2025
Evaluating the Bias, type I error and statistical power of the prior Knowledge-Guided integrated likelihood estimation (PIE) for bias reduction in EHR based association studies
Jing N, Lu Y, Tong J, Weaver J, Ryan P, Xu H, Chen Y. Evaluating the Bias, type I error and statistical power of the prior Knowledge-Guided integrated likelihood estimation (PIE) for bias reduction in EHR based association studies. Journal Of Biomedical Informatics 2025, 163: 104787. PMID: 39904407, PMCID: PMC12180398, DOI: 10.1016/j.jbi.2025.104787.Peer-Reviewed Original ResearchConceptsType I errorIntegrated likelihood estimatorsElectronic health recordsUse-case analysisLikelihood estimationLow prevalence outcomesUse-casesBias reductionNaive methodEffect sizeSynthetic dataPhenotyping algorithmsEstimation biasReal-world scenariosStatistical inferenceSimulation studyAssociation effect sizesAccurate prior informationBinary outcomesPoint estimatesAssociation estimatesStatistical powerHealth recordsKnowledge-guidedOutcome prevalenceAssociations of Genetically Predicted NPR3 and NPR2 Perturbation and Preeclampsia Risk: A Two‐Sample Mendelian Randomization Analysis
de La Harpe R, Rogne T, Nyberg M, Cronjé H, Burgess S, Karhunen V, Gill D. Associations of Genetically Predicted NPR3 and NPR2 Perturbation and Preeclampsia Risk: A Two‐Sample Mendelian Randomization Analysis. International Journal Of Hypertension 2025, 2025: 9972031. PMID: 40406480, PMCID: PMC12097871, DOI: 10.1155/ijhy/9972031.Peer-Reviewed Original ResearchGenome-wide association studiesMendelian randomizationTwo-sample Mendelian randomization analysisRisk of preeclampsiaTwo-sample MR analysisGenetic association estimatesGenetic instrumental variablesPreeclampsia riskMendelian randomization analysisFemale participantsC-type natriuretic peptideIndividual-level dataEffects of C-type natriuretic peptideGenetic instrumentsMR analysisUK BiobankRandomization analysisAssociation estimatesMR paradigmAssociation studiesGenetic variantsPregnancy complicationsProtective effects of C-type natriuretic peptideTwo-sampleInstrumental variables
2024
To weight or not to weight? The effect of selection bias in 3 large electronic health record-linked biobanks and recommendations for practice
Salvatore M, Kundu R, Shi X, Friese C, Lee S, Fritsche L, Mondul A, Hanauer D, Pearce C, Mukherjee B. To weight or not to weight? The effect of selection bias in 3 large electronic health record-linked biobanks and recommendations for practice. Journal Of The American Medical Informatics Association 2024, 31: 1479-1492. PMID: 38742457, PMCID: PMC11187425, DOI: 10.1093/jamia/ocae098.Peer-Reviewed Original ResearchEHR-linked biobanksNational Health Interview Survey dataHealth Interview Survey dataPhenome-wide association studyMichigan Genomics InitiativeElectronic health record-linked biobankTarget populationInterview Survey dataColorectal cancerUS adult populationSelection biasUK BiobankAssociation estimatesBiobank dataRecruitment strategiesEffect of selection biasICD codesLog odds ratioUKBSelection weightsEffect sizeAssociation studiesAdult populationBiobankImpact prevalence
2022
The Isocaloric Substitution of Plant-Based and Animal-Based Protein in Relation to Aging-Related Health Outcomes: A Systematic Review
Zheng J, Zhu T, Yang G, Zhao L, Li F, Park Y, Tabung F, Steck S, Li X, Wang H. The Isocaloric Substitution of Plant-Based and Animal-Based Protein in Relation to Aging-Related Health Outcomes: A Systematic Review. Nutrients 2022, 14: 272. PMID: 35057453, PMCID: PMC8781188, DOI: 10.3390/nu14020272.Peer-Reviewed Original ResearchConceptsAging-related health outcomesHealth outcomesAll-CauseInverse associationCardiovascular diseaseSystematic reviewPreventing all-causeCVD-specific mortalityCardiovascular disease mortalityEpidemiological observational studiesSignificant inverse associationCross-sectional studySubstitution of plant proteinProcessed meat proteinAnimal-based protein intakeIsocaloric substitutionCancer incidenceAssociation estimatesRed meat proteinsCohort studyConfidence intervalsObservational studyEmbase databasesAging-related diseasesPlant proteins
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