FAVOR-GPT: a generative natural language interface to whole genome variant functional annotations
Li T, Zhou H, Verma V, Tang X, Shao Y, Van Buren E, Weng Z, Gerstein M, Neale B, Sunyaev S, Lin X. FAVOR-GPT: a generative natural language interface to whole genome variant functional annotations. Bioinformatics Advances 2024, 4: vbae143. PMID: 39387060, PMCID: PMC11461909, DOI: 10.1093/bioadv/vbae143.Peer-Reviewed Original ResearchVariant functional annotationFunctional annotationNatural language interfaceFunctional annotation dataDisease-associated variantsLanguage interfaceWhole genomeFunctional prioritizationGenomeUser promptsRetrieval frameworkLanguage modelRaw annotationsAnnotated dataAnnotationUsersRetrievalOnline resourcesChatbotInformation interpretationUsabilityVariantsDatabase