Research

Academic Groups

There are two primary academic groups in the MRRC: Magnetic Resonance Imaging and Magnetic Resonance Spectroscopy. Both are a part of the Division of Bioimaging Sciences in the Deaprtmentment of Diagnostic Radiology at the Yale School of Medicine.

Please visit individual faculty pages for their current research projects and research interests.

A list of useful research resources available to our faculty can be found here.

A comprehensive list of scholarly publications of research by faculty in MRRC can be found here, sorted by year.

MRRC Publications

2020

Tumor-targeted pH-low insertion peptide delivery of theranostic gadolinium nanoparticles for image-guided nanoparticle-enhanced radiation therapy.Liu W, Deacon J, Yan H, Sun B, Liu Y, Hegan D, Li Q, Coman D, Parent M, Hyder F, Roberts K, Nath R, Tillement O, Engelman D, Glazer P. Transl Oncol. 2020 Nov; 2020 Aug 4. PMID: 32763504.
Genomic alterations in Turcot syndrome: Insights from whole exome sequencing.Karschnia P, Erson-Omay EZ, Huttner AJ, Kaulen LD, Duran D, Fulbright RK, Günel M, Baehring JM. J Neurol Sci. 2020 Oct 15; 2020 Jul 25. PMID: 32739502.
Functional brain connectivity in ex utero premature infants compared to in utero fetuses.De Asis-Cruz J, Kapse K, Basu SK, Said M, Scheinost D, Murnick J, Chang T, du Plessis A, Limperopoulos C. Neuroimage. 2020 Oct 1; 2020 Jun 11. PMID: 32534962.
Reevaluation of Astrocyte-Neuron Energy Metabolism with Astrocyte Volume Fraction Correction: Impact on Cellular Glucose Oxidation Rates, Glutamate-Glutamine Cycle Energetics, Glycogen Levels and Utilization Rates vs. Exercising Muscle, and Na⁺/K⁺ Pumping Rates.Dienel GA, Rothman DL. Neurochem Res. 2020 Sep 18; 2020 Sep 18. PMID: 32948935.
Spectral editing in ¹ H magnetic resonance spectroscopy: Experts' consensus recommendations.Choi IY, Andronesi OC, Barker P, Bogner W, Edden RAE, Kaiser LG, Lee P, Marjańska M, Terpstra M, de Graaf RA. NMR Biomed. 2020 Sep 18; 2020 Sep 18. PMID: 32946145.
Mapping Lithium in the Brain: New 3-Dimensional Methodology Reveals Regional Distribution in Euthymic Patients With Bipolar Disorder.Mason GF, Krystal JH. Biol Psychiatry. 2020 Sep 1. PMID: 32792052.
In vivo MRS measurement of 2-hydroxyglutarate in patient-derived IDH-mutant xenograft mouse models versus glioma patients.Tiwari V, Mashimo T, An Z, Vemireddy V, Piccirillo S, Askari P, Hulsey KM, Zhang S, de Graaf RA, Patel TR, Pan E, Mickey BE, Maher EA, Bachoo RM, Choi C. Magn Reson Med. 2020 Sep; 2020 Jan 30. PMID: 32003035.
Neurofeedback.Hampson M, Ruiz S, Ushiba J. Neuroimage. 2020 Sep; 2019 Dec 18. PMID: 31863913.
Molecular MRI of the Immuno-Metabolic Interplay in a Rabbit Liver Tumor Model: A Biomarker for Resistance Mechanisms in Tumor-targeted Therapy?Savic LJ, Doemel LA, Schobert IT, Montgomery RR, Joshi N, Walsh JJ, Santana J, Pekurovsky V, Zhang X, Lin M, Adam L, Boustani A, Duncan J, Leng L, Bucala RJ, Goldberg SN, Hyder F, Coman D, Chapiro J. Radiology. 2020 Sep; 2020 Jul 7. PMID: 32633675.
Association of Prefrontal-Striatal Functional Pathology With Alcohol Abstinence Days at Treatment Initiation and Heavy Drinking After Treatment Initiation.Blaine SK, Wemm S, Fogelman N, Lacadie C, Seo D, Scheinost D, Sinha R. Am J Psychiatry. 2020 Aug 28; 2020 Aug 28. PMID: 32854534.
How Tasks Change Whole-Brain Functional Organization to Reveal Brain-Phenotype Relationships.Greene AS, Gao S, Noble S, Scheinost D, Constable RT. Cell Rep. 2020 Aug 25. PMID: 32846124.
Terminology and concepts for the characterization of in vivo MR spectroscopy methods and MR spectra: Background and experts' consensus recommendations.Kreis R, Boer V, Choi IY, Cudalbu C, de Graaf RA, Gasparovic C, Heerschap A, Krššák M, Lanz B, Maudsley AA, Meyerspeer M, Near J, Öz G, Posse S, Slotboom J, Terpstra M, Tkáč I, Wilson M, Bogner W. NMR Biomed. 2020 Aug 17; 2020 Aug 17. PMID: 32808407.
Diffuse white matter loss in a transgenic rat model of cerebral amyloid angiopathy.Lee H, Xu F, Liu X, Koundal S, Zhu X, Davis J, Yanez D, Schrader J, Stanisavljevic A, Rothman DL, Wardlaw J, Van Nostrand WE, Benveniste H. J Cereb Blood Flow Metab. 2020 Aug 13; 2020 Aug 13. PMID: 32791876.
Magnetic resonance image connectivity analysis provides evidence of central nervous system mode of action for parasacral transcutaneous electro neural stimulation - A pilot study.Netto JMB, Scheinost D, Onofrey JA, Franco I. J Pediatr Urol. 2020 Aug 13; 2020 Aug 13. PMID: 32873504.
OPERA: a novel method to reduce ghost and aliasing artifacts.Dell'Orso A, Positano V, Arisi G, d'Errico F, Taddei A, Banchi B, De Felice C. MAGMA. 2020 Aug 12; 2020 Aug 12. PMID: 32785807.
Toward Addiction Prediction: An Overview of Cross-Validated Predictive Modeling Findings and Considerations for Future Neuroimaging Research.Yip SW, Kiluk B, Scheinost D. Biol Psychiatry Cogn Neurosci Neuroimaging. 2020 Aug; 2019 Nov 12. PMID: 31932230.
Connectome-based models can predict early symptom improvement in major depressive disorder.Ju Y, Horien C, Chen W, Guo W, Lu X, Sun J, Dong Q, Liu B, Liu J, Yan D, Wang M, Zhang L, Guo H, Zhao F, Zhang Y, Shen X, Constable RT, Li L. J Affect Disord. 2020 Aug 1; 2020 May 11. PMID: 32560939.
Left Atrial Late Gadolinium Enhancement is Associated With Incident Atrial Fibrillation as Detected by Continuous Monitoring With Implantable Loop Recorders.Bertelsen L, Diederichsen SZ, Haugan KJ, Brandes A, Graff C, Krieger D, Kronborg C, Køber L, Peters DC, Olesen MS, Højberg S, Vejlstrup N, Svendsen JH. JACC Cardiovasc Imaging. 2020 Aug; 2020 Jun 17. PMID: 32563642.
Identification of a brain fingerprint for overweight and obesity.Farruggia MC, van Kooten MJ, Perszyk EE, Burke MV, Scheinost D, Constable RT, Small DM. Physiol Behav. 2020 Aug 1; 2020 May 14. PMID: 32417645.
Idarubicin-Loaded ONCOZENE Drug-Eluting Bead Chemoembolization in a Rabbit Liver Tumor Model: Investigating Safety, Therapeutic Efficacy, and Effects on Tumor Microenvironment.Borde T, Laage Gaupp F, Geschwind JF, Savic LJ, Miszczuk M, Rexha I, Adam L, Walsh JJ, Huber S, Duncan JS, Peters DC, Sinusas A, Schlachter T, Gebauer B, Hyder F, Coman D, van Breugel JMM, Chapiro J. J Vasc Interv Radiol. 2020 Jul 17; 2020 Jul 17. PMID: 32684417.
Model-based evaluation of the microhemodynamic effects of PEGylated HBOC molecules in the rat brain cortex: a laser speckle imaging study.Portörő I, Mukli P, Kocsis L, Hermán P, Caccia D, Perrella M, Mozzarelli A, Ronda L, Mathe D, Eke A. Biomed Opt Express. 2020 Aug 1; 2020 Jul 9. PMID: 32923034.
Correction to: A quantitative model based on clinically relevant MRI features differentiates lower grade gliomas and glioblastoma.Cao H, Erson-Omay EZ, Li X, Günel M, Moliterno J, Fulbright RK. Eur Radiol. 2020 Jul. PMID: 32152743.
Impaired neuronal and astroglial metabolic activity in chronic unpredictable mild stress model of depression: Reversal of behavioral and metabolic deficit with lanicemine.Mishra PK, Adusumilli M, Deolal P, Mason GF, Kumar A, Patel AB. Neurochem Int. 2020 Jul; 2020 Apr 28. PMID: 32360130.
Associations between different dimensions of prenatal distress, neonatal hippocampal connectivity, and infant memory.Scheinost D, Spann MN, McDonough L, Peterson BS, Monk C. Neuropsychopharmacology. 2020 Jul; 2020 Apr 18. PMID: 32305039.
B₀ shimming for in vivo magnetic resonance spectroscopy: Experts' consensus recommendations.Juchem C, Cudalbu C, de Graaf RA, Gruetter R, Henning A, Hetherington HP, Boer VO. NMR Biomed. 2020 Jun 28; 2020 Jun 28. PMID: 32596978.
Oxygen extraction fraction mapping with multi-parametric quantitative BOLD MRI: Reduced transverse relaxation bias using 3D-GraSE imaging.Kaczmarz S, Hyder F, Preibisch C. Neuroimage. 2020 Jun 26; 2020 Jun 26. PMID: 32599265.
Therapeutic considerations in a case of progressive encephalomyelitis with rigidity and myoclonus.Gluck L, Hernandez AL, Wesley SF, Fulbright RK, Longbrake EE, Stathopoulos P. J Neurol Sci. 2020 Jun 18; 2020 Jun 18. PMID: 32593886.
Dynamic multicoil technique (DYNAMITE) MRI on human brain.Juchem C, Theilenberg S, Kumaragamage C, Mullen M, DelaBarre L, Adriany G, Brown PB, McIntyre S, Nixon TW, Garwood M, de Graaf RA. Magn Reson Med. 2020 Jun 16; 2020 Jun 16. PMID: 32544274.
Elevated homocarnosine and GABA in subject on isoniazid as assessed through 1H MRS at 7T.Landheer K, Prinsen H, Petroff OA, Rothman DL, Juchem C. Anal Biochem. 2020 Jun 15; 2020 Apr 14. PMID: 32302606.
Randomized, Sham-Controlled Trial of Real-Time Functional Magnetic Resonance Imaging Neurofeedback for Tics in Adolescents With Tourette Syndrome.Sukhodolsky DG, Walsh C, Koller WN, Eilbott J, Rance M, Fulbright RK, Zhao Z, Bloch MH, King R, Leckman JF, Scheinost D, Pittman B, Hampson M. Biol Psychiatry. 2020 Jun 15; 2019 Aug 13. PMID: 31668476.
Primary dural lymphomas: Clinical presentation, management, and outcome.Karschnia P, Batchelor TT, Jordan JT, Shaw B, Winter SF, Barbiero FJ, Kaulen LD, Thon N, Tonn JC, Huttner AJ, Fulbright RK, Loeffler J, Dietrich J, Baehring JM. Cancer. 2020 Jun 15; 2020 Mar 16. PMID: 32176324.
A Critically Ill Patient With Central Nervous System Tuberculosis and Negative Initial Workup.Zubair AS, Landreneau M, Witsch J, Fulbright RK, Huttner A, Sheth KN, Hwang DY. Front Neurol. 2020; 2020 Jun 12. PMID: 32595583.
Altered frontal cortex functioning in emotion regulation and hopelessness in bipolar disorder.Sankar A, Purves K, Colic L, Cox Lippard ET, Millard H, Fan S, Spencer L, Wang F, Pittman B, Constable RT, Gross JJ, Blumberg HP. Bipolar Disord. 2020 Jun 10; 2020 Jun 10. PMID: 32521570.
Sparse Data-Driven Learning for Effective and Efficient Biomedical Image Segmentation.Onofrey JA, Staib LH, Huang X, Zhang F, Papademetris X, Metaxas D, Rueckert D, Duncan JS. Annu Rev Biomed Eng. 2020 Jun 4; 2020 Mar 13. PMID: 32169002.
Cell-type specific modulation of NMDA receptors triggers antidepressant actions.Pothula S, Kato T, Liu RJ, Wu M, Gerhard D, Shinohara R, Sliby AN, Chowdhury GMI, Behar KL, Sanacora G, Banerjee P, Duman RS. Mol Psychiatry. 2020 Jun 2; 2020 Jun 2. PMID: 32488125.
Consensus on the reporting and experimental design of clinical and cognitive-behavioural neurofeedback studies (CRED-nf checklist).Ros T, Enriquez-Geppert S, Zotev V, Young KD, Wood G, Whitfield-Gabrieli S, Wan F, Vuilleumier P, Vialatte F, Van De Ville D, Todder D, Surmeli T, Sulzer JS, Strehl U, Sterman MB, Steiner NJ, Sorger B, Soekadar SR, Sitaram R, Sherlin LH, Schönenberg M, Scharnowski F, Schabus M, Rubia K, Rosa A, Reiner M, Pineda JA, Paret C, Ossadtchi A, Nicholson AA, Nan W, Minguez J, Micoulaud-Franchi JA, Mehler DMA, Lührs M, Lubar J, Lotte F, Linden DEJ, Lewis-Peacock JA, Lebedev MA, Lanius RA, Kübler A, Kranczioch C, Koush Y, Konicar L, Kohl SH, Kober SE, Klados MA, Jeunet C, Janssen TWP, Huster RJ, Hoedlmoser K, Hirshberg LM, Heunis S, Hendler T, Hampson M, Guggisberg AG, Guggenberger R, Gruzelier JH, Göbel RW, Gninenko N, Gharabaghi A, Frewen P, Fovet T, Fernández T, Escolano C, Ehlis AC, Drechsler R, Christopher deCharms R, Debener S, De Ridder D, Davelaar EJ, Congedo M, Cavazza M, Breteler MHM, Brandeis D, Bodurka J, Birbaumer N, Bazanova OM, Barth B, Bamidis PD, Auer T, Arns M, Thibault RT. Brain. 2020 Jun 1. PMID: 32176800.
Early life stress and glutamate neurotransmission in major depressive disorder.Averill LA, Abdallah CG, Fenton LR, Fasula MK, Jiang L, Rothman DL, Mason GF, Sanacora G. Eur Neuropsychopharmacol. 2020 Jun; 2020 May 15. PMID: 32418842.
A quantitative model based on clinically relevant MRI features differentiates lower grade gliomas and glioblastoma.Cao H, Erson-Omay EZ, Li X, Günel M, Moliterno J, Fulbright RK. Eur Radiol. 2020 Jun; 2020 Feb 5. PMID: 32025832.
APOE genotype-dependent pharmacogenetic responses to rapamycin for preventing Alzheimer's disease.Lin AL, Parikh I, Yanckello LM, White RS, Hartz AMS, Taylor CE, McCulloch SD, Thalman SW, Xia M, McCarty K, Ubele M, Head E, Hyder F, Sanganahalli BG. Neurobiol Dis. 2020 Jun; 2020 Mar 12. PMID: 32173556.
Hippocampal seed connectome-based modeling predicts the feeling of stress.Goldfarb EV, Rosenberg MD, Seo D, Constable RT, Sinha R. Nat Commun. 2020 May 27; 2020 May 27. PMID: 32461583.
Connectome-based neurofeedback: A pilot study to improve sustained attention.Scheinost D, Hsu TW, Avery EW, Hampson M, Constable RT, Chun MM, Rosenberg MD. Neuroimage. 2020 May 15; 2020 Feb 27. PMID: 32114151.
Orthonasal versus retronasal glomerular activity in rat olfactory bulb by fMRI.Sanganahalli BG, Baker KL, Thompson GJ, Herman P, Shepherd GM, Verhagen JV, Hyder F. Neuroimage. 2020 May 15; 2020 Feb 20. PMID: 32087375.
Loss of nucleus accumbens low-frequency fluctuations is a signature of chronic pain.Makary MM, Polosecki P, Cecchi GA, DeAraujo IE, Barron DS, Constable TR, Whang PG, Thomas DA, Mowafi H, Small DM, Geha P. Proc Natl Acad Sci U S A. 2020 May 5; 2020 Apr 20. PMID: 32312809.
Valvular imaging in the era of feature-tracking: A slice-following cardiac MR sequence to measure mitral flow.Seemann F, Heiberg E, Carlsson M, Gonzales RA, Baldassarre LA, Qiu M, Peters DC. J Magn Reson Imaging. 2020 May; 2019 Oct 25. PMID: 31654470.
Robust outer volume suppression utilizing elliptical pulsed second order fields (ECLIPSE) for human brain proton MRSI.Kumaragamage C, De Feyter HM, Brown P, McIntyre S, Nixon TW, de Graaf RA. Magn Reson Med. 2020 May; 2019 Nov 19. PMID: 31742799.
Extracellular pH mapping of liver cancer on a clinical 3T MRI scanner.Coman D, Peters DC, Walsh JJ, Savic LJ, Huber S, Sinusas AJ, Lin M, Chapiro J, Constable RT, Rothman DL, Duncan JS, Hyder F. Magn Reson Med. 2020 May; 2019 Nov 5. PMID: 31691371.
Interleaved, undersampled radial multiple-acquisition steady-state free precession for improved left atrial cine imaging.Robb JS, Hu C, Peters DC. Magn Reson Med. 2020 May; 2019 Oct 12. PMID: 31605555.
De novo damaging variants associated with congenital heart diseases contribute to the connectome.Ji W, Ferdman D, Copel J, Scheinost D, Shabanova V, Brueckner M, Khokha MK, Ment LR. Sci Rep. 2020 Apr 27; 2020 Apr 27. PMID: 32341405.
Metabolic control analysis of hepatic glycogen synthesis in vivo.Nozaki Y, Petersen MC, Zhang D, Vatner DF, Perry RJ, Abulizi A, Haedersdal S, Zhang XM, Butrico GM, Samuel VT, Mason GF, Cline GW, Petersen KF, Rothman DL, Shulman GI. Proc Natl Acad Sci U S A. 2020 Apr 7; 2020 Mar 18. PMID: 32188779.
Hemodynamic impairments within individual watershed areas in asymptomatic carotid artery stenosis by multimodal MRI.Kaczmarz S, Göttler J, Petr J, Hansen MB, Mouridsen K, Zimmer C, Hyder F, Preibisch C. J Cereb Blood Flow Metab. 2020 Apr 1; 2020 Apr 1. PMID: 32237952.
Characterizing white matter fiber orientation effects on multi-parametric quantitative BOLD assessment of oxygen extraction fraction.Kaczmarz S, Göttler J, Zimmer C, Hyder F, Preibisch C. J Cereb Blood Flow Metab. 2020 Apr; 2019 Apr 5. PMID: 30952200.
Transverse myelitis following measles vaccination in a rhesus macaque (Macaca mulatta).Sarfaty AE, Fulbright RK, Compton SR, Asher JL, Zeiss CJ. J Med Primatol. 2020 Apr; 2019 Dec 2. PMID: 31789460.
Kaempferol Treatment after Traumatic Brain Injury during Early Development Mitigates Brain Parenchymal Microstructure and Neural Functional Connectivity Deterioration at Adolescence.Parent M, Chitturi J, Santhakumar V, Hyder F, Sanganahalli BG, Kannurpatti SS. J Neurotrauma. 2020 Apr 1; 2020 Feb 6. PMID: 31830867.
Cluster failure or power failure? Evaluating sensitivity in cluster-level inference.Noble S, Scheinost D, Constable RT. Neuroimage. 2020 Apr 1; 2019 Dec 15. PMID: 31852625.
Regions and Connections: Complementary Approaches to Characterize Brain Organization and Function.Horien C, Greene AS, Constable RT, Scheinost D. Neuroscientist. 2020 Apr; 2019 Jul 14. PMID: 31304866.
Craving to Quit: A Randomized Controlled Trial of Smartphone App-Based Mindfulness Training for Smoking Cessation.Garrison KA, Pal P, O'Malley SS, Pittman BP, Gueorguieva R, Rojiani R, Scheinost D, Dallery J, Brewer JA. Nicotine Tob Res. 2020 Mar 16. PMID: 29917096.
The Application of Connectome-Based Predictive Modeling to the Maternal Brain: Implications for Mother-Infant Bonding.Rutherford HJV, Potenza MN, Mayes LC, Scheinost D. Cereb Cortex. 2020 Mar 14. PMID: 31690936.
There is no single functional atlas even for a single individual: Functional parcel definitions change with task.Salehi M, Greene AS, Karbasi A, Shen X, Scheinost D, Constable RT. Neuroimage. 2020 Mar; 2019 Nov 15. PMID: 31740342.
On the magnetic field dependence of deuterium metabolic imaging.de Graaf RA, Hendriks AD, Klomp DWJ, Kumaragamage C, Welting D, Arteaga de Castro CS, Brown PB, McIntyre S, Nixon TW, Prompers JJ, De Feyter HM. NMR Biomed. 2020 Mar; 2019 Dec 26. PMID: 31879985.
Functional connectivity predicts changes in attention observed across minutes, days, and months.Rosenberg MD, Scheinost D, Greene AS, Avery EW, Kwon YH, Finn ES, Ramani R, Qiu M, Constable RT, Chun MM. Proc Natl Acad Sci U S A. 2020 Feb 18; 2020 Feb 4. PMID: 32019892.
Hippocampal Pathology in Clinical High-Risk Patients and the Onset of Schizophrenia.Provenzano FA, Guo J, Wall MM, Feng X, Sigmon HC, Brucato G, First MB, Rothman DL, Girgis RR, Lieberman JA, Small SA. Biol Psychiatry. 2020 Feb 1; 2019 Oct 3. PMID: 31771861.
Distributed Patterns of Functional Connectivity Predict Working Memory Performance in Novel Healthy and Memory-impaired Individuals.Avery EW, Yoo K, Rosenberg MD, Greene AS, Gao S, Na DL, Scheinost D, Constable TR, Chun MM. J Cogn Neurosci. 2020 Feb; 2019 Oct 29. PMID: 31659926.
Individualized functional networks reconfigure with cognitive state.Salehi M, Karbasi A, Barron DS, Scheinost D, Constable RT. Neuroimage. 2020 Feb 1; 2019 Sep 28. PMID: 31574322.
Molecular Imaging of Extracellular Tumor pH to Reveal Effects of Locoregional Therapy on Liver Cancer Microenvironment.Savic LJ, Schobert IT, Peters D, Walsh JJ, Laage-Gaupp FM, Hamm CA, Tritz N, Doemel LA, Lin M, Sinusas A, Schlachter T, Duncan JS, Hyder F, Coman D, Chapiro J. Clin Cancer Res. 2020 Jan 15; 2019 Oct 3. PMID: 31582517.
Differential Resting State Connectivity Responses to Glycemic State in Type 1 Diabetes.Parikh L, Seo D, Lacadie C, Belfort-Deaguiar R, Groskreutz D, Hamza M, Dai F, Scheinost D, Sinha R, Todd Constable R, Sherwin R, Hwang JJ. J Clin Endocrinol Metab. 2020 Jan 1. PMID: 31511876.
Dynamic Thermal Mapping of Localized Therapeutic Hypothermia in the Brain.Walsh JJ, Huang Y, Simmons JW, Goodrich JA, McHugh B, Rothman DL, Elefteriades JA, Hyder F, Coman D. J Neurotrauma. 2020 Jan 1; 2019 Aug 22. PMID: 31311414.
Prognosticating brain tumor patient survival after laser thermotherapy: Comparison between neuroradiological reading and semi-quantitative analysis of MRI data.Hanna JM, Temares D, Hyder F, Rothman DL, Fulbright RK, Chiang VL, Coman D. Magn Reson Imaging. 2020 Jan; 2019 Oct 29. PMID: 31675529.
Simultaneous mesoscopic and two-photon imaging of neuronal activity in cortical circuits.Barson D, Hamodi AS, Shen X, Lur G, Constable RT, Cardin JA, Crair MC, Higley MJ. Nat Methods. 2020 Jan; 2019 Nov 4. PMID: 31686040.
Leptomeningeal dissemination of low-grade neuroepithelial CNS tumors in adults: a 15-year experience.Karschnia P, Barbiero FJ, Schwaiblmair MH, Kaulen LD, Piepmeier JM, Huttner AJ, Becker KP, Fulbright RK, Baehring JM. Neurooncol Pract. 2020 Jan; 2019 Jul 6. PMID: 32257290.

2019

Prefrontal Cortical and Behavioral Adaptations to Surgical Delivery Mediated by Metabolic Principles.Taylor-Giorlando M, Scheinost D, Ment L, Rothman D, Horvath TL. Cereb Cortex. 2019 Dec 17. PMID: 30877804.
A decade of test-retest reliability of functional connectivity: A systematic review and meta-analysis.Noble S, Scheinost D, Constable RT. Neuroimage. 2019 Dec; 2019 Sep 5. PMID: 31494250.
Image processing and analysis methods for the Adolescent Brain Cognitive Development Study.Hagler DJ Jr, Hatton S, Cornejo MD, Makowski C, Fair DA, Dick AS, Sutherland MT, Casey BJ, Barch DM, Harms MP, Watts R, Bjork JM, Garavan HP, Hilmer L, Pung CJ, Sicat CS, Kuperman J, Bartsch H, Xue F, Heitzeg MM, Laird AR, Trinh TT, Gonzalez R, Tapert SF, Riedel MC, Squeglia LM, Hyde LW, Rosenberg MD, Earl EA, Howlett KD, Baker FC, Soules M, Diaz J, de Leon OR, Thompson WK, Neale MC, Herting M, Sowell ER, Alvarez RP, Hawes SW, Sanchez M, Bodurka J, Breslin FJ, Morris AS, Paulus MP, Simmons WK, Polimeni JR, van der Kouwe A, Nencka AS, Gray KM, Pierpaoli C, Matochik JA, Noronha A, Aklin WM, Conway K, Glantz M, Hoffman E, Little R, Lopez M, Pariyadath V, Weiss SR, Wolff-Hughes DL, DelCarmen-Wiggins R, Feldstein Ewing SW, Miranda-Dominguez O, Nagel BJ, Perrone AJ, Sturgeon DT, Goldstone A, Pfefferbaum A, Pohl KM, Prouty D, Uban K, Bookheimer SY, Dapretto M, Galvan A, Bagot K, Giedd J, Infante MA, Jacobus J, Patrick K, Shilling PD, Desikan R, Li Y, Sugrue L, Banich MT, Friedman N, Hewitt JK, Hopfer C, Sakai J, Tanabe J, Cottler LB, Nixon SJ, Chang L, Cloak C, Ernst T, Reeves G, Kennedy DN, Heeringa S, Peltier S, Schulenberg J, Sripada C, Zucker RA, Iacono WG, Luciana M, Calabro FJ, Clark DB, Lewis DA, Luna B, Schirda C, Brima T, Foxe JJ, Freedman EG, Mruzek DW, Mason MJ, Huber R, McGlade E, Prescot A, Renshaw PF, Yurgelun-Todd DA, Allgaier NA, Dumas JA, Ivanova M, Potter A, Florsheim P, Larson C, Lisdahl K, Charness ME, Fuemmeler B, Hettema JM, Maes HH, Steinberg J, Anokhin AP, Glaser P, Heath AC, Madden PA, Baskin-Sommers A, Constable RT, Grant SJ, Dowling GJ, Brown SA, Jernigan TL, Dale AM. Neuroimage. 2019 Nov 15; 2019 Aug 12. PMID: 31415884.
Dissociable neural substrates of opioid and cocaine use identified via connectome-based modelling.Lichenstein SD, Scheinost D, Potenza MN, Carroll KM, Yip SW. Mol Psychiatry. 2019 Nov 12; 2019 Nov 12. PMID: 31719641.
Design of Gadoteridol-Loaded Cationic Liposomal Adjuvant CAF01 for MRI of Lung Deposition of Intrapulmonary Administered Particles.Thakur A, Rose F, Ansari SR, Koch P, Martini V, Ovesen SL, Quistorff B, Maritim S, Hyder F, Andersen P, Christensen D, Mori Y, Foged C. Mol Pharm. 2019 Nov 4; 2019 Oct 3. PMID: 31539263.
A homozygous variant in RRM2B is associated with severe metabolic acidosis and early neonatal death.Penque BA, Su L, Wang J, Ji W, Bale A, Luh F, Fulbright RK, Sarmast U, Sega AG, Konstantino M, Spencer-Manzon M, Pierce R, Yen Y, Lakhani SA. Eur J Med Genet. 2019 Nov; 2018 Nov 12. PMID: 30439532.
Flow-metabolism uncoupling in patients with asymptomatic unilateral carotid artery stenosis assessed by multi-modal magnetic resonance imaging.Göttler J, Kaczmarz S, Kallmayer M, Wustrow I, Eckstein HH, Zimmer C, Sorg C, Preibisch C, Hyder F. J Cereb Blood Flow Metab. 2019 Nov; 2018 Jul 3. PMID: 29968499.
Engineering of human brain organoids with a functional vascular-like system.Cakir B, Xiang Y, Tanaka Y, Kural MH, Parent M, Kang YJ, Chapeton K, Patterson B, Yuan Y, He CS, Raredon MSB, Dengelegi J, Kim KY, Sun P, Zhong M, Lee S, Patra P, Hyder F, Niklason LE, Lee SH, Yoon YS, Park IH. Nat Methods. 2019 Nov; 2019 Oct 7. PMID: 31591580.
Combining multiple connectomes improves predictive modeling of phenotypic measures.Gao S, Greene AS, Constable RT, Scheinost D. Neuroimage. 2019 Nov 1; 2019 Jul 20. PMID: 31336188.
Glutaminase activity in GLS1 Het mouse brain compared to putative pharmacological inhibition by ebselen using ex vivo MRS.Kosten L, Chowdhury GMI, Mingote S, Staelens S, Rothman DL, Behar KL, Rayport S. Neurochem Int. 2019 Oct; 2019 Jul 19. PMID: 31326460.
In vivo ¹³ C and ¹ H-[¹³ C] MRS studies of neuroenergetics and neurotransmitter cycling, applications to neurological and psychiatric disease and brain cancer.Rothman DL, de Graaf RA, Hyder F, Mason GF, Behar KL, De Feyter HM. NMR Biomed. 2019 Oct; 2019 Sep 2. PMID: 31478594.
Dynamic-flip-angle ECG-gating with nuisance signal regression improves resting-state BOLD functional connectivity mapping by reducing cardiogenic noise.Hu C, Tokoglu F, Scheinost D, Qiu M, Shen X, Peters DC, Galiana G, Constable RT. Magn Reson Med. 2019 Sep; 2019 Apr 24. PMID: 31016782.
The Functional Brain Organization of an Individual Allows Prediction of Measures of Social Abilities Transdiagnostically in Autism and Attention-Deficit/Hyperactivity Disorder.Lake EMR, Finn ES, Noble SM, Vanderwal T, Shen X, Rosenberg MD, Spann MN, Chun MM, Scheinost D, Constable RT. Biol Psychiatry. 2019 Aug 15; 2019 Mar 7. PMID: 31010580.
Multivariate approaches improve the reliability and validity of functional connectivity and prediction of individual behaviors.Yoo K, Rosenberg MD, Noble S, Scheinost D, Constable RT, Chun MM. Neuroimage. 2019 Aug 15; 2019 Apr 27. PMID: 31039408.
Strength of resting state functional connectivity and local GABA concentrations predict oral reading of real and pseudo-words.Krishnamurthy LC, Krishnamurthy V, Crosson B, Rothman DL, Schwam DM, Greenberg D, Pugh KR, Morris RD. Sci Rep. 2019 Aug 6; 2019 Aug 6. PMID: 31388067.
An information network flow approach for measuring functional connectivity and predicting behavior.Kumar S, Yoo K, Rosenberg MD, Scheinost D, Constable RT, Zhang S, Li CR, Chun MM. Brain Behav. 2019 Aug; 2019 Jul 9. PMID: 31286688.
DNMT3A co-mutation in an IDH1-mutant glioblastoma.Fomchenko EI, Erson-Omay EZ, Zhao A, Bindra RS, Huttner A, Fulbright RK, Moliterno J. Cold Spring Harb Mol Case Stud. 2019 Aug; 2019 Aug 1. PMID: 31371348.
Prognostic markers for immunodeficiency-associated primary central nervous system lymphoma.Kaulen LD, Galluzzo D, Hui P, Barbiero F, Karschnia P, Huttner A, Fulbright R, Baehring JM. J Neurooncol. 2019 Aug; 2019 Jun 13. PMID: 31190317.
Extent of resection of epidermoid tumors and risk of recurrence: case report and meta-analysis.Shear BM, Jin L, Zhang Y, David WB, Fomchenko EI, Erson-Omay EZ, Huttner A, Fulbright RK, Moliterno J. J Neurosurg. 2019 Jul 5; 2019 Jul 5. PMID: 31277071.
Noninvasive In Vivo Quantification of Adeno-Associated Virus Serotype 9-Mediated Expression of the Sodium/Iodide Symporter Under Hindlimb Ischemia and Neuraminidase Desialylation in Skeletal Muscle Using Single-Photon Emission Computed Tomography/Computed Tomography.Boutagy NE, Ravera S, Papademetris X, Onofrey JA, Zhuang ZW, Wu J, Feher A, Stacy MR, French BA, Annex BH, Carrasco N, Sinusas AJ. Circ Cardiovasc Imaging. 2019 Jul; 2019 Jul 12. PMID: 31296047.
Left atrial fibrosis correlates with extent of left ventricular myocardial delayed enhancement and left ventricular strain in hypertrophic cardiomyopathy.Latif SR, Nguyen VQ, Peters DC, Soufer A, Henry ML, Grunseich K, Testani J, Hur DJ, Huber S, Mojibian H, Dicks D, Sinusas AJ, Meadows JL, Papoutsidakis N, Jacoby D, Baldassarre LA. Int J Cardiovasc Imaging. 2019 Jul; 2019 Feb 21. PMID: 30790116.
Effect of deactivation of activity patterns related to smoking cue reactivity on nicotine addiction.Bu J, Young KD, Hong W, Ma R, Song H, Wang Y, Zhang W, Hampson M, Hendler T, Zhang X. Brain. 2019 Jun 1. PMID: 31135053.
What is the Functional Difference Between Sagittal With Metopic and Isolated Sagittal Craniosynotosis?Cabrejo R, Lacadie C, Chuang C, Yang J, Sun A, Brooks E, Beckett J, Eilbott J, Gabrick K, Steinbacher D, Alperovich M, Pelphrey K, Ventola P, Constable T, Persing JA. J Craniofac Surg. 2019 Jun. PMID: 30882572.
SUPER: A blockwise curve-fitting method for accelerating MR parametric mapping with fast reconstruction.Hu C, Peters DC. Magn Reson Med. 2019 Jun; 2019 Jan 17. PMID: 30656730.
Imaging Biomarkers of the Neuroimmune System among Substance Use Disorders: A Systematic Review.Woodcock EA, Hillmer AT, Mason GF, Cosgrove KP. Mol Neuropsychiatry. 2019 Jun; 2019 May 9. PMID: 31312635.
Ten simple rules for predictive modeling of individual differences in neuroimaging.Scheinost D, Noble S, Horien C, Greene AS, Lake EM, Salehi M, Gao S, Shen X, O'Connor D, Barron DS, Yip SW, Rosenberg MD, Constable RT. Neuroimage. 2019 Jun; 2019 Mar 1. PMID: 30831310.
FDG PET imaging of vascular inflammation in post-traumatic stress disorder: A pilot case-control study.Toczek J, Hillmer AT, Han J, Liu C, Peters D, Emami H, Wu J, Esterlis I, Cosgrove KP, Sadeghi MM. J Nucl Cardiol. 2019 May 9; 2019 May 9. PMID: 31073848.
Lower synaptic density is associated with depression severity and network alterations.Holmes SE, Scheinost D, Finnema SJ, Naganawa M, Davis MT, DellaGioia N, Nabulsi N, Matuskey D, Angarita GA, Pietrzak RH, Duman RS, Sanacora G, Krystal JH, Carson RE, Esterlis I. Nat Commun. 2019 Apr 4; 2019 Apr 4. PMID: 30948709.
Glymphatic System Function in Relation to Anesthesia and Sleep States.Benveniste H, Heerdt PM, Fontes M, Rothman DL, Volkow ND. Anesth Analg. 2019 Apr. PMID: 30883420.
The individual functional connectome is unique and stable over months to years.Horien C, Shen X, Scheinost D, Constable RT. Neuroimage. 2019 Apr 1; 2019 Feb 2. PMID: 30721751.
GENERALIZABLE MULTI-SITE TRAINING AND TESTING OF DEEP NEURAL NETWORKS USING IMAGE NORMALIZATION.Onofrey JA, Casetti-Dinescu DI, Lauritzen AD, Sarkar S, Venkataraman R, Fan RE, Sonn GA, Sprenkle PC, Staib LH, Papademetris X. Proc IEEE Int Symp Biomed Imaging. 2019 Apr; 2019 Jul 11. PMID: 32874427.

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