Kim Blenman, PhD, MS
Cards
About
Titles
Assistant Professor of Medicine (Medical Oncology) and Assistant Professor of Computer Science
Biography
Kim RM Blenman, PhD, MS is an immunologist, clinical chemist, and computer scientist who uses and develops novel software tools to understand the mechanisms responsible for disparities in disease pathogenesis and therapeutic response. She earned a doctorate in immunology, a master's in clinical chemistry, and a bachelor's in chemistry from the University of Florida. Her research at that time focused on the autoimmune disease Systemic Lupus Erythematosus.
Dr Blenman also has a certificate in Drug Development and Regulatory Sciences from the University of California San Francisco. She had the privilege of learning and working on drug discovery and clinical development at Procter & Gamble's Pharmaceutical division as a senior scientist and as a global research director for autoimmune diseases Inflammatory Bowel Disease and Irritable Bowel Syndrome.
As a Scientist focused on clinical research, her interest in cancer, therapeutic development, and health disparities prompted her to re-enter academia and leverage her learnings from the pharmaceutical industry. She re-entered academia as a traditional Postdoctoral Fellow at the City of Hope Comprehensive Cancer Center in California. During her fellowship, she uncovered a potential use for B cells in predicting disease-free survival in breast cancer patients. In collaboration with Cambridge Research Institute/Perkin Elmer (now Akoya Bioscience), Dr Blenman also helped to develop the Vectra Quantitative Multispectral Imaging System for immunology applications.
Dr Blenman is currently an Assistant Professor in the Yale School of Medicine Department of Internal Medicine Section of Medical Oncology and the Yale Cancer Center. Dr Blenman is also an Assistant Professor in the Yale School of Engineering and Applied Science Department of Computer Science. She has publications in melanoma suggesting that along with other immune cells, B cell and neutrophils may have a role in tumor regression and immunotherapy response (anti-PD-1, anti-CTLA-4, and/or combination) in murine models and in patients. She also has publications in methods, software tool workflow, and data standards for flow cytometry and high complexity histology in collaboration with TissueGnostics (StrataFAX platform with StrataQuest Software). She is currently working on several breast cancer clinical studies interrogating the immune components of the tumor microenvironment of patients treated with chemotherapy and/or immunotherapy and patients of different ancestries. For these studies, Dr Blenman is interested in understanding and identifying specific immune mechanisms that are responsible for disparities in therapeutic efficacy and toxicity.
Additionally, Dr Blenman is also an active academic citizen. She mentors Postdocs and undergraduates internally and external to Yale. She helps to find ways to support equity and diversity for Yale Faculty as member of the Steering and Council for the Yale University Women Faculty Forum, as an Executive Board Member of the Yale School of Medicine Committee on the Status of Women in Medicine, and as a member of the Executive Committee of the Yale School of Medicine Minority Organization for Recruitment and Expansion.
Her academic citizenship also expands beyond Yale in the areas of Flow cytometry and Pathology. Flow cytometry is an exquisite approach to identifying the contents of any solid tissue or blood microenvironment as well as components of bacteria and plants. Dr Blenman has been an active member of the International Society for the Advancement of Cytometry (ISAC) Data Standards Task Force since 2009. The Task Force develops flow cytometry related data standards and file formats to facilitate software and hardware interoperability for research and clinical applications. Current standards and recommendations include FCS, Gating-ML, MIFlowCyt, NetCDF, and ACS.
The Flow Cytometry Standard (FCS) is the primary interchange format for flow cytometry data. All cytometer manufacturers support iterations up to the current version (FCS 3.1). The ISAC Data Standards Task Force recently released the new FCS 3.2 specifications and published a new nomenclature for probe tags (GitHub - ISAC-DSTF/ProbeTagDictionary: Standardized Nomenclature for Detection and Visualization Labels Used in Cytometry and Microscopy Imaging). We are currently working on FCS 4.0 which will focus on incorporating multispectral cytometry standards into the specification. Gating-ML is an XML-based mechanism used to describe gates including encoding, data transformations, and compensation. Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) standard defines the minimum information required to report flow cytometry experiments. Network Common Data Form (NetCDF) data format is the next generation of the FCS standards for storing and retrieving Big Data in the form of n-dimensional arrays. Archival Cytometry Standard (ACS) supports bundling of data with different components describing cytometry experiments.
Histology is a pathologist’s and clinician’s first step to diagnosing and monitoring many diseases. In clinical practice, histological analysis of immune cells in solid tissue is now required for diagnosis, therapeutic selection, and therapeutic monitoring of many diseases including cancer. The morphological pattern, quantity, and quality of stromal tumor infiltrating lymphocytes (sTILs) are key to histological analysis. Dr Blenman is an active member of the International Immuno-Oncology Biomarker Working Group. The purpose of the working group is to propose scientific strategies regarding the standardization, validation, and clinical utility of immune-oncology biomarkers. We have recently published articles that describe (1) the pitfalls of assessing sTILs, (2) a risk management framework of integrating sTILs into clinical trials, and (3) opportunities to use computational methods on sTILs images to identify and extract morphologic features.
Appointments
Medical Oncology
Assistant ProfessorPrimary
Other Departments & Organizations
Education & Training
- Postdoctoral Fellow
- City of Hope Comprehensive Cancer Center (2014)
- Fellowship
- University of California – College of Medicine, San Francisco (2009)
- PhD
- University of Florida College of Medicine (2005)
- MS
- University of Florida College of Medicine (2000)
Research
Academic Achievements and Community Involvement
Links & Media
Media
Dr Blenman's Computational Histology Approach Featured on the Cover of Cytometry April 2019 Volume 95A Issue 4
Kim R.M. Blenman* and Marcus W. Bosenberg. Immune cell and cell cluster phenotyping, quantitation, and visualization using in silico multiplexed images and tissue cytometry. Cytometry A, 2019. PMID: 30468565. [*Corresponding Author].Analysis of Breast Cancer Patient Lymph Nodes Segmented into their Anatomical and Functional Compartments.
Details of the general method are found in the following publication: Kim RM Blenman and Peter P Lee. Quantitative and Spatial Image Analysis of Tumor and Draining Lymph Nodes Using Immunohistochemistry and High-Resolution Multispectral Imaging to Predict Metastasis. Molecular Diagnostics for Melanoma: Emerging technologies for marker validation (Part 7). Methods in Molecular Biology (eds. Magdalena Thurin & Francesco Marincola), published by Springer Press, USA. 1102: 601 – 621, 2014. PMID:24259001.Breast Cancer Patients Sentinel Lymph Node 5-color Chromogen-Based Immunohistochemistry.
Kim RM Blenman, Ting-Fang He, Paul H Frankel, Nora H Ruel, Erich J Schwartz, David N Krag, Lee K Tan, John H Yim, Joanne E Mortimer, Yuan, and Peter P Lee. Sentinel lymph node B cells can predict disease-free survival breast cancer patients. npj Breast Cancer, 2018. PMID: 30155518.Melanoma Patients with Higher Numbers of CD20+ B cells have Longer Progression-Free Survival after anti-PD-1 Immunotherapy.
Pok Fai Wong, MD, MPhil, Wei, MD, PhD, James W. Smithy, MD, MHS, Balazs Acs, MD, Maria I. Toki, MD, Kim R.M. Blenman, PhD, MS, Daniel Zelterman, PhD, Harriet M. Kluger, MD, David L. Rimm, MD, PhD. Multiplex quantitative analysis of tumor-infiltrating lymphocytes and immunotherapy outcome in metastatic melanoma. Clinical Cancer Research, 2019. PMID: 30617133.Ki67 Computational Histology using a Mouse Model of Melanoma.
Kim R.M. Blenman* and Marcus W. Bosenberg. Immune cell and cell cluster phenotyping, quantitation, and visualization using in silico multiplexed images and tissue cytometry. Cytometry A, 2019. PMID: 30468565. [*Corresponding Author].Computational Histology Flow Cytometry-like Scatterplots from a Mouse Model of Melanoma.
Kim R.M. Blenman* and Marcus W. Bosenberg. Immune cell and cell cluster phenotyping, quantitation, and visualization using in silico multiplexed images and tissue cytometry. Cytometry A, 2019. PMID: 30468565. [*Corresponding Author].Computational Histology Phenotype Masks from a Mouse Model of Melanoma.
Kim R.M. Blenman* and Marcus W. Bosenberg. Immune cell and cell cluster phenotyping, quantitation, and visualization using in silico multiplexed images and tissue cytometry. Cytometry A, 2019. PMID: 30468565. [*Corresponding Author].Breast Cancer Patients with Higher Density of CD20+ B cells have Longer Disease-Free Survival.
Kim RM Blenman, Ting-Fang He, Paul H Frankel, Nora H Ruel, Erich J Schwartz, David N Krag, Lee K Tan, John H Yim, Joanne E Mortimer, Yuan, and Peter P Lee. Sentinel lymph node B cells can predict disease-free survival breast cancer patients. npj Breast Cancer, 2018. PMID: 30155518.B cell, Neutrophil, and Neutrophil Extracellular Traps (NETs)-like Formation after anti-PD-1 and anti-PD-1/anti-CTLA-4 treatment in a Mouse Model of Melanoma.
Kim RM Blenman*, Jake Wang, Shawn Cowper, and Marcus Bosenberg*. Pathology of Spontaneous and Immunotherapy-Induced Tumor Regression in a Murine Model of Melanoma. Pigment Cell & Melanoma Research, 2019. PMID: 30702217. [Corresponding Author*]B cell, Neutrophil, and Neutrophil Extracellular Traps (NETs)-like Formation after anti-CTLA-4 treatment in a Mouse Model of Melanoma.
Kim RM Blenman*, Jake Wang, Shawn Cowper, and Marcus Bosenberg*. Pathology of Spontaneous and Immunotherapy-Induced Tumor Regression in a Murine Model of Melanoma. Pigment Cell & Melanoma Research, 2019. PMID: 30702217. [Corresponding Author*]
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