2017
Bisulfite-independent analysis of CpG island methylation enables genome-scale stratification of single cells
Han L, Wu HJ, Zhu H, Kim KY, Marjani SL, Riester M, Euskirchen G, Zi X, Yang J, Han J, Snyder M, Park IH, Irizarry R, Weissman SM, Michor F, Fan R, Pan X. Bisulfite-independent analysis of CpG island methylation enables genome-scale stratification of single cells. Nucleic Acids Research 2017, 45: e77-e77. PMID: 28126923, PMCID: PMC5605247, DOI: 10.1093/nar/gkx026.Peer-Reviewed Original ResearchMeSH KeywordsCell LineCell Line, TumorChromosome MappingCpG IslandsDNA MethylationDNA Restriction EnzymesEpigenesis, GeneticFibroblastsGenetic VariationGenome, HumanHigh-Throughput Nucleotide SequencingHumansInduced Pluripotent Stem CellsK562 CellsLymphocytesPromoter Regions, GeneticSingle-Cell AnalysisConceptsSingle cellsMethylation-sensitive restriction enzyme digestionCpG methylation patternsDNA bisulfite sequencingInduced pluripotent stem cellsSingle-cell levelCpG island methylationPluripotent stem cellsHeterogeneous cell populationsMultiple displacement amplificationEpigenetic heterogeneityMethylation sequencingBisulfite sequencingENCODE dataMethylation patternsMethylation differencesMethylation profilesRestriction enzyme digestionIsland methylationIndividual cellsHematopoietic cellsStem cellsSmall populationSequencingEnzyme digestion
2009
Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells
Chan EM, Ratanasirintrawoot S, Park IH, Manos PD, Loh YH, Huo H, Miller JD, Hartung O, Rho J, Ince TA, Daley GQ, Schlaeger TM. Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells. Nature Biotechnology 2009, 27: 1033-1037. PMID: 19826408, DOI: 10.1038/nbt.1580.Peer-Reviewed Original ResearchConceptsIPS cellsHuman iPS cellsPluripotent stem cellsHeterogeneous cell populationsCell fateSet of markersHuman cellsStem cellsCell populationsCellsFate
1989
The Interactions of Vascular Cells with Solid Phase (Matrix) and Soluble Factors
Madri J, Kocher O, Merwin J, Bell L, Yannariello-Brown J. The Interactions of Vascular Cells with Solid Phase (Matrix) and Soluble Factors. Journal Of Cardiovascular Pharmacology 1989, 14: s70-s75. DOI: 10.1097/00005344-198900146-00015.Peer-Reviewed Original ResearchVascular bedSoluble factorsVascular cellsEndothelial cellsVascular smooth muscle cellsCell populationsSite of injuryMicrovascular endothelial cellsSmooth muscle cellsVessel endothelial cellsLarge vessel endothelial cellsVascular cell populationsVascular injuryIntimal thickeningInjury variesPlatelet factorInjuryMuscle cellsSoft tissueTube formationVessel wallHeterogeneous cell populationsCell typesCellsRepair processThe Interactions of Vascular Cells with Solid Phase (Matrix) and Soluble Factors
Madri J, Kocher O, Merwin J, Bell L, Yannariello-Brown J. The Interactions of Vascular Cells with Solid Phase (Matrix) and Soluble Factors. Journal Of Cardiovascular Pharmacology 1989, 14: s70-s75. PMID: 2478828, DOI: 10.1097/00005344-198906146-00015.Peer-Reviewed Original ResearchConceptsVascular bedSoluble factorsVascular cellsEndothelial cellsVascular smooth muscle cellsCell populationsSite of injuryMicrovascular endothelial cellsSmooth muscle cellsVessel endothelial cellsLarge vessel endothelial cellsVascular cell populationsVascular injuryIntimal thickeningInjury variesPlatelet factorInjuryMuscle cellsSoft tissueTube formationVessel wallHeterogeneous cell populationsCell typesCellsRepair process
1987
The Extracellular Matrix as a Modulator of Angiogenesis
Madri J. The Extracellular Matrix as a Modulator of Angiogenesis. Gwumc Department Of Biochemistry And Molecular Biology Annual Spring Symposia 1987, 177-183. DOI: 10.1007/978-1-4684-5296-9_21.Peer-Reviewed Original ResearchLarge vessel endothelial cellsEndothelial cell populationCell populationsExtracellular matrixEndothelial cellsHeterogeneous cell populationsEndothelial cell behaviorMicrovascular endothelial cellsMulticellular organizationCytoskeletal organizationProliferation rateSheet migrationModulators of angiogenesisMatrix organizationCell behaviorTransport functionMatrix compositionVessel endothelial cellsMatrix componentsMatrix synthesisCellsDiverse vascular bedsSeries of responsesDifferentiationMatrix determines
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