2024
Lessons learned from the IMMREP23 TCR-epitope prediction challenge
Nielsen M, Eugster A, Jensen M, Goel M, Tiffeau-Mayer A, Pelissier A, Valkiers S, Martínez M, Meynard-Piganeeau B, Greiff V, Mora T, Walczak A, Croce G, Moreno D, Gfeller D, Meysman P, Barton J. Lessons learned from the IMMREP23 TCR-epitope prediction challenge. ImmunoInformatics 2024, 16: 100045. DOI: 10.1016/j.immuno.2024.100045.Peer-Reviewed Original ResearchData leakageIssue of data leakageT cell receptorPerformance of proposed methodsPrediction challengeTraining dataBenchmarking CompetitionPMHC targetsRandom performanceTCR-pMHC interactionsInteraction of T-cell receptorsParticipating teamsCellular immune systemData setsTest dataImmune systemPerformanceNarrow space
2023
Benchmarking solutions to the T-cell receptor epitope prediction problem: IMMREP22 workshop report
Meysman P, Barton J, Bravi B, Cohen-Lavi L, Karnaukhov V, Lilleskov E, Montemurro A, Nielsen M, Mora T, Pereira P, Postovskaya A, Martínez M, Fernandez-de-Cossio-Diaz J, Vujkovic A, Walczak A, Weber A, Yin R, Eugster A, Sharma V. Benchmarking solutions to the T-cell receptor epitope prediction problem: IMMREP22 workshop report. ImmunoInformatics 2023, 9: 100024. DOI: 10.1016/j.immuno.2023.100024.Peer-Reviewed Original Research