2022
Brain–phenotype models fail for individuals who defy sample stereotypes
Greene AS, Shen X, Noble S, Horien C, Hahn CA, Arora J, Tokoglu F, Spann MN, Carrión CI, Barron DS, Sanacora G, Srihari VH, Woods SW, Scheinost D, Constable RT. Brain–phenotype models fail for individuals who defy sample stereotypes. Nature 2022, 609: 109-118. PMID: 36002572, PMCID: PMC9433326, DOI: 10.1038/s41586-022-05118-w.Peer-Reviewed Original ResearchConceptsBrain-phenotype relationshipsBrain functional organizationCognitive constructsIndividual differencesNeurocognitive measuresBrain activityNeurocognitive scoresStereotypical profileNeural targetsClinical interventionsNeural circuitsFunctional organizationIndividualsSuch relationshipsData-driven approachRelationshipStereotypesA cognitive state transformation model for task-general and task-specific subsystems of the brain connectome
Yoo K, Rosenberg MD, Kwon YH, Scheinost D, Constable RT, Chun MM. A cognitive state transformation model for task-general and task-specific subsystems of the brain connectome. NeuroImage 2022, 257: 119279. PMID: 35577026, PMCID: PMC9307138, DOI: 10.1016/j.neuroimage.2022.119279.Peer-Reviewed Original ResearchConceptsDifferent cognitive statesCognitive stateWhole-brain functional connectomeRelevant individual differencesFunctional reorganizationFunctional magnetic resonanceResting-state dataSpecific task goalsTask-induced modulationHuman Connectome ProjectContext-dependent changesIndividual differencesTask goalsContextual demandsBehavioral predictionsCognitive behaviorFunctional connectomeConnectome ProjectBrain connectomeHuman brainBrain functional reorganizationC2C modelConnectomeBrainMemoryLarge-scale differences in functional organization of left- and right-handed individuals using whole-brain, data-driven analysis of connectivity
Tejavibulya L, Peterson H, Greene A, Gao S, Rolison M, Noble S, Scheinost D. Large-scale differences in functional organization of left- and right-handed individuals using whole-brain, data-driven analysis of connectivity. NeuroImage 2022, 252: 119040. PMID: 35272202, PMCID: PMC9013515, DOI: 10.1016/j.neuroimage.2022.119040.Peer-Reviewed Original ResearchConceptsHanded individualsFunctional connectivityLanguage areasWhole-brain functional connectivityRight-handed individualsFunctional organizationWhole-brain levelIndividual differencesHandedness differencesHandedness effectsFunctional connectomeBrain levelsSomatosensory cortexNetworks of interestWhole brainSex differencesBrainConnectomeIndividualsData-driven analysisConnectivityDistinct patternsLateralizationDifferencesSimilar amounts
2021
Functional connectivity during frustration: a preliminary study of predictive modeling of irritability in youth
Scheinost D, Dadashkarimi J, Finn ES, Wambach CG, MacGillivray C, Roule AL, Niendam TA, Pine DS, Brotman MA, Leibenluft E, Tseng WL. Functional connectivity during frustration: a preliminary study of predictive modeling of irritability in youth. Neuropsychopharmacology 2021, 46: 1300-1306. PMID: 33479511, PMCID: PMC8134471, DOI: 10.1038/s41386-020-00954-8.Peer-Reviewed Original ResearchConceptsFunctional connectivityAttention-deficit/hyperactivity disorderCognitive flexibility taskDisruptive mood dysregulation disorderAffective Reactivity IndexLevels of irritabilityPreliminary fMRI studyCognitive flexibilityFlexibility taskIndividual differencesTransdiagnostic sampleFrontal networkFMRI studyHyperactivity disorderTask difficultyNeural mechanismsParent reportAnxiety symptomsSalience networkAnxiety disordersFrustrative nonrewardDimensional measuresPreliminary evidenceReactivity indexChild psychiatry
2020
Transdiagnostic, Connectome-Based Prediction of Memory Constructs Across Psychiatric Disorders
Barron DS, Gao S, Dadashkarimi J, Greene AS, Spann MN, Noble S, Lake EMR, Krystal JH, Constable RT, Scheinost D. Transdiagnostic, Connectome-Based Prediction of Memory Constructs Across Psychiatric Disorders. Cerebral Cortex 2020, 31: 2523-2533. PMID: 33345271, PMCID: PMC8023861, DOI: 10.1093/cercor/bhaa371.Peer-Reviewed Original ResearchConceptsMacroscale brain networksIndividual differencesBrain networksMemory deficitsFunctional connectivityAttention deficit hyper-activity disorderTask-based functional MRI dataLong-term memoryWhole-brain functional connectivityDiagnostic groupsWhole-brain patternsDefault mode networkFunctional MRI dataHuman Connectome ProjectPsychiatric disordersMemory constructsMemory performanceTransdiagnostic sampleBrain correlatesMode networkFunctional connectomeConnectome ProjectLimbic networkHealthy participantsMemoryBehavioral and brain signatures of substance use vulnerability in childhood
Rapuano KM, Rosenberg MD, Maza MT, Dennis NJ, Dorji M, Greene AS, Horien C, Scheinost D, Constable R, Casey BJ. Behavioral and brain signatures of substance use vulnerability in childhood. Developmental Cognitive Neuroscience 2020, 46: 100878. PMID: 33181393, PMCID: PMC7662869, DOI: 10.1016/j.dcn.2020.100878.Peer-Reviewed Original ResearchConceptsConnectome-based predictive modelingSubstance useFunctional connectivityCognitive Development StudyFuture substance useSubstance use vulnerabilityAdolescent substance useSubstance use increasesSubstance use outcomesIndividual differencesAdolescent brainBrain signaturesTask conditionsBehavioral measuresFamilial risk factorsUse outcomesRisky behaviorsLatent dimensionsFamilial factorsBrain modelCurrent studyWeak predictorDevelopment studiesEarly susceptibilityFunctional imagingFunctional connectivity predicts changes in attention observed across minutes, days, and months
Rosenberg MD, Scheinost D, Greene AS, Avery EW, Kwon YH, Finn ES, Ramani R, Qiu M, Constable RT, Chun MM. Functional connectivity predicts changes in attention observed across minutes, days, and months. Proceedings Of The National Academy Of Sciences Of The United States Of America 2020, 117: 3797-3807. PMID: 32019892, PMCID: PMC7035597, DOI: 10.1073/pnas.1912226117.Peer-Reviewed Original ResearchConceptsConnectome-based predictive modelsAttentional stateSustained attentionIndividual differencesSustained attention functionFunctional connectivity signaturesFunctional brain connectivityFunctional connectivity patternsAttention functionConnectivity signaturesFunctional connectivityBrain connectivityConnectivity patternsAttentionSingle personSame patternIndividualsConnectivityIndependent studiesRecent workState changesPersonsPeopleDifferencesAbilityDistributed Patterns of Functional Connectivity Predict Working Memory Performance in Novel Healthy and Memory-impaired Individuals
Avery EW, Yoo K, Rosenberg MD, Greene AS, Gao S, Na DL, Scheinost D, Constable TR, Chun MM. Distributed Patterns of Functional Connectivity Predict Working Memory Performance in Novel Healthy and Memory-impaired Individuals. Journal Of Cognitive Neuroscience 2020, 32: 241-255. PMID: 31659926, PMCID: PMC8004893, DOI: 10.1162/jocn_a_01487.Peer-Reviewed Original ResearchConceptsFunctional connectivity patternsFluid intelligenceMemory performanceIndividual differencesAttention modelConnectome-based predictive modelingConnectome-based predictive modelsWhole-brain functional connectivity patternsGeneral cognitive abilitySuch individual differencesConnectivity patternsAdult life spanHuman Connectome ProjectHuman Connectome Project dataMemory relateCognitive abilitiesNeural basisSustained attentionMemory scoresParietal regionsFunctional connectivityConnectome ProjectMemory modelOlder adultsMemory
2019
Toward Addiction Prediction: An Overview of Cross-Validated Predictive Modeling Findings and Considerations for Future Neuroimaging Research
Yip SW, Kiluk B, Scheinost D. Toward Addiction Prediction: An Overview of Cross-Validated Predictive Modeling Findings and Considerations for Future Neuroimaging Research. Biological Psychiatry Cognitive Neuroscience And Neuroimaging 2019, 5: 748-758. PMID: 31932230, PMCID: PMC8274215, DOI: 10.1016/j.bpsc.2019.11.001.Peer-Reviewed Original ResearchConceptsIndividual differencesBrain-behavior modelsFuture neuroimaging researchLikelihood of replicationEvidence-based treatmentsNeuroimaging researchEffect size estimatesSubstance useDirection of associationAnatomical locusBrain functionTreatment outcomesModeling findingsClinical samplesNovel subjectRelapse rateClinical outcomesPredictive modeling approachUnsuccessful treatmentLeading causeIndividualsClinical settingParticular riskSize estimatesOutcomesAn information network flow approach for measuring functional connectivity and predicting behavior
Kumar S, Yoo K, Rosenberg MD, Scheinost D, Constable RT, Zhang S, Li C, Chun MM. An information network flow approach for measuring functional connectivity and predicting behavior. Brain And Behavior 2019, 9: e01346. PMID: 31286688, PMCID: PMC6710195, DOI: 10.1002/brb3.1346.Peer-Reviewed Original ResearchConceptsFunctional brain connectivityFunctional magnetic resonance imagingFMRI time coursesIndividual differencesTask performanceMeasures of attentionSustained attention taskAttention task performanceResting-state fMRI dataSample of individualsAttention taskFMRI dataFunctional connectivityFC patternsBrain connectivityPearson correlationInformation theory statisticsInformation flowMachine-learning modelsMeasuresMagnetic resonance imagingAttentionNetwork flow approachTime courseDifferent datasetsMultivariate approaches improve the reliability and validity of functional connectivity and prediction of individual behaviors
Yoo K, Rosenberg MD, Noble S, Scheinost D, Constable RT, Chun MM. Multivariate approaches improve the reliability and validity of functional connectivity and prediction of individual behaviors. NeuroImage 2019, 197: 212-223. PMID: 31039408, PMCID: PMC6591084, DOI: 10.1016/j.neuroimage.2019.04.060.Peer-Reviewed Original ResearchConceptsFunctional brain organizationFunctional connectivityFunctional connectivity featuresTest-retest sampleMultivariate functional connectivityCognitive skillsMental representationsIndividual differencesFMRI measuresBrain organizationBrain statesStrong predictionSpatial activity patternsFMRI datasetsConnectivity featuresIndividual behaviorProject samplesConnectivity estimatesTimecoursesActivity patternsCognitionPearson correlationIndividualsConnectivityUnivariate approachThe individual functional connectome is unique and stable over months to years
Horien C, Shen X, Scheinost D, Constable RT. The individual functional connectome is unique and stable over months to years. NeuroImage 2019, 189: 676-687. PMID: 30721751, PMCID: PMC6422733, DOI: 10.1016/j.neuroimage.2019.02.002.Peer-Reviewed Original ResearchConceptsHigh ID ratesIndividual differencesFunctional connectomeIndividual functional connectomesStable individual differencesID rateResting-state fMRI datasetsFrontoparietal networkFunctional connectivityParietal cortexFMRI datasetsIdiosyncratic aspectsConnectomeHead motionEntire brainFMRIBrainCortexSpecific datasetDifferencesConnectivityConnectome-Based Prediction of Cocaine Abstinence
Yip SW, Scheinost D, Potenza MN, Carroll KM. Connectome-Based Prediction of Cocaine Abstinence. American Journal Of Psychiatry 2019, 176: 156-164. PMID: 30606049, PMCID: PMC6481181, DOI: 10.1176/appi.ajp.2018.17101147.Peer-Reviewed Original ResearchMeSH KeywordsAdultBehavior TherapyBrainCholinesterase InhibitorsCocaine-Related DisordersCognitionConnectomeExecutive FunctionFemaleFunctional NeuroimagingGalantamineHumansIndividualityMachine LearningMagnetic Resonance ImagingMaleMiddle AgedNeural PathwaysOpiate Substitution TreatmentOpioid-Related DisordersPrognosisRewardTreatment OutcomeConceptsConnectome-based predictive modelingCocaine use disorderUse disordersBrain-based predictorsLarge-scale neural networksFunctional MRI dataCocaine abstinenceExecutive controlReward responsivenessIndividual differencesBaseline cocaine usePosttreatment assessmentConnectivity strengthHeterogeneous sampleAbstinenceIndependent samplesNovel interventionsCanonical networksSpecific behaviorsCocaine useSignificant correspondenceDisordersTreatment outcomesNetwork strengthMRI data
2018
Dynamic functional connectivity during task performance and rest predicts individual differences in attention across studies
Fong AHC, Yoo K, Rosenberg MD, Zhang S, Li CR, Scheinost D, Constable RT, Chun MM. Dynamic functional connectivity during task performance and rest predicts individual differences in attention across studies. NeuroImage 2018, 188: 14-25. PMID: 30521950, PMCID: PMC6401236, DOI: 10.1016/j.neuroimage.2018.11.057.Peer-Reviewed Original ResearchConceptsAttention task performanceDynamic functional connectivityTask performanceIndividual differencesExecutive control brain networksFunctional connectivityFunctional brain scansAttention performanceTask conditionsAttention scoresBrain networksFMRI dataBrain regionsBetter attentionFC featuresFC matricesDFC matrixPearson's rAttentionIndividualsOne-subjectBrain scansConnectivityConnectomeCross-validation approachTask-induced brain state manipulation improves prediction of individual traits
Greene AS, Gao S, Scheinost D, Constable RT. Task-induced brain state manipulation improves prediction of individual traits. Nature Communications 2018, 9: 2807. PMID: 30022026, PMCID: PMC6052101, DOI: 10.1038/s41467-018-04920-3.Peer-Reviewed Original ResearchConceptsBrain statesIndividual differencesBrain-behavior relationshipsFluid intelligence scoresTask-based functional connectivity analysisResting-state fMRI dataBrain functional organizationFunctional connectivity analysisCognitive tasksFluid intelligenceIntelligence scoresFunctional connectivityFMRI dataConnectivity analysisHuman behaviorIndividual traitsTaskCertain tasksFunctional organizationOutperform modelsSuch relationshipsCognitionState manipulationIntelligenceVariance
2017
Can brain state be manipulated to emphasize individual differences in functional connectivity?
Finn ES, Scheinost D, Finn DM, Shen X, Papademetris X, Constable RT. Can brain state be manipulated to emphasize individual differences in functional connectivity? NeuroImage 2017, 160: 140-151. PMID: 28373122, PMCID: PMC8808247, DOI: 10.1016/j.neuroimage.2017.03.064.Peer-Reviewed Original ResearchConceptsIndividual differencesFunctional connectivityBrain statesIndividual differences researchBrain functional organizationHuman Connectome ProjectDifferences researchBrain activityConnectome ProjectSubject variabilityNetworks of interestBehavioral phenotypesCertain tasksFunctional organizationDefault stateNeutral backdropOutline questionsFuture studiesConnectivityTask