Withall J, Mishuris R, Tiase V, Diamond C, Douthit B, Grabowska M, Lee R, Moy A, Sengstack P, Adler-Milstein J, Detmer D, Johnson K, Cimino J, Corley S, Murphy J, Rosenbloom S, Cato K, Rossetti S. Defining Documentation Burden (DocBurden) and Excessive DocBurden for All Health Professionals: A Scoping Review. Applied Clinical Informatics 2024, 15: 898-913. PMID: 39137903, PMCID: PMC11524753, DOI: 10.1055/a-2385-1654.
Balancing the efforts of chart review and gains in PRS prediction accuracy: An empirical studyLei Y, Christian Naj A, Xu H, Li R, Chen Y. Balancing the efforts of chart review and gains in PRS prediction accuracy: An empirical study. Journal Of Biomedical Informatics 2024, 157: 104705. PMID: 39134233, DOI: 10.1016/j.jbi.2024.104705.
Secure discovery of genetic relatives across large-scale and distributed genomic datasetsHong M, Froelicher D, Magner R, Popic V, Berger B, Cho H. Secure discovery of genetic relatives across large-scale and distributed genomic datasets. Genome Research 2024, 34: gr.279057.124. PMID: 39111815, PMCID: PMC11529841, DOI: 10.1101/gr.279057.124.
Outpatient reception via collaboration between nurses and a large language model: a randomized controlled trialWan P, Huang Z, Tang W, Nie Y, Pei D, Deng S, Chen J, Zhou Y, Duan H, Chen Q, Long E. Outpatient reception via collaboration between nurses and a large language model: a randomized controlled trial. Nature Medicine 2024, 30: 2878-2885. PMID: 39009780, DOI: 10.1038/s41591-024-03148-7.
Leveraging error-prone algorithm-derived phenotypes: Enhancing association studies for risk factors in EHR dataLu Y, Tong J, Chubak J, Lumley T, Hubbard R, Xu H, Chen Y. Leveraging error-prone algorithm-derived phenotypes: Enhancing association studies for risk factors in EHR data. Journal Of Biomedical Informatics 2024, 157: 104690. PMID: 39004110, DOI: 10.1016/j.jbi.2024.104690.
Develop and validate a computable phenotype for the identification of Alzheimer's disease patients using electronic health record dataHe X, Wei R, Huang Y, Chen Z, Lyu T, Bost S, Tong J, Li L, Zhou Y, Li Z, Guo J, Tang H, Wang F, DeKosky S, Xu H, Chen Y, Zhang R, Xu J, Guo Y, Wu Y, Bian J. Develop and validate a computable phenotype for the identification of Alzheimer's disease patients using electronic health record data. Alzheimer's & Dementia Diagnosis Assessment & Disease Monitoring 2024, 16: e12613. PMID: 38966622, PMCID: PMC11220631, DOI: 10.1002/dad2.12613.
Electronic Health Record Concordance with Survey-Reported Military Sexual Trauma Among Younger Veterans: Associations with Health Care Utilization and Mental Health DiagnosesGaffey A, Burg M, Skanderson M, Deviva J, Brandt C, Bastian L, Haskell S. Electronic Health Record Concordance with Survey-Reported Military Sexual Trauma Among Younger Veterans: Associations with Health Care Utilization and Mental Health Diagnoses. Journal Of Women's Health 2024 PMID: 38946553, DOI: 10.1089/jwh.2023.0993.

2024

Psychedelic Art and Implications for Mental Health: Randomized Pilot Study.Peng ML, Monin J, Ovchinnikova P, Levi A, McCall T. Psychedelic Art and Implications for Mental Health: Randomized Pilot Study. JMIR Form Res 2024, 8: e66430. PMID: 39626224, DOI: 10.2196/66430.
Pelvic Floor Physical Therapy Prehabilitation (PrePFPT) for the prevention of low anterior resection syndromeCoppersmith N, Schultz K, Esposito A, Reinhart K, Ray E, Leeds I, Pantel H, Reddy V, Longo W, Mongiu A. Pelvic Floor Physical Therapy Prehabilitation (PrePFPT) for the prevention of low anterior resection syndrome. Surgical Oncology Insight 2024, 1: 100097. DOI: 10.1016/j.soi.2024.100097.
Improved surface morphology and reduced V-pits density of lattice-matched AlInN films grown by atmospheric pressure metalorganic chemical vapor depositionFan S, Ikeda M, Zhang B, Li Z, Su X, Liu Z, Xu K. Improved surface morphology and reduced V-pits density of lattice-matched AlInN films grown by atmospheric pressure metalorganic chemical vapor deposition. Journal Of Alloys And Compounds 2024, 1007: 176406. DOI: 10.1016/j.jallcom.2024.176406.
Postacute Sequelae of COVID-19 in Pediatric Patients Within the United States: A Scoping ReviewMiller C, Borre C, Green A, Funaro M, Oliveira C, Iwasaki A. Postacute Sequelae of COVID-19 in Pediatric Patients Within the United States: A Scoping Review. American Journal Of Medicine Open 2024, 12: 100078. DOI: 10.1016/j.ajmo.2024.100078.
Lessons learned from the IMMREP23 TCR-epitope prediction challengeNielsen M, Eugster A, Jensen M, Goel M, Tiffeau-Mayer A, Pelissier A, Valkiers S, Martínez M, Meynard-Piganeeau B, Greiff V, Mora T, Walczak A, Croce G, Moreno D, Gfeller D, Meysman P, Barton J. Lessons learned from the IMMREP23 TCR-epitope prediction challenge. ImmunoInformatics 2024, 16: 100045. DOI: 10.1016/j.immuno.2024.100045.
Optical characterization of GaN:Eu microcrystals grown by the ammonothermal methodXie K, Li T, Ren G, Wang L, Lu W, Shen L, Zhou H, Xu K. Optical characterization of GaN:Eu microcrystals grown by the ammonothermal method. Journal Of Alloys And Compounds 2024, 1008: 176776. DOI: 10.1016/j.jallcom.2024.176776.
Evaluating the Safety of Empiric Tamsulosin to Prevent Postoperative Urinary Retention in a Colorectal Surgery Recovery PathwaySchultz K, Butensky S, Hickey T, Ahuja V, Perkal M, Murthy S, Cavallo J, Leeds I. Evaluating the Safety of Empiric Tamsulosin to Prevent Postoperative Urinary Retention in a Colorectal Surgery Recovery Pathway. Annals Of Surgery Open 2024, 5: e511. DOI: 10.1097/as9.0000000000000511.
Identifying and optimizing psychosocial frailty in surgical practiceSchultz K, Richburg C, Park E, Leeds I. Identifying and optimizing psychosocial frailty in surgical practice. Seminars In Colon And Rectal Surgery 2024, 35: 101061. DOI: 10.1016/j.scrs.2024.101061.
A proteome-wide quantitative platform for nanoscale spatially resolved extraction of membrane proteins into native nanodiscs.Brown C, Ghosh S, McAllister R, Kumar M, Walker G, Sun E, Aman T, Panda A, Kumar S, Li W, Coleman J, Liu Y, Rothman JE, Bhattacharyya M, Gupta K. A proteome-wide quantitative platform for nanoscale spatially resolved extraction of membrane proteins into native nanodiscs. Nat Methods 2024 PMID: 39609567, DOI: 10.1038/s41592-024-02517-x.
GABA(A) receptor π forms channels that stimulate ERK through a G-protein-dependent pathway.Wang Y, Zhang Y, Li W, Salovska B, Zhang J, Li T, Li H, Liu Y, Kaczmarek LK, Pusztai L, Klein DE. GABA(A) receptor π forms channels that stimulate ERK through a G-protein-dependent pathway. Mol Cell 2024 PMID: 39642883, DOI: 10.1016/j.molcel.2024.11.016.
Alcohol use and cannabis craving in daily life: Sex differences and associations among young adultsDavis C, Ramer N, Squeglia L, Gex K, McRae‐Clark A, McKee S, Roberts W, Gray K, Baker N, Tomko R. Alcohol use and cannabis craving in daily life: Sex differences and associations among young adults. Alcohol Clinical And Experimental Research 2024 PMID: 39579151, DOI: 10.1111/acer.15461.
A proteogenomic analysis of cervical cancer reveals therapeutic and biological insights.Yu J, Gui X, Zou Y, Liu Q, Yang Z, An J, Guo X, Wang K, Guo J, Huang M, Zhou S, Zuo J, Chen Y, Deng L, Yuan G, Li N, Song Y, Jia J, Zeng J, Zhao Y, Liu X, Du X, Liu Y, Wang P, Zhang B, Ding L, Robles AI, Rodriguez H, Zhou H, Shao Z, Wu L, Gao D. A proteogenomic analysis of cervical cancer reveals therapeutic and biological insights. Nat Commun 2024, 15: 10114. PMID: 39578447, DOI: 10.1038/s41467-024-53830-0.
A Multicenter Evaluation of the Impact of Therapies on Deep Learning-based Electrocardiographic Hypertrophic Cardiomyopathy MarkersDhingra L, Sangha V, Aminorroaya A, Bryde R, Gaballa A, Ali A, Mehra N, Krumholz H, Sen S, Kramer C, Martinez M, Desai M, Oikonomou E, Khera R. A Multicenter Evaluation of the Impact of Therapies on Deep Learning-based Electrocardiographic Hypertrophic Cardiomyopathy Markers. The American Journal Of Cardiology 2024 PMID: 39581517, DOI: 10.1016/j.amjcard.2024.11.028.
Improved Prediction of Ligand–Protein Binding Affinities by Meta-modelingLee H, Emani P, Gerstein M. Improved Prediction of Ligand–Protein Binding Affinities by Meta-modeling. Journal Of Chemical Information And Modeling 2024 PMID: 39576762, DOI: 10.1021/acs.jcim.4c01116.
The cell-type underpinnings of the human functional cortical connectomeZhang X, Anderson K, Dong H, Chopra S, Dhamala E, Emani P, Gerstein M, Margulies D, Holmes A. The cell-type underpinnings of the human functional cortical connectome. Nature Neuroscience 2024, 1-11. PMID: 39572742, DOI: 10.1038/s41593-024-01812-2.
Gender Differences in Alcohol Use Disorder Trends from 2009-2019: An Intersectional AnalysisVerplaetse T, Carretta R, Struble C, Pittman B, Roberts W, Zakiniaeiz Y, Peltier M, McKee S. Gender Differences in Alcohol Use Disorder Trends from 2009-2019: An Intersectional Analysis. Alcohol 2024 PMID: 39579801, DOI: 10.1016/j.alcohol.2024.11.003.
Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity networkYu Y, Edelson M, Pham A, Pekar J, Johnson B, Post K, Kuo T. Distributed, immutable, and transparent biomedical limited data set request management on multi-capacity network. Journal Of The American Medical Informatics Association 2024, ocae288. PMID: 39569448, DOI: 10.1093/jamia/ocae288.
Reflections in Studying Impact of Functional Seizure Services on Health Care Utilization OutcomesAltalib H. Reflections in Studying Impact of Functional Seizure Services on Health Care Utilization Outcomes. Neurology Clinical Practice 2024, 15: e200402. PMID: 39600561, PMCID: PMC11588420, DOI: 10.1212/cpj.0000000000200402.
Chiropractic residencies and fellowships as continuing education: a review of chiropractic state boards policiesSchut S, Cole II M, Price M, Bucki F, McCann B, Corcoran K. Chiropractic residencies and fellowships as continuing education: a review of chiropractic state boards policies. BMC Medical Education 2024, 24: 1338. PMID: 39567933, PMCID: PMC11580690, DOI: 10.1186/s12909-024-06348-4.
GENCODE 2025: reference gene annotation for human and mouseMudge J, Carbonell-Sala S, Diekhans M, Martinez J, Hunt T, Jungreis I, Loveland J, Arnan C, Barnes I, Bennett R, Berry A, Bignell A, Cerdán-Vélez D, Cochran K, Cortés L, Davidson C, Donaldson S, Dursun C, Fatima R, Hardy M, Hebbar P, Hollis Z, James B, Jiang Y, Johnson R, Kaur G, Kay M, Mangan R, Maquedano M, Gómez L, Mathlouthi N, Merritt R, Ni P, Palumbo E, Perteghella T, Pozo F, Raj S, Sisu C, Steed E, Sumathipala D, Suner M, Uszczynska-Ratajczak B, Wass E, Yang Y, Zhang D, Finn R, Gerstein M, Guigó R, Hubbard T, Kellis M, Kundaje A, Paten B, Tress M, Birney E, Martin F, Frankish A. GENCODE 2025: reference gene annotation for human and mouse. Nucleic Acids Research 2024, gkae1078. PMID: 39565199, DOI: 10.1093/nar/gkae1078.
Enhancing Emergency Department Triage Equity With Artificial Intelligence: Outcomes From a Multisite ImplementationHinson J, Levin S, Steinhart B, Chmura C, Sangal R, Venkatesh A, Taylor R. Enhancing Emergency Department Triage Equity With Artificial Intelligence: Outcomes From a Multisite Implementation. Annals Of Emergency Medicine 2024 PMID: 39570253, DOI: 10.1016/j.annemergmed.2024.10.014.
Integrating genome-wide information and wearable device data to explore the link of anxiety and antidepressants with pulse rate variabilityFriligkou E, Koller D, Pathak G, Miller E, Lampert R, Stein M, Polimanti R. Integrating genome-wide information and wearable device data to explore the link of anxiety and antidepressants with pulse rate variability. Molecular Psychiatry 2024, 1-7. PMID: 39558002, DOI: 10.1038/s41380-024-02836-7.
Coding the issue: low anterior resection syndrome following rectal cancer treatmentFick C, Linhares S, Schultz K, Esposito A, Coppersmith N, Pantel H, Reddy V, Leeds I, Mongiu A. Coding the issue: low anterior resection syndrome following rectal cancer treatment. Frontiers In Surgery 2024, 11: 1503410. DOI: 10.3389/fsurg.2024.1503410.
Individual and System Level Factors Contributing to Guideline Non-Adherent Surgical Antibiotic Prophylaxis at a Tertiary Health Care System: A Qualitative Analysis.Bardia A, Melnick E, McCall T, Zhao X, Lin H, Fisher C, Burg M, Schonberger R. Individual and System Level Factors Contributing to Guideline Non-Adherent Surgical Antibiotic Prophylaxis at a Tertiary Health Care System: A Qualitative Analysis. Anesthesiology 2024 PMID: 39556527, DOI: 10.1097/aln.0000000000005302.
OncoSplicing 3.0: an updated database for identifying RBPs regulating alternative splicing events in cancersZhang Y, Liu K, Xu Z, Li B, Wu X, Fan R, Yao X, Wu H, Duan C, Gong Y, Chen K, Zeng J, Li L, Xu H. OncoSplicing 3.0: an updated database for identifying RBPs regulating alternative splicing events in cancers. Nucleic Acids Research 2024, gkae1098. PMID: 39558172, DOI: 10.1093/nar/gkae1098.
Impact of electronic health record updates and changes on the delivery and monitoring of interventions in embedded pragmatic clinical trialsMarsolo K, Cheville A, Melnick E, Jarvik J, Simon G, Sluka K, Crofford L, Staman K, Richesson R, Schlaeger J, Curtis L. Impact of electronic health record updates and changes on the delivery and monitoring of interventions in embedded pragmatic clinical trials. Contemporary Clinical Trials 2024, 148: 107744. PMID: 39561918, DOI: 10.1016/j.cct.2024.107744.
Prospective and External Validation of an Ensemble Learning Approach to Sensitively Detect Intravenous Fluid Contamination in Basic Metabolic PanelsSpies N, Militello L, Farnsworth C, El-Khoury J, Durant T, Zaydman M. Prospective and External Validation of an Ensemble Learning Approach to Sensitively Detect Intravenous Fluid Contamination in Basic Metabolic Panels. Clinical Chemistry 2024, hvae168. PMID: 39545815, DOI: 10.1093/clinchem/hvae168.
Marginal interaction test for detecting interactions between genetic marker sets and environment in genome-wide studiesShen L, Amei A, Liu B, Xu G, Liu Y, Oh E, Zhou X, Wang Z. Marginal interaction test for detecting interactions between genetic marker sets and environment in genome-wide studies. G3: Genes, Genomes, Genetics 2024, jkae263. PMID: 39538414, DOI: 10.1093/g3journal/jkae263.
Artificial Intelligence Applications for Electrocardiography to Define New Digital Biomarkers of Cardiovascular Risk.Sangha V, Khera R. Artificial Intelligence Applications for Electrocardiography to Define New Digital Biomarkers of Cardiovascular Risk. Circulation Cardiovascular Quality And Outcomes 2024, e011483. PMID: 39540286, DOI: 10.1161/circoutcomes.124.011483.
Abstract B053: NucAE: Autoencoder-based enhancement of nucleosome occupancy signals from low-coverage cfDNA sequencingBalázs Z, Radig J, Wolford N, Schürch M, Krauthammer M. Abstract B053: NucAE: Autoencoder-based enhancement of nucleosome occupancy signals from low-coverage cfDNA sequencing. Clinical Cancer Research 2024, 30: b053-b053. DOI: 10.1158/1557-3265.liqbiop24-b053.
Abstract 4138955: Artificial intelligence-guided screening of rheumatic heart disease from single-view two-dimensional echocardiographyOikonomou E, Nascimento B, Camargos A, Lombo B, McNamara R, Karnik R, Sable C, Ribeiro A, Khera R. Abstract 4138955: Artificial intelligence-guided screening of rheumatic heart disease from single-view two-dimensional echocardiography. Circulation 2024, 150: a4138955-a4138955. DOI: 10.1161/circ.150.suppl_1.4138955.
Abstract 4118762: Large-scale multinational trends in the use of cardioprotective antihyperglycemic agents as first-line therapy in patients with type 2 diabetes and cardiovascular disease: a LEGEND-T2DM studyThangaraj P, Aminorroaya A, Dhingra L, Camargos A, Zhou J, Blacketer C, Bu F, Chai Y, Chattopadhyay S, Dorr D, Duarte-Salles T, Lau W, Liu Y, Lu Y, Man K, Minty E, Richter L, Ross J, Shah N, Ryan P, Schuemie M, Hripcsak G, Krumholz H, Suchard M, Khera R. Abstract 4118762: Large-scale multinational trends in the use of cardioprotective antihyperglycemic agents as first-line therapy in patients with type 2 diabetes and cardiovascular disease: a LEGEND-T2DM study. Circulation 2024, 150: a4118762-a4118762. DOI: 10.1161/circ.150.suppl_1.4118762.
Abstract 4139423: Glycemic Changes After Peer Group Exergaming and Step Goal Activities Among Adolescents With Type 1 DiabetesLukasik J, Nally L, Jeon S, Granados A, Weinzimer S, Ash G. Abstract 4139423: Glycemic Changes After Peer Group Exergaming and Step Goal Activities Among Adolescents With Type 1 Diabetes. Circulation 2024, 150: a4139423-a4139423. DOI: 10.1161/circ.150.suppl_1.4139423.
Abstract 4118451: A Real-world Evaluation of Longitudinal Healthcare Expenses in a Health System Registry of Type-2 Diabetes Mellitus and Cardiovascular Disease Enabled by the 21st Century Cures ActDhingra L, Aminorroaya A, Camargos A, Rajpura J, Mehanna S, TONNU-MIHARA I, Khera R. Abstract 4118451: A Real-world Evaluation of Longitudinal Healthcare Expenses in a Health System Registry of Type-2 Diabetes Mellitus and Cardiovascular Disease Enabled by the 21st Century Cures Act. Circulation 2024, 150: a4118451-a4118451. DOI: 10.1161/circ.150.suppl_1.4118451.
Abstract 4142708: DIgital REgistry for CardiomeTabolic conditions – Diabetes Mellitus (DIRECT-DM): A Large, Pragmatic, Multisite, Diverse Longitudinal Registry of Type 2 DiabetesCamargos A, Dhingra L, Aminorroaya A, Khera R. Abstract 4142708: DIgital REgistry for CardiomeTabolic conditions – Diabetes Mellitus (DIRECT-DM): A Large, Pragmatic, Multisite, Diverse Longitudinal Registry of Type 2 Diabetes. Circulation 2024, 150: a4142708-a4142708. DOI: 10.1161/circ.150.suppl_1.4142708.
Abstract 4142809: Artificial Intelligence Enabled Prediction of Future Structural Heart Disease and Cardiovascular Risk from Single-lead ElectrocardiogramsDhingra L, Aminorroaya A, Camargos A, Khunte A, Sangha V, Brant L, Barreto S, Ribeiro A, Krumholz H, Oikonomou E, Khera R. Abstract 4142809: Artificial Intelligence Enabled Prediction of Future Structural Heart Disease and Cardiovascular Risk from Single-lead Electrocardiograms. Circulation 2024, 150: a4142809-a4142809. DOI: 10.1161/circ.150.suppl_1.4142809.
Abstract 4142868: AI-enhanced Electrocardiographic Evaluation of Left Ventricular Ejection Fraction and Outflow Tract Gradient in Hypertrophic CardiomyopathySangha V, Aminorroaya A, Dhingra L, Camargos A, Oikonomou E, Khera R. Abstract 4142868: AI-enhanced Electrocardiographic Evaluation of Left Ventricular Ejection Fraction and Outflow Tract Gradient in Hypertrophic Cardiomyopathy. Circulation 2024, 150: a4142868-a4142868. DOI: 10.1161/circ.150.suppl_1.4142868.
Abstract 4144027: AI-enabled multimodal risk stratification of probable transthyretin amyloid cardiomyopathy from point-of-care electrocardiography and ultrasound: A report from the TRACE-AI StudyOikonomou E, Sangha V, Dhingra L, Aminorroaya A, Camargos A, Coppi A, Miller E, Gallegos C, Khera R. Abstract 4144027: AI-enabled multimodal risk stratification of probable transthyretin amyloid cardiomyopathy from point-of-care electrocardiography and ultrasound: A report from the TRACE-AI Study. Circulation 2024, 150: a4144027-a4144027. DOI: 10.1161/circ.150.suppl_1.4144027.
Abstract 4145329: Automated Detection of ST-elevation Myocardial Infarction in High-Acuity Settings Using Artificial Intelligence Applied to Images of 12-lead ElectrocardiogramsDhingra L, Biswas D, Khunte A, Sangha V, Shankar S, Aminorroaya A, Khera R. Abstract 4145329: Automated Detection of ST-elevation Myocardial Infarction in High-Acuity Settings Using Artificial Intelligence Applied to Images of 12-lead Electrocardiograms. Circulation 2024, 150: a4145329-a4145329. DOI: 10.1161/circ.150.suppl_1.4145329.
Abstract 4145351: Wearable-Echo-FM: An ECG-Echo Foundation Model for Single Lead ElectrocardiographyKnight E, Oikonomou E, Aminorroaya A, Khera R. Abstract 4145351: Wearable-Echo-FM: An ECG-Echo Foundation Model for Single Lead Electrocardiography. Circulation 2024, 150: a4145351-a4145351. DOI: 10.1161/circ.150.suppl_1.4145351.
Abstract 4146190: Multinational Clinical and Community-based Validation of PRESENT-SHD, an Ensemble Deep Learning Approach for the Detection of Multiple Structural Heart Disorders Using Electrocardiographic ImagesDhingra L, Aminorroaya A, Camargos A, Sangha V, Brant L, Barreto S, Ribeiro A, Krumholz H, Oikonomou E, Khera R. Abstract 4146190: Multinational Clinical and Community-based Validation of PRESENT-SHD, an Ensemble Deep Learning Approach for the Detection of Multiple Structural Heart Disorders Using Electrocardiographic Images. Circulation 2024, 150: a4146190-a4146190. DOI: 10.1161/circ.150.suppl_1.4146190.
Abstract 4146391: Multinational Validation of Fully Automated Diagnostic Reports using Artificial Intelligence-enabled Application for ECG ImagesKhunte A, Sangha V, Oikonomou E, Dhingra L, Aminorroaya A, Coppi A, Shankar S, Mortazavi B, Bhatt D, Krumholz H, Nadkarni G, Vaid A, Khera R. Abstract 4146391: Multinational Validation of Fully Automated Diagnostic Reports using Artificial Intelligence-enabled Application for ECG Images. Circulation 2024, 150: a4146391-a4146391. DOI: 10.1161/circ.150.suppl_1.4146391.
Abstract 4146465: Development and Multinational Validation of an Ensemble Deep Learning Algorithm for Detecting Structural Heart Diseases Using Noisy Single-lead ElectrocardiogramsAminorroaya A, Dhingra L, Khunte A, Sangha V, Camargos A, Shankar S, Sen S, Haynes N, Brant L, Barreto S, Ribeiro A, Krumholz H, Oikonomou E, Khera R. Abstract 4146465: Development and Multinational Validation of an Ensemble Deep Learning Algorithm for Detecting Structural Heart Diseases Using Noisy Single-lead Electrocardiograms. Circulation 2024, 150: a4146465-a4146465. DOI: 10.1161/circ.150.suppl_1.4146465.
Abstract 4146487: Prediction of New-onset Structural Heart Disease and Cardiovascular Risk Using Ensemble Deep Learning Applied to Electrocardiographic ImagesDhingra L, Aminorroaya A, Camargos A, Sangha V, Brant L, Barreto S, Ribeiro A, Krumholz H, Oikonomou E, Khera R. Abstract 4146487: Prediction of New-onset Structural Heart Disease and Cardiovascular Risk Using Ensemble Deep Learning Applied to Electrocardiographic Images. Circulation 2024, 150: a4146487-a4146487. DOI: 10.1161/circ.150.suppl_1.4146487.
Abstract 4146602: Deep Learning-enabled Detection of Aortic Stenosis from Noisy Single-lead ElectrocardiogramsAminorroaya A, Dhingra L, Camargos A, Shankar S, Oikonomou E, Khera R. Abstract 4146602: Deep Learning-enabled Detection of Aortic Stenosis from Noisy Single-lead Electrocardiograms. Circulation 2024, 150: a4146602-a4146602. DOI: 10.1161/circ.150.suppl_1.4146602.
Abstract 4146678: Artificial Intelligence-enhanced Interpretation of Single-lead Electrocardiogram in Normal Sinus Rhythm to Detect and Predict Atrial Fibrillation and FlutterAminorroaya A, Dhingra L, Camargos A, Oikonomou E, Khera R. Abstract 4146678: Artificial Intelligence-enhanced Interpretation of Single-lead Electrocardiogram in Normal Sinus Rhythm to Detect and Predict Atrial Fibrillation and Flutter. Circulation 2024, 150: a4146678-a4146678. DOI: 10.1161/circ.150.suppl_1.4146678.
Abstract 4139043: Artificial intelligence-enabled detection and phenotyping of left ventricular hypertrophy on real-world point-of-care cardiac ultrasonography and its implications for patient outcomesOikonomou E, Holste G, Coppi A, Baloescu C, McNamara R, Khera R. Abstract 4139043: Artificial intelligence-enabled detection and phenotyping of left ventricular hypertrophy on real-world point-of-care cardiac ultrasonography and its implications for patient outcomes. Circulation 2024, 150: a4139043-a4139043. DOI: 10.1161/circ.150.suppl_1.4139043.
Abstract 4136996: Co-morbid Insomnia and Obstructive Sleep Apnea (COMISA) are Related to Incident Hypertension in a 20-Year Retrospective Cohort Study of 1.3 million Younger Men and Women Veterans: Associations by SexGaffey A, ZINCHUK A, Yaggi H, brandt C, Haskell S, Burg M. Abstract 4136996: Co-morbid Insomnia and Obstructive Sleep Apnea (COMISA) are Related to Incident Hypertension in a 20-Year Retrospective Cohort Study of 1.3 million Younger Men and Women Veterans: Associations by Sex. Circulation 2024, 150: a4136996-a4136996. DOI: 10.1161/circ.150.suppl_1.4136996.
Sex‐specific topological structure associated with dementia via latent space estimationWang S, Wang Y, Xu F, Tian X, Fredericks C, Shen L, Zhao Y, Initiative F. Sex‐specific topological structure associated with dementia via latent space estimation. Alzheimer's & Dementia 2024 PMID: 39530632, DOI: 10.1002/alz.14266.
Abstract 4139107: Association of Patient Healthcare Information Exchange Systems at US Hospitals with 30-day Excess Days in Acute Care after Heart Failure HospitalizationCamargos A, Lin Z, Ross J, Khera R. Abstract 4139107: Association of Patient Healthcare Information Exchange Systems at US Hospitals with 30-day Excess Days in Acute Care after Heart Failure Hospitalization. Circulation 2024, 150: a4139107-a4139107. DOI: 10.1161/circ.150.suppl_1.4139107.
Abstract 4142835: Remote Patient Monitoring and Excess Readmission Rates for Cardiovascular Conditions at Hospitals in the United StatesCamargos A, Lin Z, Ross J, Khera R. Abstract 4142835: Remote Patient Monitoring and Excess Readmission Rates for Cardiovascular Conditions at Hospitals in the United States. Circulation 2024, 150: a4142835-a4142835. DOI: 10.1161/circ.150.suppl_1.4142835.
Abstract 4146319: Racial Disparities and Driving Factors in the AHA's Life's Essential 8 Among American Adults: Insights from NHANES 2011-2020Yang H, Huang C, Faridi K, Spatz E, Li Z, Krumholz H, Lu Y. Abstract 4146319: Racial Disparities and Driving Factors in the AHA's Life's Essential 8 Among American Adults: Insights from NHANES 2011-2020. Circulation 2024, 150: a4146319-a4146319. DOI: 10.1161/circ.150.suppl_1.4146319.
Abstract 4143806: Long-Term Risks of Cardiovascular Disease in the U.S. Population Based on the American Heart Association PREVENT EquationsFaridi K, Malik D, Essa M, Yang H, Spatz E, Krumholz H, Lu Y. Abstract 4143806: Long-Term Risks of Cardiovascular Disease in the U.S. Population Based on the American Heart Association PREVENT Equations. Circulation 2024, 150: a4143806-a4143806. DOI: 10.1161/circ.150.suppl_1.4143806.
Abstract 4145883: Elevated International Normalized Ratio Is Associated with Severity of Intracerebral Hemorrhage for Patients Taking Direct Oral AnticoagulantsLusk J, sun J, Mac Grory B, Schwamm L, Smith E, Fonarow G, Bhatt D, Saver J, Reeves M, Matsouaka R, Xian Y. Abstract 4145883: Elevated International Normalized Ratio Is Associated with Severity of Intracerebral Hemorrhage for Patients Taking Direct Oral Anticoagulants. Circulation 2024, 150: a4145883-a4145883. DOI: 10.1161/circ.150.suppl_1.4145883.
Abstract 4145446: Scalable Phenotyping of Heart Failure Across Multicenter, Non-Interoperable Health Systems Using Retrieval-Augmented Generation and Large Language ModelsShankar S, Thangaraj P, Adejumo P, Khera R. Abstract 4145446: Scalable Phenotyping of Heart Failure Across Multicenter, Non-Interoperable Health Systems Using Retrieval-Augmented Generation and Large Language Models. Circulation 2024, 150: a4145446-a4145446. DOI: 10.1161/circ.150.suppl_1.4145446.
Abstract 4147247: A Deep Learning Topic Analysis Approach for Enhancing Risk Assessment in Heart Failure Using Unstructured Clinical NotesAdejumo P, Camargos A, Khera R. Abstract 4147247: A Deep Learning Topic Analysis Approach for Enhancing Risk Assessment in Heart Failure Using Unstructured Clinical Notes. Circulation 2024, 150: a4147247-a4147247. DOI: 10.1161/circ.150.suppl_1.4147247.
Abstract 4147664: Retrieval-Augmented Generation for Extracting CHADS-VASc and HAS-BLED Risk Factors from Unstructured Clinical Notes in Patients with Atrial FibrillationAdejumo P, Thangaraj P, Shankar S, Khera R. Abstract 4147664: Retrieval-Augmented Generation for Extracting CHADS-VASc and HAS-BLED Risk Factors from Unstructured Clinical Notes in Patients with Atrial Fibrillation. Circulation 2024, 150: a4147664-a4147664. DOI: 10.1161/circ.150.suppl_1.4147664.
Abstract 4140669: Leveraging Large Language Models (LLMs) For Randomized Clinical Trial SummarizationMangla A, Thangaraj P, Khera R. Abstract 4140669: Leveraging Large Language Models (LLMs) For Randomized Clinical Trial Summarization. Circulation 2024, 150: a4140669-a4140669. DOI: 10.1161/circ.150.suppl_1.4140669.
Abstract 4141747: The OurHealth Study: A Decentralized Biobank of South Asian AmericansGanesh S, Bhattacharya R, Bhatnagar A, Madnani R, Oruganty B, Koyama S, Patel A, Paruchuri K, Parulkar S, Bhupathiraju S, Sengupta N, Khera A, Hornsby W, Gulati M, Khera R, Palaniappan L, Natarajan P. Abstract 4141747: The OurHealth Study: A Decentralized Biobank of South Asian Americans. Circulation 2024, 150: a4141747-a4141747. DOI: 10.1161/circ.150.suppl_1.4141747.
Abstract 4145357: Detecting ST Elevation Myocardial Infarction on a Noisy Single Limb-lead ECG: An Artificial Intelligence-enabled Approach Adaptable to Portable DevicesDhingra L, Khunte A, Shankar S, Khera R. Abstract 4145357: Detecting ST Elevation Myocardial Infarction on a Noisy Single Limb-lead ECG: An Artificial Intelligence-enabled Approach Adaptable to Portable Devices. Circulation 2024, 150: a4145357-a4145357. DOI: 10.1161/circ.150.suppl_1.4145357.
Abstract 4147560: Interoperable and Scalable Electronic Clinical Quality Measurement for Appropriate Use of Anticoagulation for Atrial Fibrillation in a Multicenter Health SystemThangaraj P, Dhingra L, Khera R. Abstract 4147560: Interoperable and Scalable Electronic Clinical Quality Measurement for Appropriate Use of Anticoagulation for Atrial Fibrillation in a Multicenter Health System. Circulation 2024, 150: a4147560-a4147560. DOI: 10.1161/circ.150.suppl_1.4147560.
Expanding artificial intelligence to understudied populations: congenital heart disease as the next frontierOikonomou E, Khera R. Expanding artificial intelligence to understudied populations: congenital heart disease as the next frontier. European Heart Journal 2024, ehae737. PMID: 39523016, DOI: 10.1093/eurheartj/ehae737.
RADT-12. DERIVING IMAGING BIOMARKERS FOR PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMA USING DEEP LEARNINGZhu J, Hager T, Chadha S, Sritharan D, Weiss D, Hossain S, Osenberg K, Moore N, Aneja S. RADT-12. DERIVING IMAGING BIOMARKERS FOR PRIMARY CENTRAL NERVOUS SYSTEM LYMPHOMA USING DEEP LEARNING. Neuro-Oncology 2024, 26: viii74-viii74. PMCID: PMC11553274, DOI: 10.1093/neuonc/noae165.0296.
Privacy of single-cell gene expression dataCho H. Privacy of single-cell gene expression data. Patterns 2024, 5: 101096. PMID: 39568471, PMCID: PMC11573887, DOI: 10.1016/j.patter.2024.101096.
Impact of the COVID-19 pandemic on hospital-based heart failure care in New South Wales, Australia: a linked data cohort studyMcIntyre D, Quintans D, Kazi S, Min H, He W, Marschner S, Khera R, Nassar N, Chow C. Impact of the COVID-19 pandemic on hospital-based heart failure care in New South Wales, Australia: a linked data cohort study. BMC Health Services Research 2024, 24: 1364. PMID: 39516863, PMCID: PMC11545568, DOI: 10.1186/s12913-024-11840-0.
Care Quality and Outcomes of Ischemic Stroke in Patients With Premorbid Dementia: Get With The Guidelines-Stroke RegistryGanesh A, Wang M, Schwamm L, Fonarow G, Messé S, Xian Y, Saver J, Smith E. Care Quality and Outcomes of Ischemic Stroke in Patients With Premorbid Dementia: Get With The Guidelines-Stroke Registry. Stroke 2024, 55: 2901-2905. PMID: 39503052, DOI: 10.1161/strokeaha.124.049027.
Sirtuin1 Suppresses Calcium Oxalate Nephropathy via Inhibition of Renal Proximal Tubular Cell Ferroptosis Through PGC‐1α‐mediated Transcriptional CoactivationDuan C, Li B, Liu H, Zhang Y, Yao X, Liu K, Wu X, Mao X, Wu H, Xu Z, Zhong Y, Hu Z, Gong Y, Xu H. Sirtuin1 Suppresses Calcium Oxalate Nephropathy via Inhibition of Renal Proximal Tubular Cell Ferroptosis Through PGC‐1α‐mediated Transcriptional Coactivation. Advanced Science 2024, e2408945. PMID: 39498889, DOI: 10.1002/advs.202408945.
Five-Year Evaluation of an Anal Cancer Screening Program in Men Who Have Sex With Men With HIV at 2 Academic Center ClinicsAchhra A, Chan E, Applebaum S, Guerrero M, Hao R, Pantel H, Virata M, Fikrig M, Barakat L. Five-Year Evaluation of an Anal Cancer Screening Program in Men Who Have Sex With Men With HIV at 2 Academic Center Clinics. Clinical Infectious Diseases 2024, ciae541. PMID: 39492696, DOI: 10.1093/cid/ciae541.
Validating International Classification of Diseases Code (ICD) 10th Revision Algorithms for Accurate Identification of Pulmonary EmbolismBikdeli B, Khairani C, Bejjani A, Lo Y, Mahajan S, Caraballo C, Jimenez J, Krishnathasan D, Zarghami M, Rashedi S, Jimenez D, Barco S, Secemsky E, Klok F, Hunsaker A, Aghayev A, Muriel A, Hussain M, Appah-Sampong A, Lu Y, Lin Z, Mojibian H, Aneja S, Khera R, Konstantinides S, Goldhaber S, Wang L, Zhou L, Monreal M, Piazza G, Krumholz H, Investigators P. Validating International Classification of Diseases Code (ICD) 10th Revision Algorithms for Accurate Identification of Pulmonary Embolism. Journal Of Thrombosis And Haemostasis 2024 PMID: 39505153, DOI: 10.1016/j.jtha.2024.10.013.
Natural Language Processing of Clinical Documentation to Assess Functional Status in Patients With Heart FailureAdejumo P, Thangaraj P, Dhingra L, Aminorroaya A, Zhou X, Brandt C, Xu H, Krumholz H, Khera R. Natural Language Processing of Clinical Documentation to Assess Functional Status in Patients With Heart Failure. JAMA Network Open 2024, 7: e2443925. PMID: 39509128, PMCID: PMC11544492, DOI: 10.1001/jamanetworkopen.2024.43925.
Diffusion-based Bayesian posterior distribution prediction of kinetic parameters in dynamic PETDjebra Y, Liu X, Marin T, Tiss A, Dhaynaut M, Guehl N, Johnson K, Fakhri G, Ma C, Ouyang J. Diffusion-based Bayesian posterior distribution prediction of kinetic parameters in dynamic PET. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10657955.
Multimodality Molecular Imaging of Brain Tumor Using Simultaneous [18F]FET-PET/MRSIMa C, Han P, Marin T, Zhuo Y, Shih H, Fakhri G. Multimodality Molecular Imaging of Brain Tumor Using Simultaneous [18F]FET-PET/MRSI. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10656528.
PET motion correction using subspace-based real-time MR imaging in simultaneous PET/MRMounime I, Marin T, Han P, Ouyang J, Gori P, Angelini E, Fakhri G, Ma C. PET motion correction using subspace-based real-time MR imaging in simultaneous PET/MR. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10657647.
DIANA - Detectability Investgations using Artificial Nodal AdditionsBayerlein R, Xia M, Xie H, Spencer B, Ouyang J, Fakhri G, Nardo L, Liu C, Badawi R. DIANA - Detectability Investgations using Artificial Nodal Additions. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10657528.
Integration of a continuously varying image-space PSF for a dual-panel ultra-high TOF-PET scannerChemli Y, Marin T, Orehar M, Dolenec R, Normandin M, Gascón D, Gola A, Grogg K, Pavón G, Razdevsek G, Pestotnik R, Fakhri G. Integration of a continuously varying image-space PSF for a dual-panel ultra-high TOF-PET scanner. 2024, 00: 1-1. DOI: 10.1109/nss/mic/rtsd57108.2024.10656225.
Flat Panel TOF-PET Detectors: a Simulation StudyOrehar M, Dolenec R, Fakhri G, Gascón D, Gola A, Korpar S, Križan P, Razdevšek G, Marin T, Chemli Y, Žontar D, Pestotnik R. Flat Panel TOF-PET Detectors: a Simulation Study. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10658250.
Long-Axial Field-Of-View Limited-Angle PET System with Ultra-High Time-Of-Flight and Depth-Of-InteractionMarin T, Chemli Y, Razdevšek G, Zhuo Y, Orehar M, Najmaoui Y, Dolenec R, Gascon D, Gola A, Benlloch J, Alamo J, Barbera J, Fernandez-Tenllado J, Gomez S, Korpar S, Krizan P, Majewski S, Manera R, Mariscal-Castilla A, Mauricio J, Merzi S, Morera C, Pavon G, Pavon N, Penna M, Seljak A, Studen A, Zontar D, Pestotnik R, Fakhri G. Long-Axial Field-Of-View Limited-Angle PET System with Ultra-High Time-Of-Flight and Depth-Of-Interaction. 2024, 00: 1-2. DOI: 10.1109/nss/mic/rtsd57108.2024.10658297.
A multi-trait epigenome-wide association study identified DNA methylation signature of inflammation among men with HIVChen J, Hui Q, Titanji B, So-Armah K, Freiberg M, Justice A, Xu K, Zhu X, Gwinn M, Marconi V, Sun Y. A multi-trait epigenome-wide association study identified DNA methylation signature of inflammation among men with HIV. Clinical Epigenetics 2024, 16: 152. PMID: 39488703, PMCID: PMC11531128, DOI: 10.1186/s13148-024-01763-2.
Distinct comorbidity phenotypes among post‐9/11 Veterans with epilepsy are linked to diverging outcomes and mortality risksPugh M, Clary H, Myers M, Kennedy E, Amuan M, Swan A, Hinds S, LaFrance W, Altalib H, Towne A, Henion A, White A, Baca C, Wang C. Distinct comorbidity phenotypes among post‐9/11 Veterans with epilepsy are linked to diverging outcomes and mortality risks. Epilepsia 2024 PMID: 39487827, DOI: 10.1111/epi.18170.
Introduction: Pain Management Collaboratory: updates, lessons learned, and future directionsKerns R, Brandt C, Peduzzi P. Introduction: Pain Management Collaboratory: updates, lessons learned, and future directions. Pain Medicine 2024, 25: s1-s3. PMCID: PMC11548851, DOI: 10.1093/pm/pnae097.
Utility of the PICOTS framework to assess clinical trial disruptions: monitoring the impact of COVID-19 in the Pain Management CollaboratoryPeduzzi P, Brandt C, Dearth C, Dziura J, Farrokhi S, George S, Kyriakides T, Long C, Mascha E, Patterson C, Rhon D, Kerns R. Utility of the PICOTS framework to assess clinical trial disruptions: monitoring the impact of COVID-19 in the Pain Management Collaboratory. Pain Medicine 2024, 25: s34-s40. PMID: 39514876, PMCID: PMC11548861, DOI: 10.1093/pm/pnae078.
PubMed Computed Authors in 2024: an open resource of disambiguated author names in biomedical literatureTian S, Chen Q, Comeau D, Wilbur W, Lu Z. PubMed Computed Authors in 2024: an open resource of disambiguated author names in biomedical literature. Bioinformatics 2024, 40: btae672. PMID: 39520405, PMCID: PMC11588201, DOI: 10.1093/bioinformatics/btae672.
Challenges in clinical data sharing—experiences of the pain management collaboratoryJannace K, Brandt C, Silliker N, Adepoju B, Raffanello M, Matheny M, Roddy W, Erdos J. Challenges in clinical data sharing—experiences of the pain management collaboratory. Pain Medicine 2024, 25: s31-s33. PMID: 39514872, PMCID: PMC11548850, DOI: 10.1093/pm/pnae063.
Strategies for working with pragmatic clinical trial observational data—lessons learned from the Pain Management CollaboratoryMatheny M, Brandt C, Jannace K, Roddy W, Raffanello M, Silliker N, Erdos J. Strategies for working with pragmatic clinical trial observational data—lessons learned from the Pain Management Collaboratory. Pain Medicine 2024, 25: s28-s30. PMID: 39514883, PMCID: PMC11548852, DOI: 10.1093/pm/pnae093.
A variational graph-partitioning approach to modeling protein liquid-liquid phase separationWang G, Warrell J, Zheng S, Gerstein M. A variational graph-partitioning approach to modeling protein liquid-liquid phase separation. Cell Reports Physical Science 2024, 5: 102292. DOI: 10.1016/j.xcrp.2024.102292.
Deep-RPD-Net: A 3D Deep Network for Detection of Reticular Pseudodrusen on Optical Coherence Tomography ScansElsawy A, Keenan T, Thavikulwat A, Lu A, Bellur S, Mukherjee S, Agron E, Chen Q, Chew E, Lu Z. Deep-RPD-Net: A 3D Deep Network for Detection of Reticular Pseudodrusen on Optical Coherence Tomography Scans. Ophthalmology Science 2024, 100655. DOI: 10.1016/j.xops.2024.100655.
REliable PIcking by Consensus (REPIC): a consensus methodology for harnessing multiple cryo-EM particle pickersCameron C, Seager S, Sigworth F, Tagare H, Gerstein M. REliable PIcking by Consensus (REPIC): a consensus methodology for harnessing multiple cryo-EM particle pickers. Communications Biology 2024, 7: 1421. PMID: 39482410, PMCID: PMC11528043, DOI: 10.1038/s42003-024-07045-0.
Defining Documentation Burden (DocBurden) and Excessive DocBurden for All Health Professionals: A Scoping ReviewLevy D, Withall J, Mishuris R, Tiase V, Diamond C, Douthit B, Grabowska M, Lee R, Moy A, Sengstack P, Adler-Milstein J, Detmer D, Johnson K, Cimino J, Corley S, Murphy J, Rosenbloom S, Cato K, Rossetti S. Defining Documentation Burden (DocBurden) and Excessive DocBurden for All Health Professionals: A Scoping Review. Applied Clinical Informatics 2024, 15: 898-913. PMID: 39137903, PMCID: PMC11524753, DOI: 10.1055/a-2385-1654.
Posttraumatic Stress Disorder, Obesity, and Accelerated Epigenetic Aging Among US Military VeteransFischer I, Na P, Nagamatsu S, Jeste D, Cabrera-Mendoza B, Montalvo-Ortiz J, Krystal J, Polimanti R, Gelernter J, Pietrzak R. Posttraumatic Stress Disorder, Obesity, and Accelerated Epigenetic Aging Among US Military Veterans. JAMA Psychiatry 2024, 81 PMID: 39476130, PMCID: PMC11581715, DOI: 10.1001/jamapsychiatry.2024.3403.
Eligibility for Anti-Obesity Medications Among Medicare Beneficiaries with Overweight or ObesityChetty A, Khunte M, Chen A, Jastreboff A, Krumholz H, Lu Y. Eligibility for Anti-Obesity Medications Among Medicare Beneficiaries with Overweight or Obesity. Journal Of General Internal Medicine 2024, 1-3. PMID: 39477867, DOI: 10.1007/s11606-024-09178-8.
Heritability and genetic contribution analysis of structural-functional coupling in human brainDai W, Zhang Z, Song P, Zhang H, Zhao Y. Heritability and genetic contribution analysis of structural-functional coupling in human brain. Imaging Neuroscience 2024, 2: 1-19. DOI: 10.1162/imag_a_00346.
A machine learning framework to adjust for learning effects in medical device safety evaluationKoola J, Ramesh K, Mao J, Ahn M, Davis S, Govindarajulu U, Perkins A, Westerman D, Ssemaganda H, Speroff T, Ohno-Machado L, Ramsay C, Sedrakyan A, Resnic F, Matheny M. A machine learning framework to adjust for learning effects in medical device safety evaluation. Journal Of The American Medical Informatics Association 2024, ocae273. PMID: 39471493, DOI: 10.1093/jamia/ocae273.
HEART: Learning better representation of EHR data with a heterogeneous relation-aware transformerHuang T, Rizvi S, Thakur R, Socrates V, Gupta M, van Dijk D, Taylor R, Ying R. HEART: Learning better representation of EHR data with a heterogeneous relation-aware transformer. Journal Of Biomedical Informatics 2024, 159: 104741. PMID: 39476994, DOI: 10.1016/j.jbi.2024.104741.
Internet-Based Social Connections of Black American College Students in Pre–COVID-19 and Peri–COVID-19 Pandemic Periods: Network AnalysisLee E, Kim H, Esener Y, McCall T. Internet-Based Social Connections of Black American College Students in Pre–COVID-19 and Peri–COVID-19 Pandemic Periods: Network Analysis. Journal Of Medical Internet Research 2024, 26: e55531. PMID: 39467280, PMCID: PMC11555443, DOI: 10.2196/55531.
Artificial intelligence applied to electrocardiographic images for the risk stratification of cancer therapeutics-related cardiac dysfunctionOikonomou E, Sangha V, Dhingra L, Aminorroaya A, Coppi A, Krumholz H, Baldassarre L, Khera R. Artificial intelligence applied to electrocardiographic images for the risk stratification of cancer therapeutics-related cardiac dysfunction. European Heart Journal 2024, 45: ehae666.3190. DOI: 10.1093/eurheartj/ehae666.3190.
Sex differences in proteomics of cardiovascular disease: results from the Yale-CMD registryLiu Y, Wang Z, Collins S, Testani J, Kleinstein S, Safdar B. Sex differences in proteomics of cardiovascular disease: results from the Yale-CMD registry. European Heart Journal 2024, 45: ehae666.3091. DOI: 10.1093/eurheartj/ehae666.3091.
The Feasibility and Acceptability of a Clinical Pharmacist-delivered Intervention to Reduce Bothersome Health Symptoms from Polypharmacy and Alcohol Use and Communicate Risk among People with HIV: Pilot Study ProtocolWomack J, Leblanc M, Sager A, Zaets L, Maisto S, Garcia A, Aoun-Barakat L, Brown S, Edelman E, Fiellin D, Fisher J, Fraenkel L, Kidwai-Khan F, Marconi V, Martino S, Pulk R, Satre D, Virata M, Justice A, Hsieh E. The Feasibility and Acceptability of a Clinical Pharmacist-delivered Intervention to Reduce Bothersome Health Symptoms from Polypharmacy and Alcohol Use and Communicate Risk among People with HIV: Pilot Study Protocol. AIDS And Behavior 2024, 1-15. PMID: 39465468, DOI: 10.1007/s10461-024-04533-6.
Artificial intelligence-guided screening of under-recognized cardiomyopathies adapted for point-of-care echocardiographyOikonomou E, Holste G, Coppi A, Mcnamara R, Nadkarni G, Krumholz H, Wang Z, Miller E, Khera R. Artificial intelligence-guided screening of under-recognized cardiomyopathies adapted for point-of-care echocardiography. European Heart Journal 2024, 45: ehae666.157. DOI: 10.1093/eurheartj/ehae666.157.
Characterizing the progression of subclinical cardiac amyloidosis through artificial intelligence applied to electrocardiographic images and echocardiogramsOikonomou E, Sangha V, Coppi A, Krumholz H, Miller E, Khera R. Characterizing the progression of subclinical cardiac amyloidosis through artificial intelligence applied to electrocardiographic images and echocardiograms. European Heart Journal 2024, 45: ehae666.2089. DOI: 10.1093/eurheartj/ehae666.2089.
Artificial intelligence applied to electrocardiographic images for scalable screening of cardiac amyloidosisSangha V, Oikonomou E, Krumholz H, Miller E, Khera R. Artificial intelligence applied to electrocardiographic images for scalable screening of cardiac amyloidosis. European Heart Journal 2024, 45: ehae666.3436. DOI: 10.1093/eurheartj/ehae666.3436.

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