2022
Sensing complementary temporal features of odor signals enhances navigation of diverse turbulent plumes
Jayaram V, Kadakia N, Emonet T. Sensing complementary temporal features of odor signals enhances navigation of diverse turbulent plumes. ELife 2022, 11: e72415. PMID: 35072625, PMCID: PMC8871351, DOI: 10.7554/elife.72415.Peer-Reviewed Original Research
2013
Adaptation Dynamics in Densely Clustered Chemoreceptors
Pontius W, Sneddon MW, Emonet T. Adaptation Dynamics in Densely Clustered Chemoreceptors. PLOS Computational Biology 2013, 9: e1003230. PMID: 24068908, PMCID: PMC3777915, DOI: 10.1371/journal.pcbi.1003230.Peer-Reviewed Original ResearchMeSH KeywordsAdaptation, PhysiologicalChemoreceptor CellsChemotaxisEscherichia coliKineticsMethylationModels, TheoreticalConceptsOrganisms senseChemotaxis pathwayTransmembrane receptorsNutrient gradientsReceptor methylationProtein abundanceReceptor substrateBacterial chemotaxisReceptor activityModification systemPathway constituentsEscherichia coliIndividual cellsEnvironmental stimuliFunctional robustnessExpression levelsMechanistic relationshipEnzymeModel systemEnzyme kineticsChemotaxis systemPrecise adaptationAdaptation dynamicsReceptor modificationModification kinetics
2011
Guidelines for visualizing and annotating rule-based models
Chylek LA, Hu B, Blinov ML, Emonet T, Faeder JR, Goldstein B, Gutenkunst RN, Haugh JM, Lipniacki T, Posner RG, Yang J, Hlavacek WS. Guidelines for visualizing and annotating rule-based models. Molecular Omics 2011, 7: 2779-2795. PMID: 21647530, PMCID: PMC3168731, DOI: 10.1039/c1mb05077j.Peer-Reviewed Original Research