2011
Evolving Genomic Approaches to Idiopathic Pulmonary Fibrosis: Moving Beyond Genes
Kass DJ, Kaminski N. Evolving Genomic Approaches to Idiopathic Pulmonary Fibrosis: Moving Beyond Genes. Clinical And Translational Science 2011, 4: 372-379. PMID: 22029812, PMCID: PMC3229869, DOI: 10.1111/j.1752-8062.2011.00287.x.Peer-Reviewed Original ResearchConceptsGenomic technologiesIdiopathic pulmonary fibrosisPathogenesis of diseaseGenomic discoveriesSystems biology approachGene expression profilingContribution of microRNAsMost human diseasesGenomic approachesGene networksBiology approachHuman genomeEpigenetic researchGenomic dataExpression profilingHuman diseasesPulmonary fibrosisDiagnosis of IPFGenesLarge collaborative studiesProgressive scarringPeripheral bloodClinical severityLung parenchymaTherapeutic goals
2008
Carbon Monoxide Modulates α–Smooth Muscle Actin and Small Proline Rich-1a Expression in Fibrosis
Zheng L, Zhou Z, Lin L, Alber S, Watkins S, Kaminski N, Choi AM, Morse D. Carbon Monoxide Modulates α–Smooth Muscle Actin and Small Proline Rich-1a Expression in Fibrosis. American Journal Of Respiratory Cell And Molecular Biology 2008, 41: 85-92. PMID: 19097987, PMCID: PMC2701963, DOI: 10.1165/rcmb.2007-0401oc.Peer-Reviewed Original ResearchMeSH KeywordsActinsAdministration, InhalationAnimalsBleomycinBone DevelopmentCarbon MonoxideCell DeathCell MovementCells, CulturedCornified Envelope Proline-Rich ProteinsDisease Models, AnimalDose-Response Relationship, DrugExtracellular Signal-Regulated MAP KinasesFibroblastsGene Expression ProfilingLungMaleMAP Kinase Signaling SystemMiceMice, Inbred C57BLMuscle DevelopmentOrganometallic CompoundsPulmonary FibrosisTime FactorsTransforming Growth Factor beta1UbiquitinationConceptsExtracellular signal-regulated kinase (ERK) pathwayCategories of genesSignal-regulated kinase pathwayNovel transcriptional targetMuscular system developmentGene expression profilingMurine bleomycin modelStress-inducible enzymeTranscriptional targetsAlpha-smooth muscle actin expressionExpression profilingKinase pathwayMuscle actin expressionΑ-smooth muscle actinEffects of COActin expressionGrowth factorHeme oxygenaseExpressionMuscle actinActive moleculesGenesOxygenaseProteinActin
2006
Gene Expression Profiling as a Window into Idiopathic Pulmonary Fibrosis Pathogenesis
Kaminski N, Rosas IO. Gene Expression Profiling as a Window into Idiopathic Pulmonary Fibrosis Pathogenesis. Annals Of The American Thoracic Society 2006, 3: 339-344. PMID: 16738198, PMCID: PMC2658685, DOI: 10.1513/pats.200601-011tk.Peer-Reviewed Original ResearchConceptsIdiopathic pulmonary fibrosisModel of IPFIdiopathic pulmonary fibrosis (IPF) pathogenesisPulmonary fibrosis pathogenesisMinority of investigatorsPulmonary fibrosisFibrosis pathogenesisGene expression profilingMultiple diseasesExpression microarraysExpression profilingGene expressionMicroarrayIntegrative systems approach
2004
Gene expression profiling of in vivo UVB‐irradiated human epidermis
Enk CD, Shahar I, Amariglio N, Rechavi G, Kaminski N, Hochberg M. Gene expression profiling of in vivo UVB‐irradiated human epidermis. Photodermatology Photoimmunology & Photomedicine 2004, 20: 129-137. PMID: 15144390, DOI: 10.1111/j.1600-0781.2004.00097.x.Peer-Reviewed Original ResearchConceptsGlobal gene expression analysisGene expression patternsGene expression analysisGene expression profilingIntact human epidermisOligonucleotide microarray technologyNumerous genesFunctional categoriesExpression analysisExpression profilingExpression patternsGene expressionBiological processesMicroarray profilingDifferential expressionDifferential regulationMicroarray technologyGenesMolecular pathwaysCultured cellsRNA samplesHuman epidermisUV-induced photodamageSemi-quantitative reverse transcriptase-polymerase chain reactionIntact tissue