2014
Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis
Initiative I, Attardo G, Abila P, Auma J, Baumann A, Benoit J, Brelsfoard C, Ribeiro J, Cotton J, Pham D, Darby A, Van Den Abbeele J, Denlinger D, Field L, Nyanjom S, Gaunt M, Geiser D, Gomulski L, Haines L, Hansen I, Jones J, Kibet C, Kinyua J, Larkin D, Lehane M, Rio R, Macdonald S, Macharia R, Malacrida A, Marco H, Marucha K, Masiga D, Meuti M, Mireji P, Obiero G, Koekemoer J, Okoro C, Omedo I, Osamor V, Balyeidhusa A, Peyton J, Price D, Quail M, Ramphul U, Rawlings N, Riehle M, Robertson H, Sanders M, Scott M, Dashti Z, Snyder A, Srivastava T, Stanley E, Swain M, Hughes D, Tarone A, Taylor T, Telleria E, Thomas G, Walshe D, Wilson R, Winzerling J, Acosta-Serrano A, Aksoy S, Arensburger P, Aslett M, Bateta R, Benkahla A, Berriman M, Bourtzis K, Caers J, Caljon G, Christoffels A, Falchetto M, Friedrich M, Fu S, Gäde G, Githinji G, Gregory R, Hall N, Harkins G, Hattori M, Hertz-Fowler C, Hide W, Hu W, Imanishi T, Inoue N, Jonas M, Kawahara Y, Koffi M, Kruger A, Lawson D, Lehane S, Lehväslaiho H, Luiz T, Makgamathe M, Malele I, Manangwa O, Manga L, Megy K, Michalkova V, Mpondo F, Mramba F, Msangi A, Mulder N, Murilla G, Mwangi S, Okedi L, Ommeh S, Ooi C, Ouma J, Panji S, Ravel S, Rose C, Sakate R, Schoofs L, Scolari F, Sharma V, Sim C, Siwo G, Solano P, Stephens D, Suzuki Y, Sze S, Touré Y, Toyoda A, Tsiamis G, Tu Z, Wamalwa M, Wamwiri F, Wang J, Warren W, Watanabe J, Weiss B, Willis J, Wincker P, Zhang Q, Zhou J. Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis. Science 2014, 344: 380-386. PMID: 24763584, PMCID: PMC4077534, DOI: 10.1126/science.1249656.Peer-Reviewed Original ResearchConceptsGenome sequenceLactation-specific proteinsProtein-encoding genesBacterial genome sequencesPathogen recognition proteinsTsetse fliesMicrobial symbiosesTsetse biologyViviparous reproductionGenome dataRecognition proteinsSole vectorsChromosomal integrationDisease vectorsAfrican trypanosomiasisGenomeGenesFliesProteinSequenceMultiple aspectsHuman African trypanosomiasisImportant insightsMultiple discoveriesSymbioses
2012
Molecular characterization of Ephestia kuehniella (Lepidoptera: Pyralidae) transferrin and its response to parasitoid Venturia canescens (Hymenoptera: Ichneumonidae Gravenhorst)
Guz N, Kilincer N, Aksoy S. Molecular characterization of Ephestia kuehniella (Lepidoptera: Pyralidae) transferrin and its response to parasitoid Venturia canescens (Hymenoptera: Ichneumonidae Gravenhorst). Insect Molecular Biology 2012, 21: 139-147. PMID: 22229520, DOI: 10.1111/j.1365-2583.2011.01129.x.Peer-Reviewed Original ResearchConceptsInsect transferrinsDeduced amino acid sequenceFull-length cDNAPupal developmental stagesAmino acid sequenceLast larval instarNorthern blot analysisSignificant homologyChilo suppressalisFat bodyAcid sequenceMediterranean flour mothBombyx moriPlutella xylostellaSpodoptera lituraMolecular characterizationLarval instarsMolecular massDevelopmental stagesGalleria mellonellaChoristoneura fumiferanaAmino acidsOvary tissuesVenturia canescensIron-binding protein transferrin
2005
Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host
Toh H, Weiss BL, Perkin SA, Yamashita A, Oshima K, Hattori M, Aksoy S. Massive genome erosion and functional adaptations provide insights into the symbiotic lifestyle of Sodalis glossinidius in the tsetse host. Genome Research 2005, 16: 149-156. PMID: 16365377, PMCID: PMC1361709, DOI: 10.1101/gr.4106106.Peer-Reviewed Original ResearchMeSH KeywordsAdaptation, PhysiologicalAnimalsBase SequenceEnterobacteriaceaeEvolution, MolecularGenes, BacterialMolecular Sequence DataSymbiosisTsetse FliesConceptsHost developmental stageTemporal expression profilesDifferent temporal expression profilesGenome erosionMutualistic lifestylesGene inventorySymbiont infectionSymbiotic lifestyleHost developmentTranscript abundanceMetabolism of carbohydratesFlagellum structureSodalisComplete sequenceExpression profilesSPI-2SPI-1ChromosomesTsetse hostBacterial speciesVeterinary significancePathogenic microbesDevelopmental stagesPseudogenesTsetse flies
2001
Tsetse immune responses and trypanosome transmission: Implications for the development of tsetse-based strategies to reduce trypanosomiasis
Hao Z, Kasumba I, Lehane M, Gibson W, Kwon J, Aksoy S. Tsetse immune responses and trypanosome transmission: Implications for the development of tsetse-based strategies to reduce trypanosomiasis. Proceedings Of The National Academy Of Sciences Of The United States Of America 2001, 98: 12648-12653. PMID: 11592981, PMCID: PMC60108, DOI: 10.1073/pnas.221363798.Peer-Reviewed Original ResearchMeSH KeywordsAmino Acid SequenceAnimalsDefensinsDNA, ComplementaryDrosophila ProteinsImmunity, InnateInsect ProteinsMolecular Sequence DataTransgenesTrypanosomiasisTsetse FliesConceptsFat bodyInsect immune systemAntimicrobial peptide genesFat body tissueImmune responsive genesDifferent life stagesTransgenic approachesResponsive genesAntimicrobial genesImmune responseSubtractive cloningPeptide genesAfrican trypanosomesMolecular signalsImmune systemDifferential regulationInfection processLife stagesTrypanosome transmissionParasite transmissionGenesImportant vectorEscherichia coliBiochemical natureDiptericinGenome Size Determination and Coding Capacity of Sodalis glossinidius, an Enteric Symbiont of Tsetse Flies, as Revealed by Hybridization to Escherichia coliGene Arrays
Akman L, Rio R, Beard C, Aksoy S. Genome Size Determination and Coding Capacity of Sodalis glossinidius, an Enteric Symbiont of Tsetse Flies, as Revealed by Hybridization to Escherichia coliGene Arrays. Journal Of Bacteriology 2001, 183: 4517-4525. PMID: 11443086, PMCID: PMC95346, DOI: 10.1128/jb.183.15.4517-4525.2001.Peer-Reviewed Original ResearchConceptsGenome sizeLong evolutionary timeGenome size determinationSecondary symbiont SodalisAT-rich genomeConserved gene sequencesWhole genome sequencesTsetse fliesEnteric symbiontsObligate symbiontsOrthologous genesRecent molecular characterizationComparative genomicsMicrobial genomesSymbiotic microorganismsEvolutionary timeTsetse fecundityDNA replicationGenome sequenceGenomic aspectsGenomic contentGene sequencesMolecular basisRelated bacteriaExtrachromosomal plasmidsA novel application of gene arrays: Escherichia coli array provides insight into the biology of the obligate endosymbiont of tsetse flies
Akman L, Aksoy S. A novel application of gene arrays: Escherichia coli array provides insight into the biology of the obligate endosymbiont of tsetse flies. Proceedings Of The National Academy Of Sciences Of The United States Of America 2001, 98: 7546-7551. PMID: 11404467, PMCID: PMC34705, DOI: 10.1073/pnas.131057498.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsBacterial ProteinsDNA MethylationDNA ReplicationDNA, BacterialDNA, ComplementaryEnterobacteriaceaeEscherichia coliGenome, BacterialMolecular Sequence DataNucleic Acid HybridizationOligonucleotide Array Sequence AnalysisProtein BiosynthesisSymbiosisTranscription, GeneticTsetse FliesConceptsObligate endosymbiontsComplete genome sequence dataGene arrayBiosynthesis of cofactorsE. coli genesGenome sequence dataTsetse fliesFacultative anaerobic organismsObligate symbiontsOrthologous genesWigglesworthia glossinidiaSmall genomesGenome sizeSymbiotic associationGenome informationDNA replicationRelated organismsColi geneSymbiotic lifeSequence dataWigglesworthiaGene productsExpression analysisTransport proteinsExpression profilesMicrosatellite Polymorphism in Tsetse Flies (Diptera: Glossinidae)
Luna C, Bonizzoni M, Cheng Q, Robinson A, Aksoy S, Zheng L. Microsatellite Polymorphism in Tsetse Flies (Diptera: Glossinidae). Journal Of Medical Entomology 2001, 38: 376-381. PMID: 11372961, DOI: 10.1603/0022-2585-38.3.376.Peer-Reviewed Original ResearchMeSH KeywordsAllelesAnimalsBase SequenceDNA PrimersDNA, ComplementaryGenes, InsectMicrosatellite RepeatsMolecular Sequence DataPolymorphism, GeneticTsetse FliesConceptsTsetse fliesCertain wild populationsPolymorphic microsatellite lociVectors of trypanosomesG. austeni NewsteadWild populationsMicrosatellite lociIntraspecific variationGenetic variabilityMicrosatellite markersField populationsSubpopulation structureVectorial capacityLociFliesMicrosatellite polymorphismCausative agentMolecular characterization of two serine proteases expressed in gut tissue of the African trypanosome vector, Glossina morsitans morsitans
Yan J, Cheng Q, Li C, Aksoy S. Molecular characterization of two serine proteases expressed in gut tissue of the African trypanosome vector, Glossina morsitans morsitans. Insect Molecular Biology 2001, 10: 47-56. PMID: 11240636, DOI: 10.1046/j.1365-2583.2001.00232.x.Peer-Reviewed Original ResearchConceptsSerine proteasesSerine protease-encoding genePutative mature proteinHydrophobic signal peptide sequenceInvertebrate serine proteasesProtease-encoding genesPost-transcriptional levelAmino acid mature peptideGut tissueSer catalytic triadSignal peptide sequenceRegulation of expressionPattern of expressionSerine protease 1Insect gutMature proteinVector insectsDeduced peptideChymotrypsin-like proteaseTsetse genomeSpecific residuesCatalytic triadAfrican trypanosomesMature peptidePathogen establishment
2000
A family of genes with growth factor and adenosine deaminase similarity are preferentially expressed in the salivary glands of Glossina m. morsitans
Li S, Aksoy S. A family of genes with growth factor and adenosine deaminase similarity are preferentially expressed in the salivary glands of Glossina m. morsitans. Gene 2000, 252: 83-93. PMID: 10903440, DOI: 10.1016/s0378-1119(00)00226-2.Peer-Reviewed Original ResearchMeSH KeywordsAdenosine DeaminaseAmino Acid SequenceAnimalsBase SequenceBlotting, NorthernBlotting, SouthernDNADNA, ComplementaryFemaleGene Expression RegulationGene Expression Regulation, DevelopmentalGrowth SubstancesMaleMolecular Sequence DataRNA, MessengerSalivaSalivary GlandsSequence Analysis, DNASpecies SpecificityTissue DistributionTsetse FliesConceptsOpen reading frameFemale adult fliesDeduced protein sequenceSignal peptide characteristicDifferent fly tissuesFamily of genesFull-length cDNAAmino acid identityLarval developmental stagesRegulation of expressionN-terminal regionGrowth factorAmino acid residuesTissues of adultAnalysis of proteinsGenomic arrangementPutative proteinFly tissuesSarcophaga peregrinaAcid identityHydrophobic sequenceCDNA libraryReading frameAdult fliesProtein sequences
1999
Concordant Evolution of a Symbiont with Its Host Insect Species: Molecular Phylogeny of Genus Glossina and Its Bacteriome-Associated Endosymbiont, Wigglesworthia glossinidia
Chen X, Li S, Aksoy S. Concordant Evolution of a Symbiont with Its Host Insect Species: Molecular Phylogeny of Genus Glossina and Its Bacteriome-Associated Endosymbiont, Wigglesworthia glossinidia. Journal Of Molecular Evolution 1999, 48: 49-58. PMID: 9873076, DOI: 10.1007/pl00006444.Peer-Reviewed Original ResearchConceptsHost insect speciesRDNA sequence analysisInsect speciesGroup speciesSequence analysisSister-group relationshipSpacer 2 (ITS2) regionParasitic African trypanosomesWigglesworthia glossinidiaMolecular phylogenyDifferentiated epithelial cellsGlossina austeniPrimary symbiontSecondary symbiontsSymbiotic associationDistinct lineagesRibosomal DNAGenus WolbachiaSymbiotic organismsTaxonomic placementΓ-subdivisionITS-2Third organismMidgut cellsAfrican trypanosomes
1998
Tsetse thrombin inhibitor: Bloodmeal-induced expression of an anticoagulant in salivary glands and gut tissue of Glossina morsitans morsitans
Cappello M, Li S, Chen X, Li C, Harrison L, Narashimhan S, Beard C, Aksoy S. Tsetse thrombin inhibitor: Bloodmeal-induced expression of an anticoagulant in salivary glands and gut tissue of Glossina morsitans morsitans. Proceedings Of The National Academy Of Sciences Of The United States Of America 1998, 95: 14290-14295. PMID: 9826693, PMCID: PMC24366, DOI: 10.1073/pnas.95.24.14290.Peer-Reviewed Original ResearchMeSH KeywordsAmino Acid SequenceAnimalsAnticoagulantsAntithrombin ProteinsAntithrombinsBase SequenceBloodCloning, MolecularDigestive SystemDNA, ComplementaryEatingEscherichia coliFemaleGene Expression RegulationInsect ProteinsMaleMolecular Sequence DataPupaRecombinant ProteinsRNA, MessengerSalivary GlandsThrombinTranscription, GeneticTsetse FliesConceptsTsetse thrombin inhibitorPutative secretory signal peptideNative proteinGlossina morsitans morsitansFull-length cDNADegenerate oligonucleotide probeSecretory signal peptideSalivary gland cDNA libraryLack of homologyMorsitans morsitansUntranslated segmentSignal peptideInhibitor geneCDNA librarySingle copyTsetse genomeAdult tsetse fliesFamily of moleculesSegment codesEscherichia coliOptimal inhibitory activityOligonucleotide probesTsetse fliesSalivary glandsGut tissue
1993
Phylogenetically distant symbiotic microorganisms reside in Glossina midgut and ovary tissues
O'NEILL S, GOODING R, AKSOY S. Phylogenetically distant symbiotic microorganisms reside in Glossina midgut and ovary tissues. Medical And Veterinary Entomology 1993, 7: 377-383. PMID: 8268495, DOI: 10.1111/j.1365-2915.1993.tb00709.x.Peer-Reviewed Original ResearchMeSH KeywordsAnimalsBase SequenceDNA PrimersDNA, BacterialFemaleIntestinesMolecular Sequence DataOvaryPhylogenyPolymerase Chain ReactionRickettsiaceaeSymbiosisTsetse FliesConceptsIntracellular bacterial symbiontsBlood-feeding insectsDNA oligonucleotide primersBacterial symbiontsSymbiotic microorganismsAlpha subdivisionSymbiotic bacteriaGamma subdivisionGenus WolbachiaGlossina speciesPolymerase chain reactionOvary tissuesOligonucleotide primersTsetse fliesMidgutSpeciesSymbiontsInsectsWolbachiaProteobacteriaSubspeciesChain reactionFliesMicroorganismsTissue
1992
Spliced leader RNA sequences of Trypanosoma rangeli are organized within the 5S rRNA-encoding genes
Aksoy S, Shay G, Villaneuva M, Beard C, Richards F. Spliced leader RNA sequences of Trypanosoma rangeli are organized within the 5S rRNA-encoding genes. Gene 1992, 113: 239-243. PMID: 1572544, DOI: 10.1016/0378-1119(92)90401-a.Peer-Reviewed Original ResearchSpliced leader RNA and 5S rRNA genes in Herpetomonas spp. are genetically linked
Aksoy S. Spliced leader RNA and 5S rRNA genes in Herpetomonas spp. are genetically linked. Nucleic Acids Research 1992, 20: 913-913. PMID: 1542583, PMCID: PMC312040, DOI: 10.1093/nar/20.4.913.Peer-Reviewed Original Research
1990
SLACS retrotransposon from Trypanosoma brucei gambiense is similar to mammalian LINEs
Aksoy S, Williams S, Chang S, Richards F. SLACS retrotransposon from Trypanosoma brucei gambiense is similar to mammalian LINEs. Nucleic Acids Research 1990, 18: 785-792. PMID: 2156231, PMCID: PMC330328, DOI: 10.1093/nar/18.4.785.Peer-Reviewed Original Research