2023
Impact of motion correction on [18F]-MK6240 tau PET imaging
Tiss A, Marin T, Chemli Y, Spangler-Bickell M, Gong K, Lois C, Petibon Y, Landes V, Grogg K, Normandin M, Becker A, Thibault E, Johnson K, Fakhri G, Ouyang J. Impact of motion correction on [18F]-MK6240 tau PET imaging. Physics In Medicine And Biology 2023, 68: 105015. PMID: 37116511, PMCID: PMC10278956, DOI: 10.1088/1361-6560/acd161.Peer-Reviewed Original ResearchConceptsMotion correctionPET quantitationImpact of motion correctionList-mode reconstructionMotion correction methodList-mode dataMotion-corrected imagesEffect of motion correctionVoxel displacementsPhantom experimentsOptical tracking dataLong acquisitionBrain PET scansSlow motionImage qualityPET imagingPositron emission tomographyCorrectionMotionCorrection methodRates of tau accumulationHead motionMotion metricsPhantomPositron
2021
Impact of reconstruction parameters on lesion detection and localization in joint ictal/inter-ictal SPECT reconstruction
Onwanna J, Chantadisai M, Tepmongkol S, Fahey F, Ouyang J, Rakvongthai Y. Impact of reconstruction parameters on lesion detection and localization in joint ictal/inter-ictal SPECT reconstruction. Annals Of Nuclear Medicine 2021, 36: 24-32. PMID: 34559366, DOI: 10.1007/s12149-021-01680-x.Peer-Reviewed Original ResearchConceptsLocalization receiver operating characteristicsDetection performanceSubtraction methodJoint methodOptimization iterationsLesion detection performanceSPECT reconstructionEpileptic focus localizationLocalization receiver operating characteristic curvesDifferential imagingInter-ictalLesion detectionIterationPhantom dataConventional subtraction methodPerformanceImagesPatient datasetsReconstruction parametersImpact of reconstruction parametersFocus localizationSubtractionDetectionSPECT dataJoint reconstructionDetecting lumbar lesions in 99mTc‐MDP SPECT by deep learning: Comparison with physicians
Petibon Y, Fahey F, Cao X, Levin Z, Sexton‐Stallone B, Falone A, Zukotynski K, Kwatra N, Lim R, Bar‐Sever Z, Chemli Y, Treves S, Fakhri G, Ouyang J. Detecting lumbar lesions in 99mTc‐MDP SPECT by deep learning: Comparison with physicians. Medical Physics 2021, 48: 4249-4261. PMID: 34101855, DOI: 10.1002/mp.15033.Peer-Reviewed Original ResearchConceptsSingle-photon emission computed tomographyLow back painLumbar lesionsPediatric patientsTc-MDPEvaluate low back painCause of low back painTc-MDP scanLesion-presentEmission computed tomographyConvolutional neural networkClinical likelihoodBack painInterreader variabilityDeep convolutional neural networkLumbar locationLesionsStress lesionsFocal lesionsDeep learningPatientsLumbar stressPhysiciansDL systemsLROC studiesQuantitative PET in the 2020s: a roadmap
Meikle S, Sossi V, Roncali E, Cherry S, Banati R, Mankoff D, Jones T, James M, Sutcliffe J, Ouyang J, Petibon Y, Ma C, El Fakhri G, Surti S, Karp J, Badawi R, Yamaya T, Akamatsu G, Schramm G, Rezaei A, Nuyts J, Fulton R, Kyme A, Lois C, Sari H, Price J, Boellaard R, Jeraj R, Bailey D, Eslick E, Willowson K, Dutta J. Quantitative PET in the 2020s: a roadmap. Physics In Medicine And Biology 2021, 66: 06rm01. PMID: 33339012, PMCID: PMC9358699, DOI: 10.1088/1361-6560/abd4f7.Peer-Reviewed Original ResearchMeSH KeywordsArtificial IntelligenceHistory, 20th CenturyHistory, 21st CenturyHumansImage Processing, Computer-AssistedImaging, Three-DimensionalKineticsMedical OncologyNeoplasmsPositron Emission Tomography Computed TomographyPositron-Emission TomographyPrognosisRadiopharmaceuticalsSystems BiologyTomography, X-Ray ComputedConceptsTime-of-flight positron emission tomographyStatistical image reconstructionTotal-body positron emission tomographyPositron emission tomographyQuantitative positron emission tomographyImage reconstructionWhole-body positron emission tomographySensitivity of positron emission tomographyCapabilities of positron emission tomographyImage qualityClinical applicationTracer principleRelevant parametersOncology applicationsPhysicsStatistical qualityExpansion of applicationsEmission tomographyClinical practicePET/MRBiologically relevant parametersSensitive biomarkerPositron
2020
Motion correction for PET data using subspace-based real-time MR imaging in simultaneous PET/MR
Marin T, Djebra Y, Han P, Chemli Y, Bloch I, Fakhri G, Ouyang J, Petibon Y, Ma C. Motion correction for PET data using subspace-based real-time MR imaging in simultaneous PET/MR. Physics In Medicine And Biology 2020, 65: 235022. PMID: 33263317, PMCID: PMC7985095, DOI: 10.1088/1361-6560/abb31d.Peer-Reviewed Original ResearchConceptsPositron emission tomography reconstructionMotion-corrected PET reconstructionsPET reconstructionMotion-corrected PET imagesIrregular respiratory motionMotion fieldMotion correction methodMotion correction approachIrregular motion patternsUndersampled k-space dataImage quality of positron emission tomographyQuality of positron emission tomographyMotion patternsLow-rank characteristicsRespiratory motionContrast-to-noise ratioEstimated motion fieldSurrogate signalsMotion correctionK-space dataImage qualityReal-time MR imagingSimultaneous PET/MRMotion artifact reductionPET/MR scannersPET imaging of neurotransmission using direct parametric reconstruction
Petibon Y, Alpert N, Ouyang J, Pizzagalli D, Cusin C, Fava M, Fakhri G, Normandin M. PET imaging of neurotransmission using direct parametric reconstruction. NeuroImage 2020, 221: 117154. PMID: 32679252, PMCID: PMC7800040, DOI: 10.1016/j.neuroimage.2020.117154.Peer-Reviewed Original ResearchConceptsSignal-to-noise ratioImage reconstructionPositron emission tomography image reconstructionLow signal-to-noise ratioPoisson log-likelihood functionScattered coincidencesDetector sensitivityPET sinogramsStatistical fluctuationsEstimate parametric imagesGradient-based optimizationParametric reconstructionLog-likelihood functionEffects of head movementVoxel scalePositron emission tomographySimplified reference region modelActivity concentration dataMR‐based PET attenuation correction using a combined ultrashort echo time/multi‐echo Dixon acquisition
Han P, Horng D, Gong K, Petibon Y, Kim K, Li Q, Johnson K, Fakhri G, Ouyang J, Ma C. MR‐based PET attenuation correction using a combined ultrashort echo time/multi‐echo Dixon acquisition. Medical Physics 2020, 47: 3064-3077. PMID: 32279317, PMCID: PMC7375929, DOI: 10.1002/mp.14180.Peer-Reviewed Original ResearchConceptsLinear attenuation coefficientPositron emission tomography attenuation correctionPhysical compartmental modelAttenuation correctionShort T<sub>2</sub> componentPET attenuation correctionRadial k-space trajectoryMagnetic resonance (MR)-based methodK-space trajectoriesRadial trajectoryK-spaceAttenuation coefficientDixon acquisitionsPositron emission tomographyWhole white matterMuting methodImage reconstructionImaging speedMR signalMRAC methodPositron emission tomography imagingCorrectionGray matter regionsPhantomMatter regionsDependence of fluorodeoxyglucose (FDG) uptake on cell cycle and dry mass: a single-cell study using a multi-modal radiography platform
Sung Y, Tetrault M, Takahashi K, Ouyang J, Pratx G, Fakhri G, Normandin M. Dependence of fluorodeoxyglucose (FDG) uptake on cell cycle and dry mass: a single-cell study using a multi-modal radiography platform. Scientific Reports 2020, 10: 4280. PMID: 32152343, PMCID: PMC7062696, DOI: 10.1038/s41598-020-59515-0.Peer-Reviewed Original ResearchConceptsCell divisionHeLa cellsDry massM phaseCell dry massCancer compared to normal tissuesCell cycle phasesHouse-keeping proteinsSingle-cell studiesSingle-cell levelIncreased dry massProliferation indexCell cycleG1 phaseProportion of cellsHigher glucose uptakeFluorodeoxyglucose uptakeGlucose uptakeHeLaUptake rate
2019
Body motion detection and correction in cardiac PET: Phantom and human studies
Sun T, Petibon Y, Han P, Ma C, Kim S, Alpert N, Fakhri G, Ouyang J. Body motion detection and correction in cardiac PET: Phantom and human studies. Medical Physics 2019, 46: 4898-4906. PMID: 31508827, PMCID: PMC6842053, DOI: 10.1002/mp.13815.Peer-Reviewed Original ResearchConceptsList-mode dataMotion-compensated image reconstructionMotion correctionCenter of massPET list-mode dataMotion correction methodMotion detectionMotion estimationImage reconstructionPatient body motionDegrade image qualityNonrigid registrationImage qualityMotion transformationCoincident distributionBody motion detectionCardiac positron emission tomographyBack-projection techniqueCovariance matrixImage volumesBody motionPositron emission tomographyBack-projectionReference framePhantomMR-based cardiac and respiratory motion correction of PET: application to static and dynamic cardiac 18F-FDG imaging
Petibon Y, Sun T, Han P, Ma C, Fakhri G, Ouyang J. MR-based cardiac and respiratory motion correction of PET: application to static and dynamic cardiac 18F-FDG imaging. Physics In Medicine And Biology 2019, 64: 195009. PMID: 31394518, PMCID: PMC7007962, DOI: 10.1088/1361-6560/ab39c2.Peer-Reviewed Original ResearchConceptsMR-based motion correctionRespiratory motion correctionMotion correctionImproved spatial resolutionReconstructed activity concentrationCardiac PET dataSpatial resolutionCoincidence eventsMR-basedPET imagingContrast-to-noise ratioCardiac PET imagingRespiratory phasesMC dataImprove image qualityMR acquisitionQuantitative accuracyCardiac PETPET dataActivity concentrationsMyocardium wallF-FDG PETDynamics studiesImage qualityMotion artifacts
2018
Joint reconstruction of rest/stress myocardial perfusion SPECT
Lai X, Petibon Y, Fakhri G, Ouyang J. Joint reconstruction of rest/stress myocardial perfusion SPECT. Physics In Medicine And Biology 2018, 63: 135019. PMID: 29897044, PMCID: PMC6245543, DOI: 10.1088/1361-6560/aacc2f.Peer-Reviewed Original ResearchConceptsMyocardial perfusion imagingSingle photon emission computed tomographyReversible defectsSignal-to-noise ratioRest/stress SPECT myocardial perfusion imagingSPECT myocardial perfusion imagingConventional subtraction methodDefect detectionJoint methodPhoton emission computed tomographySubtraction methodReverse mappingClinical dose levelsEmission computed tomographyImprove defect detectionLow noiseNon-invasive assessmentClinical dosePerfusion defectsReduced doseImprove radiologists' performanceReconstruction frameworkRest imagesPerfusion imagingDose levels
2017
Joint reconstruction of Ictal/inter‐ictal SPECT data for improved epileptic foci localization
Rakvongthai Y, Fahey F, Borvorntanajanya K, Tepmongkol S, Vutrapongwatana U, Zukotynski K, Fakhri G, Ouyang J. Joint reconstruction of Ictal/inter‐ictal SPECT data for improved epileptic foci localization. Medical Physics 2017, 44: 1437-1444. PMID: 28211105, PMCID: PMC5462456, DOI: 10.1002/mp.12167.Peer-Reviewed Original ResearchConceptsSPECT reconstruction methodDifferential imagingLow-noise datasetConventional subtraction methodLesion contrastSPECT projection dataEpileptic focus localizationHoffman phantomPatient studiesReconstruction methodJoint methodSPECT projectionsHead phantomPhantom locationsSubtraction methodPhantom studyNuclear medicine physiciansAttenuation backgroundPhantomConventional subtraction approachFocus localizationConventional subtractionReceiver operating characteristicLow noiseProjection data
2016
Investigation of cone-beam CT image quality trade-off for image-guided radiation therapy
Bian J, Sharp G, Park Y, Ouyang J, Bortfeld T, Fakhri G. Investigation of cone-beam CT image quality trade-off for image-guided radiation therapy. Physics In Medicine And Biology 2016, 61: 3317-3346. PMID: 27032676, DOI: 10.1088/0031-9155/61/9/3317.Peer-Reviewed Original ResearchConceptsImage-guided radiation therapyCone-beam CTFiltered-backprojectionImage quality trade-offConventional filtered-backprojectionShort-scan reconstructionsFiltered-backprojection algorithmFan-beam reconstructionTV-based algorithmIterative reconstruction algorithmCatphan phantomRadiation therapyAngular rangeTotal-variationOptimal exposure levelClinical scannerScanning configurationReconstruction algorithmImaging conditionsCatphanPhantomExposure levelsTherapyConfigurationRange
2015
National Electrical Manufacturers Association and Clinical Evaluation of a Novel Brain PET/CT Scanner
Grogg K, Toole T, Ouyang J, Zhu X, Normandin M, Li Q, Johnson K, Alpert N, Fakhri G. National Electrical Manufacturers Association and Clinical Evaluation of a Novel Brain PET/CT Scanner. Journal Of Nuclear Medicine 2015, 57: 646-652. PMID: 26697961, PMCID: PMC4818715, DOI: 10.2967/jnumed.115.159723.Peer-Reviewed Original ResearchConceptsNoise-equivalent count rateCount rateLoose cutsMaximum noise-equivalent counting rateSpatial resolutionDetector ringSilicon photomultipliersBrain phantomContrast recoveryAttenuation correctionPET/CT systemCrystal blockPET/CT scannerImage qualityRadial offsetNational Electrical Manufacturers AssociationActivity distributionUnique mobility capabilitiesAxial extentTransverse resolutionPhantomAxial resolutionActivity concentrationsHuman scansLayer 1 cmContinuous MR bone density measurement using water- and fat-suppressed projection imaging (WASPI) for PET attenuation correction in PET-MR
Huang C, Ouyang J, Reese T, Wu Y, Fakhri G, Ackerman J. Continuous MR bone density measurement using water- and fat-suppressed projection imaging (WASPI) for PET attenuation correction in PET-MR. Physics In Medicine And Biology 2015, 60: n369-n381. PMID: 26405761, PMCID: PMC4607313, DOI: 10.1088/0031-9155/60/20/n369.Peer-Reviewed Original ResearchConceptsAttenuation correctionUltrashort echo timeMR-based attenuation correctionProjection imagesPET attenuation correctionMR attenuation correctionPET-MRPulse sequenceEcho timeDensity variationsPET imagingCorrectionBone density variationWASPIDensity measurementsAttenuation variationsPhantomMR sequencesLack of signalPulseAttenuationAccelerated acquisition of tagged MRI for cardiac motion correction in simultaneous PET‐MR: Phantom and patient studies
Huang C, Petibon Y, Ouyang J, Reese T, Ahlman M, Bluemke D, El Fakhri G. Accelerated acquisition of tagged MRI for cardiac motion correction in simultaneous PET‐MR: Phantom and patient studies. Medical Physics 2015, 42: 1087-1097. PMID: 25652521, PMCID: PMC4312342, DOI: 10.1118/1.4906247.Peer-Reviewed Original ResearchConceptsPET motion correctionMotion correctionSimultaneous PET-MRTMR dataPET list-mode dataPET-MRList-mode dataCardiac motion correctionPET-MR scannersImage qualityParallel imagingAcquisition timePET imagingRespiratory motionCompressive sensingMotion fieldAttenuation correctionDefect contrastModerate acceleration factorsDegradation of image qualityTagged MRCardiac phantomLong acquisition timesPhantomAccurate motion field
2014
Sparse-View Spectral CT Reconstruction Using Spectral Patch-Based Low-Rank Penalty
Kim K, Ye J, Worstell W, Ouyang J, Rakvongthai Y, Fakhri G, Li Q. Sparse-View Spectral CT Reconstruction Using Spectral Patch-Based Low-Rank Penalty. IEEE Transactions On Medical Imaging 2014, 34: 748-760. PMID: 25532170, DOI: 10.1109/tmi.2014.2380993.Peer-Reviewed Original ResearchConceptsLow-rank penaltySelf-similarity of patchesLog-likelihoodPoisson log-likelihoodCost functionSpectral CT reconstructionOriginal cost functionGPU implementationAlternating minimizationSensitive to intensity changesConventional algorithmsSpectral imagingEdge directionComputational costProcedure algorithmComputational advantagesAlgorithmX-ray transmissionComputer simulationsOptimization methodSpectral computed tomographySelf-similarityCT reconstructionX-rayGPU4D numerical observer for lesion detection in respiratory‐gated PET
Lorsakul A, Li Q, Trott C, Hoog C, Petibon Y, Ouyang J, Laine A, Fakhri G. 4D numerical observer for lesion detection in respiratory‐gated PET. Medical Physics 2014, 41: 102504. PMID: 25281979, PMCID: PMC4281099, DOI: 10.1118/1.4895975.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsComputer SimulationFluorodeoxyglucose F18HumansImage Interpretation, Computer-AssistedLung DiseasesModels, BiologicalMonte Carlo MethodMotionPhantoms, ImagingPositron-Emission TomographyRadiopharmaceuticalsRegression AnalysisRespiratory-Gated Imaging TechniquesSignal-To-Noise RatioConceptsRespiratory-gated positron emission tomographyMotion-corrected imagesDetection signal-to-noise ratioLesion detection taskNumerical observationsLesion detection performanceSignal-to-noise ratioPositron emission tomography sinogramsSpherical lesionsHotelling observerMotion correction methodPositron emission tomographyGeant4 ApplicationTomographic EmissionChannelized Hotelling observerAnthropomorphic phantomScanner geometryOSEM algorithmMonte Carlo simulationsPET framesImprove lesion detectionLesion detectionSignal-to-noise ratio measurementsActivity distributionConventional 3D approachSpectral CT Using Multiple Balanced K-Edge Filters
Rakvongthai Y, Worstell W, Fakhri G, Bian J, Lorsakul A, Ouyang J. Spectral CT Using Multiple Balanced K-Edge Filters. IEEE Transactions On Medical Imaging 2014, 34: 740-747. PMID: 25252276, PMCID: PMC4349342, DOI: 10.1109/tmi.2014.2358561.Peer-Reviewed Original ResearchConceptsK-edge filtersReconstructed attenuation coefficientsEnergy binsAttenuation coefficientMultiple energy binsX-ray sourcesX-ray tubeBack-projection reconstructionSpectral CT imagingTransmission matrixModel expectationsSinogram binsBeam hardeningComplex phantomsSpectral computed tomographyK-edgeAttenuation imagesSpectral CTCT scannerX-rayConventional detectorsBack-projectionSinogramPhantomCost-effective system designEffect of time‐of‐flight and point spread function modeling on detectability of myocardial defects in PET
Schaefferkoetter J, Ouyang J, Rakvongthai Y, Nappi C, El Fakhri G. Effect of time‐of‐flight and point spread function modeling on detectability of myocardial defects in PET. Medical Physics 2014, 41: 062502. PMID: 24877836, PMCID: PMC4032408, DOI: 10.1118/1.4875725.Peer-Reviewed Original ResearchConceptsSignal-to-noise ratioDetection signal-to-noise ratioPoint spread functionObserver signal-to-noise ratioEffects of time-of-flightMyocardial defectsHuman observer performanceDefect detectionSlow convergenceTime-of-flight (TOFNon-PSFPostreconstruction smoothingFDG-PET dataTime-of-flightPSF reconstructionCombination of TOFNon-TOFIterationObserver performanceClinical practiceSpread functionReconstruction parametersReconstruction protocolsIterative methodDetection