2025
ProDualNet: dual-target protein sequence design method based on protein language model and structure model
Cheng L, Wei T, Cui X, Chen H, Yu Z. ProDualNet: dual-target protein sequence design method based on protein language model and structure model. Briefings In Bioinformatics 2025, 26: bbaf391. PMID: 40856523, PMCID: PMC12378908, DOI: 10.1093/bib/bbaf391.Peer-Reviewed Original ResearchConceptsSequence-structure informationProtein language modelsAllosteric bindingIn silico evaluationSequence design methodProtein sequencesProtein designBinding proteinBiological processesMulti-target strategyProteinHeterogeneous graph networkMultiple receptorsMultiple test setsLanguage modelGraph networkBindingExperimental structuresSingle receptorDesign networksReceptorsTest setTherapeutic potential
2016
Distinct Signaling Thresholds Distinguish Friend from Foe
Miller-Jensen K. Distinct Signaling Thresholds Distinguish Friend from Foe. Cell Systems 2016, 2: 360-361. PMID: 27336965, DOI: 10.1016/j.cels.2016.06.003.Peer-Reviewed Original ResearchDistinct NF-κB and MAPK Activation Thresholds Uncouple Steady-State Microbe Sensing from Anti-pathogen Inflammatory Responses
Gottschalk R, Martins A, Angermann B, Dutta B, Ng C, Uderhardt S, Tsang J, Fraser I, Meier-Schellersheim M, Germain R. Distinct NF-κB and MAPK Activation Thresholds Uncouple Steady-State Microbe Sensing from Anti-pathogen Inflammatory Responses. Cell Systems 2016, 2: 378-390. PMID: 27237739, PMCID: PMC4919147, DOI: 10.1016/j.cels.2016.04.016.Peer-Reviewed Original ResearchConceptsNF-κBMAPK activationInflammatory mediator productionSet of genesInnate immune response systemNF-κB signalingInnate immune systemSwitch-like mannerMacrophage functional responsesImmune response systemInflammatory mediatorsTLR4 ligandMediator productionInflammatory responseMicrobial stimuliInnate responseImmune systemMAPK signalingMacrophage primingLigand sensitivityHuman macrophagesInverse correlationInvasive pathogensSingle receptorGenesCombinatorial effects of odorants on mouse behavior
Saraiva L, Kondoh K, Ye X, Yoon K, Hernandez M, Buck L. Combinatorial effects of odorants on mouse behavior. Proceedings Of The National Academy Of Sciences Of The United States Of America 2016, 113: e3300-e3306. PMID: 27208093, PMCID: PMC4988607, DOI: 10.1073/pnas.1605973113.Peer-Reviewed Original ResearchConceptsTrace amine-associated receptorsOdor aversionBehavioral effectsInstinctive behavioral responsesBinary odor mixturesEffects of odorsOdorant receptorsAversive responsesPredator odorMouse behaviorOdor stimuliOdor mixturesOdor responsesOdor perceptionReceptor antagonismBehavioral responsesOdor detectionSingle receptorSensory inputInstinctive behaviorAversionOdorStereotyped natureReceptor inputMouse nose
This site is protected by hCaptcha and its Privacy Policy and Terms of Service apply