2015
Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism
Thakar J, Hartmann BM, Marjanovic N, Sealfon SC, Kleinstein SH. Comparative analysis of anti-viral transcriptomics reveals novel effects of influenza immune antagonism. BMC Immunology 2015, 16: 46. PMID: 26272204, PMCID: PMC4536893, DOI: 10.1186/s12865-015-0107-y.Peer-Reviewed Original ResearchConceptsTranscription factor activityImmune antagonismExpression profilesGenome-wide expression profilesGenome-wide transcriptional profiling dataFactor activityGenome-wide transcriptional profilesTranscription factor SATB1DNA-binding sitesTranscriptional profiling dataHost-pathogen interactionsGene expression profilesISGF3 activityTranscriptional responseTranscription factorsTranscriptional profilesHost interactionsProfiling dataApplication of betaNovel effectMechanistic insightsInfected cellsInfluenza A virusesMechanistic differencesNewcastle disease virus
2011
Prevalence of infectious bronchitis and Newcastle disease virus among domestic and wild birds in H5N1 outbreaks areas.
Tarnagda Z, Yougbare I, Kam A, Tahita M, Ouedraogo J. Prevalence of infectious bronchitis and Newcastle disease virus among domestic and wild birds in H5N1 outbreaks areas. The Journal Of Infection In Developing Countries 2011, 5: 565-70. PMID: 21841299, DOI: 10.3855/jidc.1441.Peer-Reviewed Original ResearchConceptsInfectious bronchitis virusNewcastle disease virusAvian influenza virusesPrevalence of IBVInfluenza virusDisease virusH5N1 virusBronchitis virusPrevalence of influenzaPresence of influenzaWild birdsPositive casesBurkina FasoInfectious bronchitisPrevalenceOutbreak areaVirusCloacal swabsInfluenzaTotal RNAH5N1 outbreaksAnimal healthWorld OrganisationLocal chickensSpecific primers
2010
Antiviral Response Dictated by Choreographed Cascade of Transcription Factors
Zaslavsky E, Hershberg U, Seto J, Pham AM, Marquez S, Duke JL, Wetmur JG, tenOever BR, Sealfon SC, Kleinstein SH. Antiviral Response Dictated by Choreographed Cascade of Transcription Factors. The Journal Of Immunology 2010, 184: 2908-2917. PMID: 20164420, PMCID: PMC2856074, DOI: 10.4049/jimmunol.0903453.Peer-Reviewed Original ResearchMeSH KeywordsConserved SequenceDendritic CellsGene Expression Regulation, ViralGenes, OverlappingHumansMonocytesMultigene FamilyNewcastle disease virusOligonucleotide Array Sequence AnalysisPredictive Value of TestsPromoter Regions, GeneticReproducibility of ResultsTranscription FactorsUp-RegulationConceptsCell state transitionsRegulatory networksTranscription factorsGenetic programMost individual genesNovel transcription factorSpecific transcription factorsSingle regulatory networkAntiviral responseGene expression changesCurrent biological knowledgeActivation of RIGChoreographed cascadePromoter analysisIndividual genesGenetic regulatory networksMaster regulatorExpression changesBiological knowledgeExpression kineticsImmune evasion genesAntiviral roleImmune antagonistsHost immune systemNewcastle disease virus
2009
Hepatitis C virus modulates human monocyte‐derived dendritic cells
Eksioglu E, Bess J, Zhu H, Xu Y, Dong H, Elyar J, Nelson D, Liu C. Hepatitis C virus modulates human monocyte‐derived dendritic cells. Journal Of Viral Hepatitis 2009, 17: 757-769. PMID: 20051006, PMCID: PMC3731759, DOI: 10.1111/j.1365-2893.2009.01231.x.Peer-Reviewed Original ResearchConceptsHepatitis C virusNewcastle disease virusHCV infectionC virusHuman monocyte-derived dendritic cellsViral titresMonocyte-derived dendritic cellsType 1 IFN responseFlow cytometryType 1 interferon responseMaturation of DCsDendritic cell responsesReal-time reverse transcriptase-polymerase chain reactionReverse transcriptase-polymerase chain reactionTranscriptase-polymerase chain reactionHuh-7.5 cellsDC numbersDendritic cellsImmature DCsIFNβ expressionJFH-1Control monocytesHost immunityViral evasionIFN response
1979
Structural characteristics of interferons from mouse Ehrlich ascites tumor cells.
Cabrer B, Taira H, Broeze R, Kempe T, Williams K, Slattery E, Konigsberg W, Lengyel P. Structural characteristics of interferons from mouse Ehrlich ascites tumor cells. Journal Of Biological Chemistry 1979, 254: 3681-3684. PMID: 438151, DOI: 10.1016/s0021-9258(18)50635-9.Peer-Reviewed Original ResearchConceptsAmino acidsMouse EhrlichNH2-terminal amino acidsTryptic peptide mapsSmaller speciesLarger speciesPeptide mapsSpeciesTumor cellsSize classesNewcastle disease virusDisease virusSpecific activityCellsGlycosylationProteinUnits/AcidEhrlichCarboxypeptidaseInterferonIsolationStructural characteristics
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