2023
Machine Learning of Functional Connectivity to Biotype Alcohol and Nicotine Use Disorders
Zhu T, Wang W, Chen Y, Kranzler H, Li C, Bi J. Machine Learning of Functional Connectivity to Biotype Alcohol and Nicotine Use Disorders. Biological Psychiatry Cognitive Neuroscience And Neuroimaging 2023, 9: 326-336. PMID: 37696489, PMCID: PMC10976073, DOI: 10.1016/j.bpsc.2023.08.010.Peer-Reviewed Original ResearchNicotine use disorderHealthy controlsFunctional connectivity featuresUse disordersMagnetic resonance imagingNUD subjectsVisual cortexResonance imagingClinical metricsFunctional connectivityNoninvasive toolNeural phenotypesSample of individualsMulti-task learningTransdiagnostic approachUK BiobankReplication setGenetic profileMarkersReplication sampleHighest areaDisordersDepressionAUDBody of literature
2017
Genetic Associations with Gestational Duration and Spontaneous Preterm Birth
Zhang G, Feenstra B, Bacelis J, Liu X, Muglia LM, Juodakis J, Miller DE, Litterman N, Jiang PP, Russell L, Hinds DA, Hu Y, Weirauch MT, Chen X, Chavan AR, Wagner GP, Pavličev M, Nnamani MC, Maziarz J, Karjalainen MK, Rämet M, Sengpiel V, Geller D, Boyd HA, Palotie A, Momany A, Bedell B, Ryckman KK, Huusko JM, Forney CR, Kottyan LC, Hallman M, Teramo K, Nohr EA, Davey-Smith G, Melbye M, Jacobsson B, Muglia LJ. Genetic Associations with Gestational Duration and Spontaneous Preterm Birth. New England Journal Of Medicine 2017, 377: 1156-1167. PMID: 28877031, PMCID: PMC5561422, DOI: 10.1056/nejmoa1612665.Peer-Reviewed Original ResearchMeSH KeywordsAdenylyl CyclasesDatasets as TopicFemaleGenetic Predisposition to DiseaseGenetic VariationGenome-Wide Association StudyGestational AgeHumansPeptide Elongation FactorsPhenotypePolymorphism, Single NucleotidePregnancyPremature Birthras ProteinsReceptor, Angiotensin, Type 2Regression AnalysisTrans-ActivatorsWnt4 ProteinConceptsGestational durationPreterm birthDiscovery setSpontaneous preterm birthDuration of gestationMother-infant dyadsGenomewide association studiesGenetic associationVascular controlMaternal nutritionSignificant genomewide associationEstrogen receptorPossible genetic associationDichotomous outcomesUterine developmentGenetic factorsMechanistic involvementReplication data setsAssociation studiesBirthSuggestive significanceGenomewide significanceAGTR2Replication setAssociation
2010
Susceptibility Genetic Variants Associated With Colorectal Cancer Risk Correlate With Cancer Phenotype
Abulí A, Bessa X, González JR, Ruiz–Ponte C, Cáceres A, Muñoz J, Gonzalo V, Balaguer F, Fernández–Rozadilla C, González D, de Castro L, Clofent J, Bujanda L, Cubiella J, Reñé J, Morillas JD, Lanas Á, Rigau J, García A, Latorre M, Saló J, Bañares F, Argüello L, Peña E, Vilella À, Riestra S, Carreño R, Paya A, Alenda C, Xicola RM, Doyle BJ, Jover R, Llor X, Carracedo A, Castells A, Castellví–Bel S, Andreu M, Association G. Susceptibility Genetic Variants Associated With Colorectal Cancer Risk Correlate With Cancer Phenotype. Gastroenterology 2010, 139: 788-796.e6. PMID: 20638935, DOI: 10.1053/j.gastro.2010.05.072.Peer-Reviewed Original ResearchMeSH KeywordsAgedAged, 80 and overCell DifferentiationChromosomes, Human, Pair 16Chromosomes, Human, Pair 8Colorectal NeoplasmsFemaleGene Expression Regulation, NeoplasticGene FrequencyGenetic Association StudiesGenetic Predisposition to DiseaseHumansLogistic ModelsMaleMiddle AgedNeoplasm StagingOdds RatioPedigreePhenotypePolymorphism, Single NucleotideProspective StudiesReproducibility of ResultsRisk AssessmentRisk FactorsSpainConceptsCRC phenotypeColorectal cancer riskPopulation-based cohortAdvanced stage tumorsCancer phenotypeGenetic variantsCRC managementSpanish cohortColorectal adenomasCancer riskFamilial historyG allelePatientsC alleleGenetic Variants AssociatedPrevention programsSurveillance strategiesAbstractTextLogistic regressionRisk correlatesCRCAIMSReplication setCohortVariants AssociatedVariation in Nicotinic Acetylcholine Receptor Genes is Associated with Multiple Substance Dependence Phenotypes
Sherva R, Kranzler HR, Yu Y, Logue MW, Poling J, Arias AJ, Anton RF, Oslin D, Farrer LA, Gelernter J. Variation in Nicotinic Acetylcholine Receptor Genes is Associated with Multiple Substance Dependence Phenotypes. Neuropsychopharmacology 2010, 35: 1921-1931. PMID: 20485328, PMCID: PMC3055642, DOI: 10.1038/npp.2010.64.Peer-Reviewed Original ResearchMeSH KeywordsAdultBlack or African AmericanChromosomes, Human, Pair 15Family HealthFemaleGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHumansLinkage DisequilibriumMaleMiddle AgedPhenotypePolymorphism, Single NucleotideReceptors, NicotinicSubstance-Related DisordersWhite PeopleConceptsGene clusterAssociation studiesNicotinic receptor gene clusterNicotinic acetylcholine receptor genesAcetylcholine receptor genesReceptor gene clusterStrongest association signalSubstance dependence phenotypesAssociation signalsImportance of variationChromosome 15q25.1Opposite risk allelePermutation-based correctionDependence phenotypesReplication setReceptor geneMultiple polymorphismsSNPs
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