2021
Airway microbiome dynamics and relationship to ventilator‐associated infection in intubated pediatric patients
Tarquinio KM, Karsies T, Shein SL, Beardsley A, Khemani R, Schwarz A, Smith L, Flori H, Karam O, Cao Q, Haider Z, Smirnova E, Serrano MG, Buck GA, Willson DF. Airway microbiome dynamics and relationship to ventilator‐associated infection in intubated pediatric patients. Pediatric Pulmonology 2021, 57: 508-518. PMID: 34811963, PMCID: PMC8809006, DOI: 10.1002/ppul.25769.Peer-Reviewed Original ResearchConceptsVentilator-associated infectionDays of intubationAirway microbiomeSerial tracheal aspirate samplesPediatric intensive care unitIntensive care unitIntubated pediatric patientsTracheal aspirate samplesTracheal microbiomePediatric patientsCare unitClinical parametersIntubation periodClinical variablesAntibiotic treatmentVentilated subjectsAspirate samplesInfection scoreMedian numberSubject demographicsPorphyromonadaceae familyMicrobiome patternsIntubationVeillonella atypicaPatients
2020
Altered Composition of Gut Microbiota in Depression: A Systematic Review
Barandouzi Z, Starkweather A, Henderson W, Gyamfi A, Cong X. Altered Composition of Gut Microbiota in Depression: A Systematic Review. Frontiers In Psychiatry 2020, 11: 541. PMID: 32587537, PMCID: PMC7299157, DOI: 10.3389/fpsyt.2020.00541.Peer-Reviewed Original ResearchGut microbiota patternMicrobiota patternsComposition of gut microbiotaLow abundanceClostridium IV</i>Clostridium XlVa</i>Gut microbiome patternsBrain-gut-microbiome axisGenus levelGut microbiotaB-diversityGut microbiomePhylum levelA-diversityMicrobiome patternsGastrointestinal microbiomeFamily levelMicrobiome findingsMicrobiotaAltered compositionAbundanceGutHealthy controlsMicrobiomeDepressive disorder
2016
Gut Microbiome Developmental Patterns in Early Life of Preterm Infants: Impacts of Feeding and Gender
Cong X, Xu W, Janton S, Henderson W, Matson A, McGrath J, Maas K, Graf J. Gut Microbiome Developmental Patterns in Early Life of Preterm Infants: Impacts of Feeding and Gender. PLOS ONE 2016, 11: e0152751. PMID: 27111847, PMCID: PMC4844123, DOI: 10.1371/journal.pone.0152751.Peer-Reviewed Original ResearchConceptsOperational taxonomic unitsGut microbiomeA-diversityGut microbiotaNeonatal intensive care unitPreterm infantsPatterns of gut microbiomeDiversity of gut microbiomeRRNA gene regionInfant gut microbiomeFeeding typeAbundance of EnterobacterialesGut microbiome patternsTaxonomic unitsAbundant phylumGene regionTotal readsAlpha diversityQIIME softwareV4 regionBacterial compositionDevelopmental patternsEarly lifeInfant's postnatal ageMicrobiome patterns
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