Publications

• The readability of online patient education materials for cutaneous autoimmune connective tissue diseases.Saeed S, Gehlhausen JR, Koumpouras F, Ramachandran S. Clin Rheumatol. 2025 Feb 4; 2025 Feb 4. PMID: 39904945.
• Implementation of a Best Practice Advisory to Improve Infection Screening Prior to New Prescriptions of Biologics and Targeted Synthetic Drugs.Baker H, Fine R, Suter F, Allore H, Hsiao B, Chowdhary V, Lavelle E, Chen P, Hintz R, Suter LG, Danve A. Arthritis Care Res (Hoboken). 2025 Feb; 2023 Aug 29. PMID: 37382043.
• Decreased T helper 1 cell function underlies recurrent sinopulmonary infections in the 17q12 deletion syndrome.Shin JJ, Shin HJ, Gutierrez A, Yoo N, Par-Young J, Osmani L, Shin MS, Sanchez-Lara PA, Bucala R, Soffer G, Kang I. EBioMedicine. 2025 Jan 29; 2025 Jan 29. PMID: 39891996.
• Differences in immune cells and gene expression in human milk by parity on integrated scRNA sequencing.Yi DY, Park HJ, Shin MS, Kim H, Lee SJ, Kang I. Clin Exp Pediatr. 2025 Jan 10; 2025 Jan 10. PMID: 39810510.
• Host-microbe multiomic profiling identifies distinct COVID-19 immune dysregulation in solid organ transplant recipients.Pickering H, Schaenman J, Phan HV, Maguire C, Tsitsiklis A, Rouphael N, Higuita NIA, Atkinson MA, Brakenridge S, Fung M, Messer W, Salehi-Rad R, Altman MC, Becker PM, Bosinger SE, Eckalbar W, Hoch A, Doni Jayavelu N, Kim-Schulze S, Jenkins M, Kleinstein SH, Krammer F, Maecker HT, Ozonoff A, Diray-Arce J, Shaw A, Baden L, Levy O, Reed EF, Langelier CR. Nat Commun. 2025 Jan 10; 2025 Jan 10. PMID: 39794319.
• The spectrum of cutaneous and systemic manifestations associated with anti-PM/Scl: Insights from a single institution case series.Saeed SM, Gehlhausen JR, Koumpouras F, Ramachandran S. J Am Acad Dermatol. 2025 Jan 3; 2025 Jan 3. PMID: 39756619.
• Testing the Feasibility of a Cross-Setting Measure to Address the Rising Trend in Hospital Outpatient TJA Procedures.Wallace LR, Tan Z, Barthel A, Sáenz MP, Grady JN, Balestracci KMB, Bozic KJ, Myers R, McDonough DL, Lin Z, Suter LG. J Bone Joint Surg Am. 2024 Dec 5; 2024 Dec 5. PMID: 39637009.
• Processing and validation of inpatient Medicare Advantage data for use in hospital outcome measures.Kyanko KA, Sahay KM, Wang Y, Schreiber M, Hager M, Myers R, Johnson W, Zhang J, Yen BJ, Suter LG, Triche EW, Li SX. Health Serv Res. 2024 Dec; 2024 Jul 3. PMID: 38961668.
• SenNet recommendations for detecting senescent cells in different tissues.Suryadevara V, Hudgins AD, Rajesh A, Pappalardo A, Karpova A, Dey AK, Hertzel A, Agudelo A, Rocha A, Soygur B, Schilling B, Carver CM, Aguayo-Mazzucato C, Baker DJ, Bernlohr DA, Jurk D, Mangarova DB, Quardokus EM, Enninga EAL, Schmidt EL, Chen F, Duncan FE, Cambuli F, Kaur G, Kuchel GA, Lee G, Daldrup-Link HE, Martini H, Phatnani H, Al-Naggar IM, Rahman I, Nie J, Passos JF, Silverstein JC, Campisi J, Wang J, Iwasaki K, Barbosa K, Metis K, Nernekli K, Niedernhofer LJ, Ding L, Wang L, Adams LC, Ruiyang L, Doolittle ML, Teneche MG, Schafer MJ, Xu M, Hajipour M, Boroumand M, Basisty N, Sloan N, Slavov N, Kuksenko O, Robson P, Gomez PT, Vasilikos P, Adams PD, Carapeto P, Zhu Q, Ramasamy R, Perez-Lorenzo R, Fan R, Dong R, Montgomery RR, Shaikh S, Vickovic S, Yin S, Kang S, Suvakov S, Khosla S, Garovic VD, Menon V, Xu Y, Song Y, Suh Y, Dou Z, Neretti N. Nat Rev Mol Cell Biol. 2024 Dec; 2024 Jun 3. PMID: 38831121.
• Chronic Viral Reactivation and Associated Host Immune Response and Clinical Outcomes in Acute COVID-19 and Post-Acute Sequelae of COVID-19.Maguire C, Chen J, Rouphael N, Pickering H, Phan HV, Glascock A, Chu V, Dandekar R, Corry D, Kheradmand F, Baden LR, Selaky R, McComsey GA, Haddad EK, Cairns CB, Pulendran B, Fernandez-Sesma A, Simon V, Metcalf JP, Higuita NIA, Messer WB, David MM, Nadeau KC, Kraft M, Bime C, Schaenman J, Erle D, Calfee CS, Atkinson MA, Brackenridge SC, Ehrlich LIR, Montgomery RR, Shaw AC, Hough CL, Geng LN, Hafler DA, Augustine AD, Becker PM, Peters B, Ozonoff A, Kim-Schulze SH, Krammer F, Bosinger S, Eckalbar W, Altman MC, Wilson M, Guan L, Kleinstein SH, Smolen KK, Reed EF, Levy O, Maecker H, Hunt P, Steen H, Diray-Arce J, Langelier CR, Melamed E. bioRxiv. 2024 Nov 16; 2024 Nov 16. PMID: 39605478.
• KLF13 promotes SLE pathogenesis by modifying chromatin accessibility of key proinflammatory cytokine genes.Wang A, Fairhurst AM, Liu K, Wakeland B, Barnes S, Malladi VS, Viswanathan K, Arana C, Dozmorov I, Singhar A, Du Y, Imam M, Moses A, Chen C, Sunkavalli A, Casco J, Rakheja D, Li QZ, Mohan C, Clayberger C, Wakeland EK, Khan S. Commun Biol. 2024 Nov 6; 2024 Nov 6. PMID: 39506084.
• Expression of IL-7Rα(low)CX3CR1(+) CD8(+) T Cells and α4β7 Integrin Tagged T Cells Related to Mucosal Immunity in Children with Inflammatory Bowel Disease.Yang DH, Kim HJ, Dinh DTT, Yang J, Hyun CL, Jee Y, Lee N, Shin MS, Kang I, Kang KS. Pediatr Gastroenterol Hepatol Nutr. 2024 Nov; 2024 Nov 5. PMID: 39563840.
• COVID-19 Breakthrough Infection after Vaccination and Substance Use Disorders: A Longitudinal Cohort of People with and without HIV Receiving Care in the United States Veterans Health Administration.Soyer EM, McGinnis KA, Justice AC, Hsieh E, Rodriguez-Barradas MC, Williams EC, Park LS. AIDS Behav. 2024 Nov; 2024 Jul 24. PMID: 39046612.
• The Feasibility and Acceptability of a Clinical Pharmacist-delivered Intervention to Reduce Bothersome Health Symptoms from Polypharmacy and Alcohol Use and Communicate Risk among People with HIV: Pilot Study Protocol.Womack JA, Leblanc MM, Sager AS, Zaets LN, Maisto SA, Garcia A, Aoun-Barakat L, Brown SE, Edelman EJ, Fiellin DA, Fisher J, Fraenkel L, Kidwai-Khan F, Marconi VC, Martino S, Pulk R, Satre DD, Virata M, Justice AC, Hsieh E. AIDS Behav. 2024 Oct 28; 2024 Oct 28. PMID: 39465468.
• Inclusion of Veterans Health Administration hospitals in Centers for Medicare & Medicaid Services Overall Hospital Quality Star Ratings.Bagshaw K, Gettel CJ, Qin L, Lin Z, Suter LG, Rothenberg E, Omotosho P, Duseja R, Krabacher J, Schreiber M, Nakashima T, Myers R, Venkatesh AK. J Hosp Med. 2024 Oct 21; 2024 Oct 21. PMID: 39434547.
• The Association Between Rheumatic Disease Therapies and Cardiovascular Outcomes in People with HIV-A Retrospective Cohort Study.Titanji BK, Nagatomi S, Gallini JW, Cui X, Hanberg JS, Hsieh E, Marconi VC. J Clin Med. 2024 Oct 18; 2024 Oct 18. PMID: 39458159.
• BoneScore: A natural language processing algorithm to extract bone mineral density data from DXA scans.Fodeh S, Wang R, Murphy TE, Kidwai-Khan F, Leo-Summers LS, Tessier-Sherman B, Hsieh E, Womack JA. Health Informatics J. 2024 Oct-Dec. PMID: 39526751.
• Temporal arteritis presenting as third nerve palsy - a case report and review of literature.Arya Pv A, Madathanapalli KA, Tenezaca FC, Wang A. Rheumatol Int. 2024 Oct; 2024 May 13. PMID: 38739224.
• Assessment of Pathology Domain-Specific Knowledge of ChatGPT and Comparison to Human Performance.Wang AY, Lin S, Tran C, Homer RJ, Wilsdon D, Walsh JC, Goebel EA, Sansano I, Sonawane S, Cockenpot V, Mukhopadhyay S, Taskin T, Zahra N, Cima L, Semerci O, Özamrak BG, Mishra P, Vennavalli NS, Chen PC, Cecchini MJ. Arch Pathol Lab Med. 2024 Oct 1. PMID: 38244054.
• Combining short- and long-read sequencing unveils geographically structured diversity in Borrelia miyamotoi.Hoornstra D, Kuleshov KV, Fingerle V, Hepner S, Wagemakers A, Strube C, Castillo-Ramírez S, Bockenstedt LK, Telford SR, Sprong H, Platonov AE, Margos G, Hovius JW. iScience. 2024 Sep 20; 2024 Jul 30. PMID: 39262806.
• Relationship of MicroRNA according to Immune Components of Breast Milk in Korean Lactating Mothers.Choi YJ, Lee DH, Song J, Kim KU, Min H, Chung SH, Kim TH, Kim CY, Kang I, Lee NM, Yi DY. Pediatr Gastroenterol Hepatol Nutr. 2024 Sep; 2024 Sep 9. PMID: 39319280.
• Outcomes following total shoulder arthroplasty in patients with systemic lupus erythematosus.Salib A, Sanchez JG, Huggins L, Seddio AE, Dhodapkar MM, Smith-Voudouris J, Norman M, Koumpouras F, Grauer JN. J Shoulder Elbow Surg. 2024 Aug 16; 2024 Aug 16. PMID: 39154846.
• Insights From Omics in Lyme Disease.Bockenstedt LK, Belperron AA. J Infect Dis. 2024 Aug 14. PMID: 39140719.
• 2023 American College of Rheumatology (ACR)/American College of Chest Physicians (CHEST) Guideline for the Treatment of Interstitial Lung Disease in People with Systemic Autoimmune Rheumatic Diseases.Johnson SR, Bernstein EJ, Bolster MB, Chung JH, Danoff SK, George MD, Khanna D, Guyatt G, Mirza RD, Aggarwal R, Allen A Jr, Assassi S, Buckley L, Chami HA, Corwin DS, Dellaripa PF, Domsic RT, Doyle TJ, Falardeau CM, Frech TM, Gibbons FK, Hinchcliff M, Johnson C, Kanne JP, Kim JS, Lim SY, Matson S, McMahan ZH, Merck SJ, Nesbitt K, Scholand MB, Shapiro L, Sharkey CD, Summer R, Varga J, Warrier A, Agarwal SK, Antin-Ozerkis D, Bemiss B, Chowdhary V, Dematte D'Amico JE, Hallowell R, Hinze AM, Injean PA, Jiwrajka N, Joerns EK, Lee JS, Makol A, McDermott GC, Natalini JG, Oldham JM, Saygin D, Lakin KS, Singh N, Solomon JJ, Sparks JA, Turgunbaev M, Vaseer S, Turner A, Uhl S, Ivlev I. Arthritis Rheumatol. 2024 Aug; 2024 Jul 8. PMID: 38978310.
• 2023 American College of Rheumatology (ACR)/American College of Chest Physicians (CHEST) Guideline for the Treatment of Interstitial Lung Disease in People with Systemic Autoimmune Rheumatic Diseases.Johnson SR, Bernstein EJ, Bolster MB, Chung JH, Danoff SK, George MD, Khanna D, Guyatt G, Mirza RD, Aggarwal R, Allen A Jr, Assassi S, Buckley L, Chami HA, Corwin DS, Dellaripa PF, Domsic RT, Doyle TJ, Falardeau CM, Frech TM, Gibbons FK, Hinchcliff M, Johnson C, Kanne JP, Kim JS, Lim SY, Matson S, McMahan ZH, Merck SJ, Nesbitt K, Scholand MB, Shapiro L, Sharkey CD, Summer R, Varga J, Warrier A, Agarwal SK, Antin-Ozerkis D, Bemiss B, Chowdhary V, Dematte D'Amico JE, Hallowell R, Hinze AM, Injean PA, Jiwrajka N, Joerns EK, Lee JS, Makol A, McDermott GC, Natalini JG, Oldham JM, Saygin D, Lakin KS, Singh N, Solomon JJ, Sparks JA, Turgunbaev M, Vaseer S, Turner A, Uhl S, Ivlev I. Arthritis Care Res (Hoboken). 2024 Aug; 2024 Jul 8. PMID: 38973731.
• 2023 American College of Rheumatology (ACR)/American College of Chest Physicians (CHEST) Guideline for the Screening and Monitoring of Interstitial Lung Disease in People with Systemic Autoimmune Rheumatic Diseases.Johnson SR, Bernstein EJ, Bolster MB, Chung JH, Danoff SK, George MD, Khanna D, Guyatt G, Mirza RD, Aggarwal R, Allen A Jr, Assassi S, Buckley L, Chami HA, Corwin DS, Dellaripa PF, Domsic RT, Doyle TJ, Falardeau CM, Frech TM, Gibbons FK, Hinchcliff M, Johnson C, Kanne JP, Kim JS, Lim SY, Matson S, McMahan ZH, Merck SJ, Nesbitt K, Scholand MB, Shapiro L, Sharkey CD, Summer R, Varga J, Warrier A, Agarwal SK, Antin-Ozerkis D, Bemiss B, Chowdhary V, Dematte D'Amico JE, Hallowell R, Hinze AM, Injean PA, Jiwrajka N, Joerns EK, Lee JS, Makol A, McDermott GC, Natalini JG, Oldham JM, Saygin D, Lakin KS, Singh N, Solomon JJ, Sparks JA, Turgunbaev M, Vaseer S, Turner A, Uhl S, Ivlev I. Arthritis Care Res (Hoboken). 2024 Aug; 2024 Jul 8. PMID: 38973729.
• 2023 American College of Rheumatology (ACR)/American College of Chest Physicians (CHEST) Guideline for the Screening and Monitoring of Interstitial Lung Disease in People with Systemic Autoimmune Rheumatic Diseases.Johnson SR, Bernstein EJ, Bolster MB, Chung JH, Danoff SK, George MD, Khanna D, Guyatt G, Mirza RD, Aggarwal R, Allen A Jr, Assassi S, Buckley L, Chami HA, Corwin DS, Dellaripa PF, Domsic RT, Doyle TJ, Falardeau CM, Frech TM, Gibbons FK, Hinchcliff M, Johnson C, Kanne JP, Kim JS, Lim SY, Matson S, McMahan ZH, Merck SJ, Nesbitt K, Scholand MB, Shapiro L, Sharkey CD, Summer R, Varga J, Warrier A, Agarwal SK, Antin-Ozerkis D, Bemiss B, Chowdhary V, Dematte D'Amico JE, Hallowell R, Hinze AM, Injean PA, Jiwrajka N, Joerns EK, Lee JS, Makol A, McDermott GC, Natalini JG, Oldham JM, Saygin D, Lakin KS, Singh N, Solomon JJ, Sparks JA, Turgunbaev M, Vaseer S, Turner A, Uhl S, Ivlev I. Arthritis Rheumatol. 2024 Aug; 2024 Jul 8. PMID: 38973714.
• Activated sputum eosinophils associated with exacerbations in children on mepolizumab.Wilson GE, Knight J, Liu Q, Shelar A, Stewart E, Wang X, Yan X, Sanders J, Visness C, Gill M, Gruchalla R, Liu AH, Kattan M, Khurana Hershey GK, Togias A, Becker PM, Altman MC, Busse WW, Jackson DJ, Montgomery RR, Chupp GL. J Allergy Clin Immunol. 2024 Aug; 2024 Mar 12. PMID: 38485057.
• Prognostic and therapeutic insights into MIF, DDT, and CD74 in melanoma.Valdez CN, Sánchez-Zuno GA, Osmani L, Ibrahim W, Galan A, Bacchiocchi A, Halaban R, Kulkarni RP, Kang I, Bucala R, Tran T. Oncotarget. 2024 Jul 19; 2024 Jul 19. PMID: 39028303.
• Is yearly interferon gamma release assay latent tuberculosis infection screening warranted among patients with rheumatological diseases on disease-modifying drugs in non-endemic settings?Palacios CF, Chowdhary V, Hao R, Danve A, Malinis M. PLoS One. 2024; 2024 Jul 3. PMID: 38959249.
• A dual-acting DNASE1/DNASE1L3 biologic prevents autoimmunity and death in genetic and induced lupus models.Stabach PR, Sims D, Gomez-Bañuelos E, Zehentmeier S, Dammen-Brower K, Bernhisel A, Kujawski S, Lopez SG, Petri M, Goldman DW, Lester ER, Le Q, Ishaq T, Kim H, Srivastava S, Kumar D, Pereira JP, Yarema KJ, Koumpouras F, Andrade F, Braddock DT. JCI Insight. 2024 Jun 18; 2024 Jun 18. PMID: 38888971.
• Incorporating Medicare Advantage Admissions Into the CMS Hospital-Wide Readmission Measure.Kyanko K, Sahay KM, Wang Y, Li SX, Schreiber M, Hager M, Myers R, Johnson W, Zhang J, Krumholz H, Suter LG, Triche EW. JAMA Netw Open. 2024 Jun 3; 2024 Jun 3. PMID: 38829614.
• Calculation of Overall Hospital Quality Star Ratings With and Without Inclusion of the Peer Grouping Step.Gettel CJ, Bagshaw K, Qin L, Lin Z, Rothenberg E, Omotosho P, Goutos DP, Herrin J, Suter LG, Schreiber M, Fleisher LA, Myers R, Venkatesh AK. JAMA Netw Open. 2024 May 1; 2024 May 1. PMID: 38753326.
• Integrated longitudinal multiomics study identifies immune programs associated with acute COVID-19 severity and mortality.Gygi JP, Maguire C, Patel RK, Shinde P, Konstorum A, Shannon CP, Xu L, Hoch A, Jayavelu ND, Haddad EK, Reed EF, Kraft M, McComsey GA, Metcalf JP, Ozonoff A, Esserman D, Cairns CB, Rouphael N, Bosinger SE, Kim-Schulze S, Krammer F, Rosen LB, van Bakel H, Wilson M, Eckalbar WL, Maecker HT, Langelier CR, Steen H, Altman MC, Montgomery RR, Levy O, Melamed E, Pulendran B, Diray-Arce J, Smolen KK, Fragiadakis GK, Becker PM, Sekaly RP, Ehrlich LI, Fourati S, Peters B, Kleinstein SH, Guan L. J Clin Invest. 2024 May 1; 2024 May 1. PMID: 38690733.
• IL-1 receptor 1 signaling shapes the development of viral antigen-specific CD4(+) T cell responses following COVID-19 mRNA vaccination.Park HJ, Shin MS, Shin JJ, Kim H, Kang B, Par-Young J, Unlu S, Afinogenova Y, Catanzaro J, Young J, Kim M, Lee SJ, Jeon S, You S, Racke MK, Bucala R, Kang I. EBioMedicine. 2024 May; 2024 Apr 18. PMID: 38640835.
• Chimeric antigen receptors: "CARs" in the fast lane for rheumatology.Johnson NM, Koumpouras F. Curr Opin Rheumatol. 2024 May 1; 2024 Mar 26. PMID: 38517338.
• Host-microbe multiomic profiling reveals age-dependent immune dysregulation associated with COVID-19 immunopathology.Phan HV, Tsitsiklis A, Maguire CP, Haddad EK, Becker PM, Kim-Schulze S, Lee B, Chen J, Hoch A, Pickering H, van Zalm P, Altman MC, Augustine AD, Calfee CS, Bosinger S, Cairns CB, Eckalbar W, Guan L, Jayavelu ND, Kleinstein SH, Krammer F, Maecker HT, Ozonoff A, Peters B, Rouphael N, Montgomery RR, Reed E, Schaenman J, Steen H, Levy O, Diray-Arce J, Langelier CR. Sci Transl Med. 2024 Apr 17; 2024 Apr 17. PMID: 38630846.
• Long-Term Safety and Efficacy of Mavacamten in Symptomatic Obstructive Hypertrophic Cardiomyopathy: Interim Results of the PIONEER-OLE Study.Masri A, Lester SJ, Stendahl JC, Hegde SM, Sehnert AJ, Balaratnam G, Shah A, Fox S, Wang A. J Am Heart Assoc. 2024 Apr 16; 2024 Apr 9. PMID: 38591260.
• Pre-COVID-19 hospital quality and hospital response to COVID-19: examining associations between risk-adjusted mortality for patients hospitalised with COVID-19 and pre-COVID-19 hospital quality.Peter D, Li SX, Wang Y, Zhang J, Grady J, McDowell K, Norton E, Lin Z, Bernheim S, Venkatesh AK, Fleisher LA, Schreiber M, Suter LG, Triche EW. BMJ Open. 2024 Mar 29; 2024 Mar 29. PMID: 38553067.
• Host-Microbe Multiomic Profiling Reveals Age-Dependent COVID-19 Immunopathology.Van Phan H, Tsitsiklis A, Maguire CP, Haddad EK, Becker PM, Kim-Schulze S, Lee B, Chen J, Hoch A, Pickering H, Van Zalm P, Altman MC, Augustine AD, Calfee CS, Bosinger S, Cairns C, Eckalbar W, Guan L, Jayavelu ND, Kleinstein SH, Krammer F, Maecker HT, Ozonoff A, Peters B, Rouphael N, Montgomery RR, Reed E, Schaenman J, Steen H, Levy O, Diray-Arce J, Langelier CR. medRxiv. 2024 Feb 13; 2024 Feb 13. PMID: 38405760.
• Small-molecule CBP/p300 histone acetyltransferase inhibition mobilizes leukocytes from the bone marrow via the endocrine stress response.Jaschke NP, Breining D, Hofmann M, Pählig S, Baschant U, Oertel R, Traikov S, Grinenko T, Saettini F, Biondi A, Stylianou M, Bringmann H, Zhang C, Yoshida TM, Weidner H, Poller WC, Swirski FK, Göbel A, Hofbauer LC, Rauner M, Scheiermann C, Wang A, Rachner TD. Immunity. 2024 Feb 13; 2024 Jan 31. PMID: 38301651.
• Patient-Reported Outcome-Based Performance Measures in Alternative Payment Models: Current Use, Implementation Barriers, and Principles to Succeed.Gettel CJ, Suter LG, Bagshaw K, Sheares KD, Balestracci KMB, Lin Z, Venkatesh AK. Value Health. 2024 Feb; 2023 Dec 1. PMID: 38042334.
• Proteome Analysis for Inflammation Related to Acute and Convalescent Infection.Sigdel TK, Sur S, Boada P, McDermott SM, Arlehamn CSL, Murray KO, Bockenstedt LK, Kerwin M, Reed EF, Harris E, Stuart K, Peters B, Sesma A, Montgomery RR, Sarwal MM. Inflammation. 2024 Feb; 2023 Oct 13. PMID: 37831367.
• "Deficiency in ELF4, X-Linked": a Monogenic Disease Entity Resembling Behçet's Syndrome and Inflammatory Bowel Disease.Olyha SJ, O'Connor SK, Kribis M, Bucklin ML, Uthaya Kumar DB, Tyler PM, Alam F, Jones KM, Sheikha H, Konnikova L, Lakhani SA, Montgomery RR, Catanzaro J, Du H, DiGiacomo DV, Rothermel H, Moran CJ, Fiedler K, Warner N, Hoppenreijs EPAH, van der Made CI, Hoischen A, Olbrich P, Neth O, Rodríguez-Martínez A, Lucena Soto JM, van Rossum AMC, Dalm VASH, Muise AM, Lucas CL. J Clin Immunol. 2024 Jan 17; 2024 Jan 17. PMID: 38231408.
• Features of acute COVID-19 associated with post-acute sequelae of SARS-CoV-2 phenotypes: results from the IMPACC study.Ozonoff A, Jayavelu ND, Liu S, Melamed E, Milliren CE, Qi J, Geng LN, McComsey GA, Cairns CB, Baden LR, Schaenman J, Shaw AC, Samaha H, Seyfert-Margolis V, Krammer F, Rosen LB, Steen H, Syphurs C, Dandekar R, Shannon CP, Sekaly RP, Ehrlich LIR, Corry DB, Kheradmand F, Atkinson MA, Brakenridge SC, Higuita NIA, Metcalf JP, Hough CL, Messer WB, Pulendran B, Nadeau KC, Davis MM, Sesma AF, Simon V, van Bakel H, Kim-Schulze S, Hafler DA, Levy O, Kraft M, Bime C, Haddad EK, Calfee CS, Erle DJ, Langelier CR, Eckalbar W, Bosinger SE, Peters B, Kleinstein SH, Reed EF, Augustine AD, Diray-Arce J, Maecker HT, Altman MC, Montgomery RR, Becker PM, Rouphael N. Nat Commun. 2024 Jan 3; 2024 Jan 3. PMID: 38172101.
• Global Perspective on the Impact of the COVID-19 Pandemic on Rheumatology and Health Equity.Hsieh E, Dey D, Grainger R, Li M, Machado PM, Ugarte-Gil MF, Yazdany J. Arthritis Care Res (Hoboken). 2024 Jan; 2023 Jul 20. PMID: 37277949.
• Early cellular and molecular signatures correlate with severity of West Nile virus infection.Lee HJ, Zhao Y, Fleming I, Mehta S, Wang X, Wyk BV, Ronca SE, Kang H, Chou CH, Fatou B, Smolen KK, Levy O, Clish CB, Xavier RJ, Steen H, Hafler DA, Love JC, Shalek AK, Guan L, Murray KO, Kleinstein SH, Montgomery RR. iScience. 2023 Dec 15; 2023 Nov 2. PMID: 38047068.
• Self-care and healthcare seeking practices among patients with hypertension and diabetes in rural Uganda.Tusubira AK, Ssinabulya I, Kalyesubula R, Nalwadda CK, Akiteng AR, Ngaruiya C, Rabin TL, Katahoire A, Armstrong-Hough M, Hsieh E, Hawley NL, Schwartz JI. PLOS Glob Public Health. 2023; 2023 Dec 11. PMID: 38079386.
• Aging gene signature of memory CD8(+) T cells is associated with neurocognitive functioning in Alzheimer's disease.Young JJ, Park HJ, Kim M, Par-Young J, Bartlett H, Kim HS, Unlu S, Osmani L, Shin MS, Bucala R, van Dyck CH, Allore H, Mecca AP, You S, Kang I. Immun Ageing. 2023 Dec 2; 2023 Dec 2. PMID: 38042785.
• Natural isoaspartyl protein modification of ZAP70 alters T cell responses in lupus.Yang ML, Lam TT, Kanyo J, Kang I, Zhou ZS, Clarke SG, Mamula MJ. Autoimmunity. 2023 Dec; 2023 Nov 23. PMID: 37994408.
• Corrigendum to "Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: results from the IMPACC study" [eBioMedicine 83 (2022) 104208].Ozonoff A, Schaenman J, Jayavelu ND, Milliren CE, Calfee CS, Cairns CB, Kraft M, Baden LR, Shaw AC, Krammer F, van Bakel H, Esserman DA, Liu S, Sesma AF, Simon V, Hafler DA, Montgomery RR, Kleinstein SH, Levy O, Bime C, Haddad EK, Erle DJ, Pulendran B, Nadeau KC, Davis MM, Hough CL, Messer WB, Agudelo Higuita NI, Metcalf JP, Atkinson MA, Brakenridge SC, Corry D, Kheradmand F, Ehrlich LIR, Melamed E, McComsey GA, Sekaly R, Diray-Arce J, Peters B, Augustine AD, Reed EF, Altman MC, Becker PM, Rouphael N. EBioMedicine. 2023 Dec; 2023 Nov 1. PMID: 37918220.
• Obexelimab in Systemic Lupus Erythematosus With Exploration of Response Based on Gene Pathway Co-Expression Patterns: A Double-Blind, Randomized, Placebo-Controlled, Phase 2 Trial.Merrill JT, Guthridge J, Smith M, June J, Koumpouras F, Machua W, Askanase A, Khosroshahi A, Sheikh SZ, Rathi G, Burington B, Foster P, Matijevic M, Arora S, Wang X, Gao M, Wax S, James JA, Zack DJ. Arthritis Rheumatol. 2023 Dec. PMID: 37459248.
• Leveraging Quality Measurement to Achieve Best Practice Rheumatology Care: Can Pediatrics Lead Us?Jatwani S, Suter LG. Arthritis Care Res (Hoboken). 2023 Dec; 2023 Sep 13. PMID: 37458090.
• Development of American College of Rheumatology Quality Measures for Systemic Lupus Erythematosus: A Modified Delphi Process With Rheumatology Informatics System for Effectiveness (RISE) Registry Data Review.Bartels CM, Jorge A, Feldman CH, Zell J, Bermas B, Barber CEH, Duarte-García A, Garg S, Haseley L, Jatwani S, Johansson T, Limanni A, Rodgers W, Rovin BH, Santiago-Casas Y, Suter LG, Barnado A, Ude J, Aguirre A, Li J, Schmajuk G, Yazdany J. Arthritis Care Res (Hoboken). 2023 Nov; 2023 Jun 19. PMID: 37165898.
• A Prototype-Pathogen Approach for the Development of Flavivirus Countermeasures.Kuhn RJ, Barrett ADT, Desilva AM, Harris E, Kramer LD, Montgomery RR, Pierson TC, Sette A, Diamond MS. J Infect Dis. 2023 Oct 18. PMID: 37849402.
• Incidence, Microbiological Studies, and Factors Associated With Prosthetic Joint Infection After Total Knee Arthroplasty.Weinstein EJ, Stephens-Shields AJ, Newcomb CW, Silibovsky R, Nelson CL, O'Donnell JA, Glaser LJ, Hsieh E, Hanberg JS, Tate JP, Akgün KM, King JT Jr, Lo Re V 3rd. JAMA Netw Open. 2023 Oct 2; 2023 Oct 2. PMID: 37906194.
• High-plex protein and whole transcriptome co-mapping at cellular resolution with spatial CITE-seq.Liu Y, DiStasio M, Su G, Asashima H, Enninful A, Qin X, Deng Y, Nam J, Gao F, Bordignon P, Cassano M, Tomayko M, Xu M, Halene S, Craft JE, Hafler D, Fan R. Nat Biotechnol. 2023 Oct; 2023 Feb 23. PMID: 36823353.
• The neurocircuitry of fasting-induced glucocorticoid release.Jaschke NP, Wang A. Cell Metab. 2023 Sep 5. PMID: 37673035.
• Understanding Heterogeneity in Patients' Conceptualisation of Treatment for Rheumatoid Arthritis: A Cluster Analysis.Hsiao B, Downs JS, Lanyon M, Blalock SJ, Curtis JR, Harrold LR, Nowell WB, Wiedmeyer C, Venkatachalam S, Patterson MT, Gavigan K, Stradford L, Ali D, Fraenkel L. BMJ Open. 2023 Sep 4; 2023 Sep 4. PMID: 37666546.
• Prior cycles of anti-CD20 antibodies affect antibody responses after repeated SARS-CoV-2 mRNA vaccination.Asashima H, Kim D, Wang K, Lele N, Buitrago-Pocasangre NC, Lutz R, Cruz I, Raddassi K, Ruff WE, Racke MK, Wilson JE, Givens TS, Grifoni A, Weiskopf D, Sette A, Kleinstein SH, Montgomery RR, Shaw AC, Li F, Fan R, Hafler DA, Tomayko MM, Longbrake EE. JCI Insight. 2023 Aug 22; 2023 Aug 22. PMID: 37606046.
• Assessment of regional body composition, physical function and sarcopenia among peruvian women aging with HIV: A cross-sectional study.Cabrera DM, Cornejo MP, Pinedo Y, Garcia PJ, Hsieh E. PLOS Glob Public Health. 2023; 2023 Aug 18. PMID: 37594923.
• Utilization and Outcomes of Primary Prevention Implantable Cardioverter-Defibrillators in Patients With Hypertrophic Cardiomyopathy.Goldstein SA, Kennedy KF, Friedman DJ, Al-Khatib SM, Wang A. J Am Heart Assoc. 2023 Aug 15; 2023 Aug 10. PMID: 37586066.
• Immune sensing of food allergens promotes avoidance behaviour.Florsheim EB, Bachtel ND, Cullen JL, Lima BGC, Godazgar M, Carvalho F, Chatain CP, Zimmer MR, Zhang C, Gautier G, Launay P, Wang A, Dietrich MO, Medzhitov R. Nature. 2023 Aug; 2023 Jul 12. PMID: 37437602.
• Performance of a modified fracture risk assessment tool for fragility fracture prediction among older veterans living with HIV.Womack JA, Murphy TE, Leo-Summers L, Kidwai-Khan F, Skanderson M, Gill TM, Gulanski B, Rodriguez-Barradas MC, Tien PC, Yin MT, Hsieh E. AIDS. 2023 Jul 15; 2023 Apr 5. PMID: 37070536.
• Multi-omic longitudinal study reveals immune correlates of clinical course among hospitalized COVID-19 patients.Diray-Arce J, Fourati S, Doni Jayavelu N, Patel R, Maguire C, Chang AC, Dandekar R, Qi J, Lee BH, van Zalm P, Schroeder A, Chen E, Konstorum A, Brito A, Gygi JP, Kho A, Chen J, Pawar S, Gonzalez-Reiche AS, Hoch A, Milliren CE, Overton JA, Westendorf K, Cairns CB, Rouphael N, Bosinger SE, Kim-Schulze S, Krammer F, Rosen L, Grubaugh ND, van Bakel H, Wilson M, Rajan J, Steen H, Eckalbar W, Cotsapas C, Langelier CR, Levy O, Altman MC, Maecker H, Montgomery RR, Haddad EK, Sekaly RP, Esserman D, Ozonoff A, Becker PM, Augustine AD, Guan L, Peters B, Kleinstein SH. Cell Rep Med. 2023 Jun 20; 2023 May 23. PMID: 37327781.
• Assessing the contributions of modifiable risk factors to serious falls and fragility fractures among older persons living with HIV.Womack JA, Murphy TE, Leo-Summers L, Bates J, Jarad S, Gill TM, Hsieh E, Rodriguez-Barradas MC, Tien PC, Yin MT, Brandt CA, Justice AC. J Am Geriatr Soc. 2023 Jun; 2023 Mar 13. PMID: 36912153.
• Prevalence of and risk factors for vertebral fracture and low bone mineral density among Peruvian women aging with HIV.Cabrera DM, Cornejo MP, Slotkin R, Pinedo Y, Yu W, Guan W, Garcia PJ, Hsieh E. Arch Osteoporos. 2023 May 10; 2023 May 10. PMID: 37160770.
• FGF-21 Conducts a Liver-Brain-Kidney Axis to Promote Renal Cell Carcinoma.Li Z, Zhang X, Zhu W, Zhang C, Sadak K, Halberstam AA, Brown JR, Perry CJ, Bunn A, Braun DA, Adeniran A, Lee S, Wang A, Perry RJ. bioRxiv. 2023 Apr 13; 2023 Apr 13. PMID: 37090652.
• Aging gene signature of IL-7 receptor alpha low effector memory CD8(+) T cells is associated with neurocognitive functioning in Alzheimer's disease.Young J, Park HJ, Kim M, Par-Young J, Bartlett H, Kim HS, Unlu S, Osmani L, Shin MS, Bucala R, van Dyck C, Allore H, Mecca A, You S, Kang I. Res Sq. 2023 Apr 4; 2023 Apr 4. PMID: 37066364.
• Vascular-Targeted Therapy for Systemic Lupus Erythematosus-Associated Vasculitis.Xu S, Patrignelli RJ, Ramachandran S, Koumpouras F, Desir D, Ko CJ, Gehlhausen JR. JAMA Dermatol. 2023 Apr 1. PMID: 36884229.
• Mature B cells and mesenchymal stem cells control emergency myelopoiesis.Lim VY, Feng X, Miao R, Zehentmeier S, Ewing-Crystal N, Lee M, Tumanov AV, Oh JE, Iwasaki A, Wang A, Choi J, Pereira JP. Life Sci Alliance. 2023 Apr; 2023 Jan 30. PMID: 36717247.
• Cost-Effectiveness of Surgical Weight-Loss Interventions for Patients With Knee Osteoarthritis and Class III Obesity.Kostic AM, Leifer VP, Gong Y, Robinson MK, Collins JE, Neogi T, Messier SP, Hunter DJ, Selzer F, Suter LG, Katz JN, Losina E. Arthritis Care Res (Hoboken). 2023 Mar; 2022 Nov 17. PMID: 35657632.
• Platelet response to influenza vaccination reflects effects of aging.Konstorum A, Mohanty S, Zhao Y, Melillo A, Vander Wyk B, Nelson A, Tsang S, Blevins TP, Belshe RB, Chawla DG, Rondina MT, Gill TM, Montgomery RR, Allore HG, Kleinstein SH, Shaw AC. Aging Cell. 2023 Feb; 2023 Jan 19. PMID: 36656789.
• Renal tubular acidosis and associated factors in patients with primary Sjögren's syndrome: a registry-based study.Zhang Y, Qiao L, Zhang L, Li Q, Yang P, Kong X, Duan X, Zhang M, Li X, Wang Y, Xu J, Wang Y, Hsieh E, Zhao J, Xu D, Li M, Zhao Y, Zeng X. Clin Rheumatol. 2023 Feb; 2022 Nov 16. PMID: 36383239.
• PD-1(high)CXCR5(-)CD4(+) peripheral helper T cells promote CXCR3(+) plasmablasts in human acute viral infection.Asashima H, Mohanty S, Comi M, Ruff WE, Hoehn KB, Wong P, Klein J, Lucas C, Cohen I, Coffey S, Lele N, Greta L, Raddassi K, Chaudhary O, Unterman A, Emu B, Kleinstein SH, Montgomery RR, Iwasaki A, Dela Cruz CS, Kaminski N, Shaw AC, Hafler DA, Sumida TS. Cell Rep. 2023 Jan 31; 2023 Jan 2. PMID: 36596303.
• Immune sensing of food allergens promotes aversive behaviour.Florsheim EB, Bachtel ND, Cullen J, Lima BGC, Godazgar M, Zhang C, Carvalho F, Gautier G, Launay P, Wang A, Dietrich MO, Medzhitov R. bioRxiv. 2023 Jan 20; 2023 Jan 20. PMID: 36712030.
• Changes in microRNAs during Storage and Processing of Breast Milk.Kim JH, Kim KU, Min H, Lee ES, Lim IS, Song J, Kang I, Yi DY. Metabolites. 2023 Jan 17; 2023 Jan 17. PMID: 36837760.
• Reflections for the 50th Anniversary of The Journal of Rheumatology: The Past, Present, and Future of Rheumatology.Masi AT, Bucala RJ. J Rheumatol. 2023 Jan. PMID: 36587952.
• A discovery-based proteomics approach identifies protein disulphide isomerase (PDIA1) as a biomarker of β cell stress in type 1 diabetes.Syed F, Singhal D, Raedschelders K, Krishnan P, Bone RN, McLaughlin MR, Van Eyk JE, Mirmira RG, Yang ML, Mamula MJ, Wu H, Liu X, Evans-Molina C. EBioMedicine. 2023 Jan; 2022 Dec 1. PMID: 36463755.
• Effect of Androgen-Androgen Receptor Directed Therapy on COVID-19 Outcome in Prostate Cancer Patients.Ünlü S, Shin JJ, Par-Young J, Simonov M, Vinetz J, Petrylak DP, Kang I, Kim JW. Cancer Invest. 2023 Jan; 2022 Nov 17. PMID: 36373994.
• Analytical Approaches to Uncover Genetic Associations for Rare Outcomes: Lessons from West Nile Neuroinvasive Disease.Cahill ME, Montgomery RR. Methods Mol Biol. 2023. PMID: 36331775.
• Implication of IL-7 receptor alpha chain expression by CD8(+) T cells and its signature in defining biomarkers in aging.Shin MS, Park HJ, Young J, Kang I. Immun Ageing. 2022 Dec 21; 2022 Dec 21. PMID: 36544153.
• Dickkopf1 fuels inflammatory cytokine responses.Jaschke NP, Pählig S, Sinha A, Adolph TE, Colunga ML, Hofmann M, Wang A, Thiele S, Schwärzler J, Kleymann A, Gentzel M, Tilg H, Wielockx B, Hofbauer LC, Rauner M, Göbel A, Rachner TD. Commun Biol. 2022 Dec 20; 2022 Dec 20. PMID: 36539532.
• Longitudinal serum proteomics analyses identify unique and overlapping host response pathways in Lyme disease and West Nile virus infection.Boada P, Fatou B, Belperron AA, Sigdel TK, Smolen KK, Wurie Z, Levy O, Ronca SE, Murray KO, Liberto JM, Rashmi P, Kerwin M, Montgomery RR, Bockenstedt LK, Steen H, Sarwal MM. Front Immunol. 2022; 2022 Dec 9. PMID: 36569838.
• Pan-vaccine analysis reveals innate immune endotypes predictive of antibody responses to vaccination.Fourati S, Tomalin LE, Mulè MP, Chawla DG, Gerritsen B, Rychkov D, Henrich E, Miller HER, Hagan T, Diray-Arce J, Dunn P, Levy O, Gottardo R, Sarwal MM, Tsang JS, Suárez-Fariñas M, Pulendran B, Kleinstein SH, Sékaly RP. Nat Immunol. 2022 Dec; 2022 Oct 31. PMID: 36316476.
• Macrophage migration inhibitory factor regulates specific innate immune sensor responses in gingival epithelial cells.Kantrong N, Chang AM, Bamashmous S, Hajjar AM, Bucala RJ, Darveau RP. J Periodontol. 2022 Dec; 2022 Feb 24. PMID: 35100435.
• Circulating Dickkopf1 Parallels Metabolic Adaptations and Predicts Disease Trajectories in Patients With COVID-19.Jaschke NP, Funk AM, Jonas S, Riffel RM, Sinha A, Wang A, Pählig S, Hofmann M, Altmann H, Von Bonin S, Koch T, Spieth P, Tausche K, Akgün K, Rauner M, Kronstein-Wiedemann R, Odendahl M, Tonn T, Göbel A, Hofbauer LC, Rachner TD. J Clin Endocrinol Metab. 2022 Nov 25. PMID: 36071553.
• Biomarkers of autoimmunity and beta cell metabolism in type 1 diabetes.Yang ML, Kibbey RG, Mamula MJ. Front Immunol. 2022; 2022 Oct 27. PMID: 36389721.
• The Immune Signatures data resource, a compendium of systems vaccinology datasets.Diray-Arce J, Miller HER, Henrich E, Gerritsen B, Mulè MP, Fourati S, Gygi J, Hagan T, Tomalin L, Rychkov D, Kazmin D, Chawla DG, Meng H, Dunn P, Campbell J, Sarwal M, Tsang JS, Levy O, Pulendran B, Sekaly R, Floratos A, Gottardo R, Kleinstein SH, Suárez-Fariñas M. Sci Data. 2022 Oct 20; 2022 Oct 20. PMID: 36266291.
• Predictive Risk Model for Serious Falls Among Older Persons Living With HIV.Womack JA, Murphy TE, Leo-Summers L, Bates J, Jarad S, Smith AC, Gill TM, Hsieh E, Rodriguez-Barradas MC, Tien PC, Yin MT, Brandt CA, Justice AC. J Acquir Immune Defic Syndr. 2022 Oct 1. PMID: 36094483.
• Alterations in high-dimensional T-cell profile and gene signature of immune aging in HIV-infected older adults without viremia.Shin MS, Park HJ, Salahuddin S, Montgomery RR, Emu B, Shaw AC, Kang I. Aging Cell. 2022 Oct; 2022 Aug 29. PMID: 36036630.
• Cost-Effectiveness of Arthroscopic Partial Meniscectomy and Physical Therapy for Degenerative Meniscal Tear.Williams EE, Katz JN, Leifer VP, Collins JE, Neogi T, Suter LG, Levy B, Farid A, Safran-Norton CE, Paltiel AD, Losina E. ACR Open Rheumatol. 2022 Oct; 2022 Jul 21. PMID: 35866194.
• The matricellular protein SPARC induces inflammatory interferon-response in macrophages during aging.Ryu S, Sidorov S, Ravussin E, Artyomov M, Iwasaki A, Wang A, Dixit VD. Immunity. 2022 Sep 13; 2022 Aug 12. PMID: 35963236.
• Immune cells and their inflammatory mediators modify β cells and cause checkpoint inhibitor-induced diabetes.Perdigoto AL, Deng S, Du KC, Kuchroo M, Burkhardt DB, Tong A, Israel G, Robert ME, Weisberg SP, Kirkiles-Smith N, Stamatouli AM, Kluger HM, Quandt Z, Young A, Yang ML, Mamula MJ, Pober JS, Anderson MS, Krishnaswamy S, Herold KC. JCI Insight. 2022 Sep 8; 2022 Sep 8. PMID: 35925682.
• Prolonged COVID-19 symptom duration in people with systemic autoimmune rheumatic diseases: results from the COVID-19 Global Rheumatology Alliance Vaccine Survey.DiIorio M, Kennedy K, Liew JW, Putman MS, Sirotich E, Sattui SE, Foster G, Harrison C, Larché MJ, Levine M, Moni TT, Thabane L, Bhana S, Costello W, Grainger R, Machado PM, Robinson PC, Sufka P, Wallace ZS, Yazdany J, Gore-Massy M, Howard RA, Kodhek MA, Lalonde N, Tomasella LA, Wallace J, Akpabio A, Alpízar-Rodríguez D, Beesley RP, Berenbaum F, Bulina I, Chock EY, Conway R, Duarte-García A, Duff E, Gheita TA, Graef ER, Hsieh E, El Kibbi L, Liew DF, Lo C, Nudel M, Singh AD, Singh JA, Singh N, Ugarte-Gil MF, Hausmann JS, Simard JF, Sparks JA. RMD Open. 2022 Sep. PMID: 36104117.
• Spatial profiling of chromatin accessibility in mouse and human tissues.Deng Y, Bartosovic M, Ma S, Zhang D, Kukanja P, Xiao Y, Su G, Liu Y, Qin X, Rosoklija GB, Dwork AJ, Mann JJ, Xu ML, Halene S, Craft JE, Leong KW, Boldrini M, Castelo-Branco G, Fan R. Nature. 2022 Sep; 2022 Aug 17. PMID: 35978191.
• Phenotypes of disease severity in a cohort of hospitalized COVID-19 patients: Results from the IMPACC study.Ozonoff A, Schaenman J, Jayavelu ND, Milliren CE, Calfee CS, Cairns CB, Kraft M, Baden LR, Shaw AC, Krammer F, van Bakel H, Esserman DA, Liu S, Sesma AF, Simon V, Hafler DA, Montgomery RR, Kleinstein SH, Levy O, Bime C, Haddad EK, Erle DJ, Pulendran B, Nadeau KC, Davis MM, Hough CL, Messer WB, Higuita NIA, Metcalf JP, Atkinson MA, Brakenridge SC, Corry D, Kheradmand F, Ehrlich LIR, Melamed E, McComsey GA, Sekaly R, Diray-Arce J, Peters B, Augustine AD, Reed EF, Altman MC, Becker PM, Rouphael N. EBioMedicine. 2022 Sep; 2022 Aug 8. PMID: 35952496.
• Basic principles of neuroimmunology.Yoshida TM, Wang A, Hafler DA. Semin Immunopathol. 2022 Sep; 2022 Jun 22. PMID: 35732977.
• Carbonyl Posttranslational Modification Associated With Early-Onset Type 1 Diabetes Autoimmunity.Yang ML, Connolly SE, Gee RJ, Lam TT, Kanyo J, Peng J, Guyer P, Syed F, Tse HM, Clarke SG, Clarke CF, James EA, Speake C, Evans-Molina C, Arvan P, Herold KC, Wen L, Mamula MJ. Diabetes. 2022 Sep 1. PMID: 35730902.
• Taxonomy of Quality of Care Indicators: Tracing the Path from Clinical Practice Guidelines to Quality Measurement and Beyond.Wahl E, Makris UE, Suter LG. Rheum Dis Clin North Am. 2022 Aug; 2022 Jul 5. PMID: 35953226.