2019
Development and optimization of a hybridization technique to type the classical class I and class II B genes of the chicken MHC
Potts N, Bichet C, Merat L, Guitton E, Krupa A, Burke T, Kennedy L, Sorci G, Kaufman J. Development and optimization of a hybridization technique to type the classical class I and class II B genes of the chicken MHC. Immunogenetics 2019, 71: 647-663. PMID: 31761978, PMCID: PMC6900278, DOI: 10.1007/s00251-019-01149-2.Peer-Reviewed Original ResearchConceptsMajor histocompatibility complex genesSingle nucleotide polymorphismsClassical class IMajor histocompatibility complexClass II B genesChicken MHC haplotypesStrand-mediated conformational analysisGenes of chickenChicken major histocompatibility complexMajor histocompatibility complex allelesSusceptibility to infectious pathogensB geneInfectious pathogensClass II BImmune responses to infectious pathogensNucleotide polymorphismsResponse to infectious pathogensTyping protocolHaplotypesClass IMHC haplotypesChickenAllelesPathogensClass I allelesBi-Functional Chicken Immunoglobulin-Like Receptors With a Single Extracellular Domain (ChIR-AB1): Potential Framework Genes Among a Relatively Stable Number of Genes Per Haplotype
Meziane E, Potts N, Viertlboeck B, Løvlie H, Krupa A, Burke T, Brown S, Watson K, Richardson D, Pizzari T, Göbel T, Kaufman J. Bi-Functional Chicken Immunoglobulin-Like Receptors With a Single Extracellular Domain (ChIR-AB1): Potential Framework Genes Among a Relatively Stable Number of Genes Per Haplotype. Frontiers In Immunology 2019, 10: 2222. PMID: 31620133, PMCID: PMC6760009, DOI: 10.3389/fimmu.2019.02222.Peer-Reviewed Original ResearchConceptsLeukocyte receptor complexRed junglefowlIg-like receptorsChicken Ig-like receptorsLeukocyte Ig-like receptorsCHIR-AB1Chicken linesExtracellular domainImmunoglobulin-like (Ig-likeHighly-related genesTrios of parentsExtracellular Ig-like domainsStrand-mediated conformational analysisIg-like domainsCommercial chicken linesPositively-charged residuesKiller Ig-like receptorsExperimental chicken linesCytoplasmic tailSequencing studiesIg-likeFramework genesTransmembrane regionSequence relationshipsEgg-laying chickens
2008
Single locus typing of MHC class I and class II B loci in a population of red jungle fowl
Worley K, Gillingham M, Jensen P, Kennedy L, Pizzari T, Kaufman J, Richardson D. Single locus typing of MHC class I and class II B loci in a population of red jungle fowl. Immunogenetics 2008, 60: 233-247. PMID: 18389232, DOI: 10.1007/s00251-008-0288-0.Peer-Reviewed Original ResearchConceptsRed jungle fowlJungle fowlMajor histocompatibility complexClass II B lociMHC diversityExcess of non-synonymous substitutionsReference strand-mediated conformational analysisEstimates of genetic variationDomestic chickensMajor histocompatibility complex regionNon-synonymous substitutionsStrand-mediated conformational analysisStrength of selectionMultilocus measuresDiversifying selectionMeasures of diversityGene organisationIndividual lociExpression locusClass II BGenetic variationCaptive populationsWild ancestorGallus gallusB locus
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